Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2289
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 105 8e-23
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 105 8e-23
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 105 8e-23
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 105 8e-23
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 105 8e-23
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 105 8e-23
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 105 8e-23
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 103 3e-22
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 85 2e-16
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 105 bits (253), Expect = 8e-23
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = +2
Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAAYSTGLLLAXRLXXRXXXXX 379
+D+ C +AY+RIEGD IVCAAY+HELP+YGV VGLTNYAAAY TGLLLA RL R
Sbjct: 58 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 117
Query: 380 XXXXXXXXXXXEYNVEPVDNGPXAF 454
EYNVE +D P AF
Sbjct: 118 IYEGQVEVTGDEYNVESIDGQPGAF 142
Score = 85.0 bits (201), Expect = 2e-16
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = +1
Query: 73 YQVKFKRRREGKTDYYARKRLVVHDKNKYNTPKYRLIXRISNK 201
YQVKF+RRREGKTDYYARKRLV+ DKNKYNTPKYR+I R++N+
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNR 58
Score = 46.0 bits (104), Expect = 9e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 405 QVMNTMLNLSTMDXEHS--TCYLDVGLARTTTGXRXFGALKG 524
+V N+ ++D + TCYLD GLARTTTG + FGALKG
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 105 bits (253), Expect = 8e-23
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = +2
Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAAYSTGLLLAXRLXXRXXXXX 379
+D+ C +AY+RIEGD IVCAAY+HELP+YGV VGLTNYAAAY TGLLLA RL R
Sbjct: 58 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 117
Query: 380 XXXXXXXXXXXEYNVEPVDNGPXAF 454
EYNVE +D P AF
Sbjct: 118 IYEGQVEVTGDEYNVESIDGQPGAF 142
Score = 85.0 bits (201), Expect = 2e-16
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = +1
Query: 73 YQVKFKRRREGKTDYYARKRLVVHDKNKYNTPKYRLIXRISNK 201
YQVKF+RRREGKTDYYARKRLV+ DKNKYNTPKYR+I R++N+
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNR 58
Score = 46.0 bits (104), Expect = 9e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 405 QVMNTMLNLSTMDXEHS--TCYLDVGLARTTTGXRXFGALKG 524
+V N+ ++D + TCYLD GLARTTTG + FGALKG
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 105 bits (253), Expect = 8e-23
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = +2
Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAAYSTGLLLAXRLXXRXXXXX 379
+D+ C +AY+RIEGD IVCAAY+HELP+YGV VGLTNYAAAY TGLLLA RL R
Sbjct: 58 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 117
Query: 380 XXXXXXXXXXXEYNVEPVDNGPXAF 454
EYNVE +D P AF
Sbjct: 118 IYEGQVEVTGDEYNVESIDGQPGAF 142
Score = 85.0 bits (201), Expect = 2e-16
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = +1
Query: 73 YQVKFKRRREGKTDYYARKRLVVHDKNKYNTPKYRLIXRISNK 201
YQVKF+RRREGKTDYYARKRLV+ DKNKYNTPKYR+I R++N+
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNR 58
Score = 46.0 bits (104), Expect = 9e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 405 QVMNTMLNLSTMDXEHS--TCYLDVGLARTTTGXRXFGALKG 524
+V N+ ++D + TCYLD GLARTTTG + FGALKG
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 105 bits (253), Expect = 8e-23
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = +2
Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAAYSTGLLLAXRLXXRXXXXX 379
+D+ C +AY+RIEGD IVCAAY+HELP+YGV VGLTNYAAAY TGLLLA RL R
Sbjct: 8 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 67
Query: 380 XXXXXXXXXXXEYNVEPVDNGPXAF 454
EYNVE +D P AF
Sbjct: 68 IYEGQVEVTGDEYNVESIDGQPGAF 92
Score = 46.0 bits (104), Expect = 9e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 405 QVMNTMLNLSTMDXEHS--TCYLDVGLARTTTGXRXFGALKG 524
+V N+ ++D + TCYLD GLARTTTG + FGALKG
Sbjct: 74 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 115
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 105 bits (253), Expect = 8e-23
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = +2
Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAAYSTGLLLAXRLXXRXXXXX 379
