Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2272
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   159   9e-41
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   3.4  
AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB prot...    23   7.8  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  159 bits (385), Expect = 9e-41
 Identities = 75/84 (89%), Positives = 79/84 (94%)
 Frame = +2

Query: 236 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 415
           IEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEE 76

Query: 416 ERERRDNYVPEVSALEHDIIE*TP 487
           ERERRDNYVP+VSALE DIIE  P
Sbjct: 77  ERERRDNYVPDVSALEQDIIEVDP 100



 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +1

Query: 478 IDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGR 579
           +DP+TK+MLK LDFNNI  +QLT P T  GY  R
Sbjct: 98  VDPETKEMLKHLDFNNI-VVQLTNP-TAPGYSNR 129


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +3

Query: 366 VSDTRKCEESLSNFRKRSVRGVTTMSQKCLLSNMTS 473
           +++TR C E++S F+    R   T+ +K  + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391


>AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB
           protein.
          Length = 60

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 234 IIFAAFLTVLVRTRPMAEVVPRAEFGTRSPSKGRKTVRS 118
           I+ A  + V+V  +P+ +  PR +FG R    GR   R+
Sbjct: 8   ILVAIAVLVVVGVQPV-DGAPRWKFGKRLEKLGRNVFRA 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,225
Number of Sequences: 2352
Number of extensions: 11499
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)