Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2286
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...   126   5e-31
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.          126   5e-31
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.          126   5e-31
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.1  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   6.3  
EF588455-1|ABQ96691.1|  177|Anopheles gambiae transposase protein.     23   8.4  

>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score =  126 bits (305), Expect = 5e-31
 Identities = 53/119 (44%), Positives = 81/119 (68%)
 Frame = +3

Query: 288 NTLXTDIXIXXKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTVAVNTNLDLDLAGPXV 467
           NTL +++ +  ++  GLKV+ +G F P TG+KTG+ KT++++D V V+ + ++DL+GP V
Sbjct: 78  NTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSHDRVRVDADFNVDLSGPLV 137

Query: 468 YVAAXLNYQXWLAGVHTQFDTQKAKFSKNNFAXXYQSGDFALXTNVXNGKDXGGXIYXK 644
             +    YQ WLAG    FD+QK+K + NNFA  Y +GDF L TNV +G++ GG IY +
Sbjct: 138 NASGVAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQR 196



 Score = 58.8 bits (136), Expect = 1e-10
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +2

Query: 155 SESGVEFTSGITSNQXSGKVFGSLSSKFAXKDYGLTFTXKWNT 283
           + SGVEF++   SNQ +GKVFGSL +K+  K+YGL F+ KWNT
Sbjct: 34  TNSGVEFSTSGHSNQDTGKVFGSLETKYKVKEYGLNFSEKWNT 76



 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +1

Query: 49  MAPPYYADAW*RKANDVFSKGYHFGVFKL 135
           MAPP Y+D   ++A DVF+KGYHFG++KL
Sbjct: 1   MAPPSYSDLG-KQARDVFNKGYHFGLWKL 28


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score =  126 bits (305), Expect = 5e-31
 Identities = 53/119 (44%), Positives = 81/119 (68%)
 Frame = +3

Query: 288 NTLXTDIXIXXKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTVAVNTNLDLDLAGPXV 467
           NTL +++ +  ++  GLKV+ +G F P TG+KTG+ KT++++D V V+ + ++DL+GP V
Sbjct: 78  NTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSHDRVRVDADFNVDLSGPLV 137

Query: 468 YVAAXLNYQXWLAGVHTQFDTQKAKFSKNNFAXXYQSGDFALXTNVXNGKDXGGXIYXK 644
             +    YQ WLAG    FD+QK+K + NNFA  Y +GDF L TNV +G++ GG IY +
Sbjct: 138 NASGVAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQR 196



 Score = 58.8 bits (136), Expect = 1e-10
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +2

Query: 155 SESGVEFTSGITSNQXSGKVFGSLSSKFAXKDYGLTFTXKWNT 283
           + SGVEF++   SNQ +GKVFGSL +K+  K+YGL F+ KWNT
Sbjct: 34  TNSGVEFSTSGHSNQDTGKVFGSLETKYKVKEYGLNFSEKWNT 76



 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +1

Query: 49  MAPPYYADAW*RKANDVFSKGYHFGVFKL 135
           MAPP Y+D   ++A DVF+KGYHFG++KL
Sbjct: 1   MAPPSYSDLG-KQARDVFNKGYHFGLWKL 28


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score =  126 bits (305), Expect = 5e-31
 Identities = 53/119 (44%), Positives = 81/119 (68%)
 Frame = +3

Query: 288 NTLXTDIXIXXKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTVAVNTNLDLDLAGPXV 467
           NTL +++ +  ++  GLKV+ +G F P TG+KTG+ KT++++D V V+ + ++DL+GP V
Sbjct: 78  NTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSHDRVRVDADFNVDLSGPLV 137

Query: 468 YVAAXLNYQXWLAGVHTQFDTQKAKFSKNNFAXXYQSGDFALXTNVXNGKDXGGXIYXK 644
             +    YQ WLAG    FD+QK+K + NNFA  Y +GDF L TNV +G++ GG IY +
Sbjct: 138 NASGVAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQR 196



 Score = 58.8 bits (136), Expect = 1e-10
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +2

Query: 155 SESGVEFTSGITSNQXSGKVFGSLSSKFAXKDYGLTFTXKWNT 283
           + SGVEF++   SNQ +GKVFGSL +K+  K+YGL F+ KWNT
Sbjct: 34  TNSGVEFSTSGHSNQDTGKVFGSLETKYKVKEYGLNFSEKWNT 76



 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +1

Query: 49  MAPPYYADAW*RKANDVFSKGYHFGVFKL 135
           MAPP Y+D   ++A DVF+KGYHFG++KL
Sbjct: 1   MAPPSYSDLG-KQARDVFNKGYHFGLWKL 28


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 41  HSTWLPHTMLTLGKGRPMMSSARAITLVFSNCAPELPXSESGVEFTSGITSN 196
           HS  +PH+  +    RP  SS    T   S+  P LP + SG    +G +SN
Sbjct: 31  HSADVPHSSTSQSSRRPQHSS----TSASSSSVPTLP-TTSGEPRAAGSSSN 77


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 41  HSTWLPHTMLTLGKGRPMMSSARAITLVFSNCAPELPXSESGVEFTSGITSN 196
           HS  +PH+  +    RP  SS    T   S+  P LP + SG    +G +SN
Sbjct: 31  HSADVPHSSTSQSSRRPQHSS----TSASSSSVPTLP-TTSGEPRAAGSSSN 77


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 107 RAITLVFSNCAPELPXSESGVEFTSGITSNQXSGKVFGSLSS 232
           R++  +      ELP ++   + TS  +SNQ S     S SS
Sbjct: 161 RSLQRMLDENGGELPSNKQQQQLTSASSSNQLSNSSLCSASS 202


>EF588455-1|ABQ96691.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 563 SKVVLGELCFLCIKLGVYTSQPT 495
           S V  G  CF C+K+  YT   T
Sbjct: 17  SPVETGAKCFYCLKVFKYTKGTT 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,499
Number of Sequences: 2352
Number of extensions: 10510
Number of successful extensions: 223
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)