+D+ C +AY+RIEGD IVCAAY+HELP+YGV VGLTNYAAAY TGLLLA RL R
Sbjct: 58 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 117
Query: 380 XXXXXXXXXXXEYNVEPVDNGPXAF 454
EYNVE +D P AF
Sbjct: 118 IYEGQVEVTGDEYNVESIDGQPGAF 142
Score = 85.0 bits (201), Expect = 2e-16
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = +1
Query: 73 YQVKFKRRREGKTDYYARKRLVVHDKNKYNTPKYRLIXRISNK 201
YQVKF+RRREGKTDYYARKRLV+ DKNKYNTPKYR+I R++N+
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNR 58
Score = 46.0 bits (104), Expect = 9e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 405 QVMNTMLNLSTMDXEHS--TCYLDVGLARTTTGXRXFGALKG 524
+V N+ ++D + TCYLD GLARTTTG + FGALKG
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 105 bits (253), Expect = 8e-23
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = +2
Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAAYSTGLLLAXRLXXRXXXXX 379
+D+ C +AY+RIEGD IVCAAY+HELP+YGV VGLTNYAAAY TGLLLA RL R
Sbjct: 58 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 117
Query: 380 XXXXXXXXXXXEYNVEPVDNGPXAF 454
EYNVE +D P AF
Sbjct: 118 IYEGQVEVTGDEYNVESIDGQPGAF 142
Score = 85.0 bits (201), Expect = 2e-16
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = +1
Query: 73 YQVKFKRRREGKTDYYARKRLVVHDKNKYNTPKYRLIXRISNK 201
YQVKF+RRREGKTDYYARKRLV+ DKNKYNTPKYR+I R++N+
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNR 58
Score = 46.0 bits (104), Expect = 9e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 405 QVMNTMLNLSTMDXEHS--TCYLDVGLARTTTGXRXFGALKG 524
+V N+ ++D + TCYLD GLARTTTG + FGALKG
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 105 bits (253), Expect = 8e-23
Identities = 50/85 (58%), Positives = 57/85 (67%)
Frame = +2
Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAAYSTGLLLAXRLXXRXXXXX 379
+D+ C +AY+RIEGD IVCAAY+HELP+YGV VGLTNYAAAY TGLLLA RL R
Sbjct: 65 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 124
Query: 380 XXXXXXXXXXXEYNVEPVDNGPXAF 454
EYNVE +D P AF
Sbjct: 125 IYEGQVEVTGDEYNVESIDGQPGAF 149
Score = 85.0 bits (201), Expect = 2e-16
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = +1
Query: 73 YQVKFKRRREGKTDYYARKRLVVHDKNKYNTPKYRLIXRISNK 201
YQVKF+RRREGKTDYYARKRLV+ DKNKYNTPKYR+I R++N+
Sbjct: 23 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNR 65
Score = 46.0 bits (104), Expect = 9e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 405 QVMNTMLNLSTMDXEHS--TCYLDVGLARTTTGXRXFGALKG 524
+V N+ ++D + TCYLD GLARTTTG + FGALKG
Sbjct: 131 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 172
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 103 bits (248), Expect = 3e-22
Identities = 49/85 (57%), Positives = 56/85 (65%)
Frame = +2
Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAAYSTGLLLAXRLXXRXXXXX 379
+D+ C +AY+RIEGD IVCA Y+HELP+YGV VGLTNYAAAY TGLLLA RL R
Sbjct: 58 RDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDK 117
Query: 380 XXXXXXXXXXXEYNVEPVDNGPXAF 454
EYNVE +D P AF
Sbjct: 118 IYEGQVEVTGDEYNVESIDGQPGAF 142
Score = 85.0 bits (201), Expect = 2e-16
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = +1
Query: 73 YQVKFKRRREGKTDYYARKRLVVHDKNKYNTPKYRLIXRISNK 201
YQVKF+RRREGKTDYYARKRLV+ DKNKYNTPKYR+I R++N+
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNR 58
Score = 46.0 bits (104), Expect = 9e-05
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 405 QVMNTMLNLSTMDXEHS--TCYLDVGLARTTTGXRXFGALKG 524
+V N+ ++D + TCYLD GLARTTTG + FGALKG
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 85.0 bits (201), Expect = 2e-16
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = +1
Query: 73 YQVKFKRRREGKTDYYARKRLVVHDKNKYNTPKYRLIXRISNK 201
YQVKF+RRREGKTDYYARKRLV+ DKNKYNTPKYR+I R++N+
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNR 58
Score = 74.9 bits (176), Expect = 2e-13
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +2
Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAA 322
+D+ C +AY+RIEGD IVCAAY+HELP+YGV VGLTNYAAA
Sbjct: 58 RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,611,461
Number of Sequences: 237096
Number of extensions: 1141390
Number of successful extensions: 1795
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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