BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2273
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05016-1|AAA28643.1| 1156|Drosophila melanogaster hu-li tai shao... 49 7e-06
BT012349-1|AAS77474.1| 322|Drosophila melanogaster AT01058p pro... 49 7e-06
AY122245-1|AAM52757.1| 717|Drosophila melanogaster SD02552p pro... 49 7e-06
AF151708-1|AAB59182.1| 1156|Drosophila melanogaster adducin-like... 49 7e-06
AF151707-1|AAG01379.1| 495|Drosophila melanogaster adducin-like... 49 7e-06
AF151706-1|AAG01378.1| 495|Drosophila melanogaster adducin-like... 49 7e-06
AF151705-1|AAG01377.1| 718|Drosophila melanogaster adducin-like... 49 7e-06
AE013599-2879|AAM70851.2| 495|Drosophila melanogaster CG9325-PC... 49 7e-06
AE013599-2878|AAM70850.2| 668|Drosophila melanogaster CG9325-PD... 49 7e-06
AE013599-2877|AAF57565.3| 1156|Drosophila melanogaster CG9325-PA... 49 7e-06
AE013599-2876|AAN16131.1| 716|Drosophila melanogaster CG9325-PF... 49 7e-06
AE013599-2875|AAN16130.1| 716|Drosophila melanogaster CG9325-PE... 49 7e-06
AE013599-2874|AAF57566.3| 716|Drosophila melanogaster CG9325-PB... 49 7e-06
AE014296-2287|AAF49810.2| 447|Drosophila melanogaster CG10089-P... 32 0.86
X77075-1|CAA54348.1| 417|Drosophila melanogaster protein ( D.me... 31 1.5
AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB... 31 1.5
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot... 30 3.5
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot... 30 3.5
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit... 30 3.5
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit... 30 3.5
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me... 30 3.5
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE... 30 3.5
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC... 30 3.5
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB... 30 3.5
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD... 30 3.5
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA... 30 3.5
>L05016-1|AAA28643.1| 1156|Drosophila melanogaster hu-li tai shao
protein protein.
Length = 1156
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>BT012349-1|AAS77474.1| 322|Drosophila melanogaster AT01058p
protein.
Length = 322
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 56 PPKPKNDVELPPAVSSLGYLLEEE 79
>AY122245-1|AAM52757.1| 717|Drosophila melanogaster SD02552p
protein.
Length = 717
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 401 PPKPKNDVELPPAVSSLGYLLEEE 424
>AF151708-1|AAB59182.1| 1156|Drosophila melanogaster adducin-like
protein N4 isoform protein.
Length = 1156
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AF151707-1|AAG01379.1| 495|Drosophila melanogaster adducin-like
protein N32 isoform protein.
Length = 495
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AF151706-1|AAG01378.1| 495|Drosophila melanogaster adducin-like
protein R2 isoform protein.
Length = 495
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AF151705-1|AAG01377.1| 718|Drosophila melanogaster adducin-like
protein R1 isoform protein.
Length = 718
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AE013599-2879|AAM70851.2| 495|Drosophila melanogaster CG9325-PC,
isoform C protein.
Length = 495
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AE013599-2878|AAM70850.2| 668|Drosophila melanogaster CG9325-PD,
isoform D protein.
Length = 668
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AE013599-2877|AAF57565.3| 1156|Drosophila melanogaster CG9325-PA,
isoform A protein.
Length = 1156
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AE013599-2876|AAN16131.1| 716|Drosophila melanogaster CG9325-PF,
isoform F protein.
Length = 716
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AE013599-2875|AAN16130.1| 716|Drosophila melanogaster CG9325-PE,
isoform E protein.
Length = 716
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AE013599-2874|AAF57566.3| 716|Drosophila melanogaster CG9325-PB,
isoform B protein.
Length = 716
Score = 48.8 bits (111), Expect = 7e-06
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +2
Query: 305 PPRPKNDVEVPPAVSSLGYLLDQQ 376
PP+PKNDVE+PPAVSSLGYLL+++
Sbjct: 402 PPKPKNDVELPPAVSSLGYLLEEE 425
>AE014296-2287|AAF49810.2| 447|Drosophila melanogaster CG10089-PD,
isoform D protein.
Length = 447
Score = 31.9 bits (69), Expect = 0.86
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 263 RRTQRRSRTAPDPCPPRPKNDVEVPPAVSSLGYLLDQQMHEGGDAPLLQRIKEMVGG 433
R+ Q++ + + PRP N P VSS G + EG + LQR V G
Sbjct: 300 RQLQQQQQLSRSQRSPRPVNSSREAPRVSSAGSRRESAAREGNGSAQLQRSASTVSG 356
>X77075-1|CAA54348.1| 417|Drosophila melanogaster protein (
D.melanogaster SCR gene exon1. ).
Length = 417
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 586 NQNKSTSRVHGGPACXGSIXXPLFIPYAFDTSDVVDRQNAARTPEASG 443
N N S SRV GGP G++ P+ P D+ D N A + + SG
Sbjct: 251 NNNHSGSRVSGGP---GNVNVPMHSPGGGDSDSESDSGNEAGSSQNSG 295
>AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB,
isoform B protein.
Length = 409
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 459 PLRLPVCSLPPTISLILCRSGASPPSCI 376
P + P C+LPPT C S +PP CI
Sbjct: 325 PCKEPGCTLPPTCWPPYCPSPCTPPMCI 352
>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
trxI protein.
Length = 3358
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 337 QPRLQFQADNQQATFAAPKACPTSPSAIPKPANSLATSSFGSLA 380
>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
trxII protein.
Length = 3726
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 705 QPRLQFQADNQQATFAAPKACPTSPSAIPKPANSLATSSFGSLA 748
>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted
trithorax protein protein.
Length = 3358
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 337 QPRLQFQADNQQATFAAPKACPTSPSAIPKPANSLATSSFGSLA 380
>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted
trithorax protein protein.
Length = 3726
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 705 QPRLQFQADNQQATFAAPKACPTSPSAIPKPANSLATSSFGSLA 748
>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
D.melanogaster zinc-binding protein (trithorax) mRNA,
complete cds. ).
Length = 3759
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 705 QPRLQFQADNQQATFAAPKACPTSPSAIPKPANSLATSSFGSLA 748
>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
isoform E protein.
Length = 3358
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 337 QPRLQFQADNQQATFTAPKACPTSPSAIPKPANSLATSSFGSLA 380
>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
isoform C protein.
Length = 3358
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 337 QPRLQFQADNQQATFTAPKACPTSPSAIPKPANSLATSSFGSLA 380
>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
isoform B protein.
Length = 3358
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 337 QPRLQFQADNQQATFTAPKACPTSPSAIPKPANSLATSSFGSLA 380
>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
isoform D protein.
Length = 3726
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 705 QPRLQFQADNQQATFTAPKACPTSPSAIPKPANSLATSSFGSLA 748
>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
isoform A protein.
Length = 3726
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 672 RPRGKXQAXAXRTVFRXXVXCPVTPGLCPTKTNRLAGYTAGQLA 541
+PR + QA + F CP +P P N LA + G LA
Sbjct: 705 QPRLQFQADNQQATFTAPKACPTSPSAIPKPANSLATSSFGSLA 748
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,241,204
Number of Sequences: 53049
Number of extensions: 704178
Number of successful extensions: 2673
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2670
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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