Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2272
(620 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22142-1|AAA28869.1| 131|Drosophila melanogaster protein ( D.me... 156 3e-38
BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p pro... 156 3e-38
AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal pr... 156 3e-38
AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB... 156 3e-38
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 32 0.72
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 32 0.72
AE014296-3755|AAF51888.2| 708|Drosophila melanogaster CG32458-P... 30 2.2
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein. 30 2.9
AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB... 30 2.9
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ... 30 2.9
AY051865-1|AAK93289.1| 793|Drosophila melanogaster LD36057p pro... 29 6.7
AE014297-336|AAF51966.1| 793|Drosophila melanogaster CG2102-PA ... 29 6.7
>M22142-1|AAA28869.1| 131|Drosophila melanogaster protein (
D.melanogaster ribosomalprotein S17 gene, complete cds.
).
Length = 131
Score = 156 bits (378), Expect = 3e-38
Identities = 74/81 (91%), Positives = 76/81 (93%)
Frame = +2
Query: 236 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 415
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 416 ERERRDNYVPEVSALEHDIIE 478
ERERRDNYVP VSALE DIIE
Sbjct: 77 ERERRDNYVPAVSALEQDIIE 97
Score = 48.0 bits (109), Expect = 1e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 478 IDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGR 579
+D DTK+MLK+LDF+NI GLQLTQP T +G R
Sbjct: 98 VDADTKEMLKLLDFHNIRGLQLTQPNT-NNFGRR 130
>BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p
protein.
Length = 131
Score = 156 bits (378), Expect = 3e-38
Identities = 74/81 (91%), Positives = 76/81 (93%)
Frame = +2
Query: 236 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 415
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 416 ERERRDNYVPEVSALEHDIIE 478
ERERRDNYVP VSALE DIIE
Sbjct: 77 ERERRDNYVPAVSALEQDIIE 97
Score = 48.0 bits (109), Expect = 1e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 478 IDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGR 579
+D DTK+MLK+LDF+NI GLQLTQP T +G R
Sbjct: 98 VDADTKEMLKLLDFHNIRGLQLTQPNT-NNFGRR 130
>AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal
protein S17 protein.
Length = 131
Score = 156 bits (378), Expect = 3e-38
Identities = 74/81 (91%), Positives = 76/81 (93%)
Frame = +2
Query: 236 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 415
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 416 ERERRDNYVPEVSALEHDIIE 478
ERERRDNYVP VSALE DIIE
Sbjct: 77 ERERRDNYVPAVSALEQDIIE 97
Score = 48.0 bits (109), Expect = 1e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 478 IDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGR 579
+D DTK+MLK+LDF+NI GLQLTQP T +G R
Sbjct: 98 VDADTKEMLKLLDFHNIRGLQLTQPNT-NNFGRR 130
>AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB
protein.
Length = 131
Score = 156 bits (378), Expect = 3e-38
Identities = 74/81 (91%), Positives = 76/81 (93%)
Frame = +2
Query: 236 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 415
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 416 ERERRDNYVPEVSALEHDIIE 478
ERERRDNYVP VSALE DIIE
Sbjct: 77 ERERRDNYVPAVSALEQDIIE 97
Score = 48.0 bits (109), Expect = 1e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 478 IDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGR 579
+D DTK+MLK+LDF+NI GLQLTQP T +G R
Sbjct: 98 VDADTKEMLKLLDFHNIRGLQLTQPNT-NNFGRR 130
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 31.9 bits (69), Expect = 0.72
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2
Query: 148 PVKGKEDSKKLPAVPESVLKHRKRREALR 62
PV K +KKLPAVPES LK K++ + R
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKR 32
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 31.9 bits (69), Expect = 0.72
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2
Query: 148 PVKGKEDSKKLPAVPESVLKHRKRREALR 62
PV K +KKLPAVPES LK K++ + R
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKR 32
>AE014296-3755|AAF51888.2| 708|Drosophila melanogaster CG32458-PA
protein.
Length = 708
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 30 CHQEEEGNLLVRRASLLLRCLSTDSGTAGSFLLSSFPLTGSSCRIRHE 173
C Q + G+ +R AS C+S D+ + +++S+ P S +E
Sbjct: 346 CEQHQLGHQSLRPASTPSECISLDTSSRSEYIMSTVPAQSDSVETPNE 393
>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
Length = 2483
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 169 CRIRHEEPVKGKEDSKKLPAVPESVLKHRKRREALRTRR 53
C++ E+P K +K L A+P+ V+K+R+ E R RR
Sbjct: 483 CQLDEEQPCTSKMAAKSLGAIPK-VVKYREVDELRRRRR 520
>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
EG:30B8.4,FBgn0003048;pcx protein.
Length = 3345
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 169 CRIRHEEPVKGKEDSKKLPAVPESVLKHRKRREALRTRR 53
C++ E+P K +K L A+P+ V+K+R+ E R RR
Sbjct: 936 CQLDEEQPCTSKMAAKSLGAIPK-VVKYREVDELRRRRR 973
>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
protein.
Length = 3433
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 169 CRIRHEEPVKGKEDSKKLPAVPESVLKHRKRREALRTRR 53
C++ E+P K +K L A+P+ V+K+R+ E R RR
Sbjct: 947 CQLDEEQPCTSKMAAKSLGAIPK-VVKYREVDELRRRRR 984
>AY051865-1|AAK93289.1| 793|Drosophila melanogaster LD36057p
protein.
Length = 793
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 157 HEEPVKGKEDSKKLPAVPESVLKHRKRREALRT--RRFPSS 41
HEEP +GK SKK + + H+KR+E+L+ RF SS
Sbjct: 380 HEEPCQGKILSKK-DDIIRHLKWHKKRKESLKLGFARFSSS 419
>AE014297-336|AAF51966.1| 793|Drosophila melanogaster CG2102-PA
protein.
Length = 793
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 157 HEEPVKGKEDSKKLPAVPESVLKHRKRREALRT--RRFPSS 41
HEEP +GK SKK + + H+KR+E+L+ RF SS
Sbjct: 380 HEEPCQGKILSKK-DDIIRHLKWHKKRKESLKLGFARFSSS 419
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,586,337
Number of Sequences: 53049
Number of extensions: 513738
Number of successful extensions: 1471
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -