Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2262
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC056882-1|AAH56882.1| 386|Homo sapiens CUEDC1 protein protein. 76 1e-13
AK000746-1|BAA91357.1| 386|Homo sapiens protein ( Homo sapiens ... 76 1e-13
AK000977-1|BAA91452.1| 358|Homo sapiens protein ( Homo sapiens ... 74 6e-13
CR533477-1|CAG38508.1| 274|Homo sapiens TOLLIP protein. 38 0.039
BC018272-1|AAH18272.1| 274|Homo sapiens toll interacting protei... 38 0.039
BC012057-1|AAH12057.1| 274|Homo sapiens toll interacting protei... 38 0.039
BC004420-1|AAH04420.1| 274|Homo sapiens toll interacting protei... 38 0.039
AY730683-1|AAX22229.1| 274|Homo sapiens toll interacting protei... 38 0.039
AK096693-1|BAC04844.1| 213|Homo sapiens protein ( Homo sapiens ... 38 0.039
AK022871-1|BAB14283.1| 205|Homo sapiens protein ( Homo sapiens ... 38 0.039
AJ242972-1|CAB58118.1| 273|Homo sapiens TOLLIP protein protein. 38 0.039
BC002372-1|AAH02372.1| 463|Homo sapiens zinc finger protein 207... 35 0.27
AF046001-1|AAC78561.1| 478|Homo sapiens ZNF207 protein. 35 0.27
AB209215-1|BAD92452.1| 496|Homo sapiens zinc finger protein 207... 35 0.27
AB209541-1|BAD92778.1| 352|Homo sapiens toll interacting protei... 33 1.1
>BC056882-1|AAH56882.1| 386|Homo sapiens CUEDC1 protein protein.
Length = 386
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = +1
Query: 256 QLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
+LEF QAM+DFKTMFP+MD D+IE VLRAN GAVDATIDQLL M+ +
Sbjct: 44 RLEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLE 90
>AK000746-1|BAA91357.1| 386|Homo sapiens protein ( Homo sapiens
cDNA FLJ20739 fis, clone HEP07341. ).
Length = 386
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = +1
Query: 256 QLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
+LEF QAM+DFKTMFP+MD D+IE VLRAN GAVDATIDQLL M+ +
Sbjct: 44 RLEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLE 90
>AK000977-1|BAA91452.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ10115 fis, clone HEMBA1002777. ).
Length = 358
Score = 73.7 bits (173), Expect = 6e-13
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +1
Query: 256 QLEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
+LE QAM+DFKTMFP+MD D+IE VLRAN GAVDATIDQLL M+ +
Sbjct: 44 RLELNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLE 90
>CR533477-1|CAG38508.1| 274|Homo sapiens TOLLIP protein.
Length = 274
Score = 37.9 bits (84), Expect = 0.039
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 295 MFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
MFP+MD +VI +VL A +G DA I+ LL M +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273
>BC018272-1|AAH18272.1| 274|Homo sapiens toll interacting protein
protein.
Length = 274
Score = 37.9 bits (84), Expect = 0.039
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 295 MFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
MFP+MD +VI +VL A +G DA I+ LL M +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273
>BC012057-1|AAH12057.1| 274|Homo sapiens toll interacting protein
protein.
Length = 274
Score = 37.9 bits (84), Expect = 0.039
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 295 MFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
MFP+MD +VI +VL A +G DA I+ LL M +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273
>BC004420-1|AAH04420.1| 274|Homo sapiens toll interacting protein
protein.
Length = 274
Score = 37.9 bits (84), Expect = 0.039
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 295 MFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
MFP+MD +VI +VL A +G DA I+ LL M +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273
>AY730683-1|AAX22229.1| 274|Homo sapiens toll interacting protein
protein.
Length = 274
Score = 37.9 bits (84), Expect = 0.039
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 295 MFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
MFP+MD +VI +VL A +G DA I+ LL M +
Sbjct: 240 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 273
>AK096693-1|BAC04844.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ39374 fis, clone PEBLM2008576, highly similar to
Homo sapiens mRNA for TOLLIP protein. ).
Length = 213
Score = 37.9 bits (84), Expect = 0.039
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 295 MFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
MFP+MD +VI +VL A +G DA I+ LL M +
Sbjct: 179 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 212
>AK022871-1|BAB14283.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ12809 fis, clone NT2RP2002408, highly similar to
Homo sapiens mRNA for TOLLIP protein. ).
Length = 205
Score = 37.9 bits (84), Expect = 0.039
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 295 MFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
MFP+MD +VI +VL A +G DA I+ LL M +
Sbjct: 171 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 204
>AJ242972-1|CAB58118.1| 273|Homo sapiens TOLLIP protein protein.
Length = 273
Score = 37.9 bits (84), Expect = 0.039
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 295 MFPDMDDDVIEAVLRANQGAVDATIDQLLAMSTD 396
MFP+MD +VI +VL A +G DA I+ LL M +
Sbjct: 239 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGEE 272
>BC002372-1|AAH02372.1| 463|Homo sapiens zinc finger protein 207
protein.
Length = 463
Score = 35.1 bits (77), Expect = 0.27
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +1
Query: 316 DVIEAVLRANQGAVDATID--QLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNTRPAD 489
+ I+AV A G D ++ + + + +E RL ++ + + K++D +D
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQD-----DSD 114
Query: 490 ECDDDDTAALVNVEDESVPLAVRKRWIPRMLGP-LPPM 600
E DDDD+AA + + + P+ ++ +IP M P LPP+
Sbjct: 115 EYDDDDSAASTSFQPQ--PVQPQQGYIPPMAQPGLPPV 150
>AF046001-1|AAC78561.1| 478|Homo sapiens ZNF207 protein.
Length = 478
Score = 35.1 bits (77), Expect = 0.27
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +1
Query: 316 DVIEAVLRANQGAVDATID--QLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNTRPAD 489
+ I+AV A G D ++ + + + +E RL ++ + + K++D +D
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQD-----DSD 114
Query: 490 ECDDDDTAALVNVEDESVPLAVRKRWIPRMLGP-LPPM 600
E DDDD+AA + + + P+ ++ +IP M P LPP+
Sbjct: 115 EYDDDDSAASTSFQPQ--PVQPQQGYIPPMAQPGLPPV 150
>AB209215-1|BAD92452.1| 496|Homo sapiens zinc finger protein 207
variant protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.27
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +1
Query: 316 DVIEAVLRANQGAVDATID--QLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNTRPAD 489
+ I+AV A G D ++ + + + +E RL ++ + + K++D +D
Sbjct: 63 ETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQD-----DSD 117
Query: 490 ECDDDDTAALVNVEDESVPLAVRKRWIPRMLGP-LPPM 600
E DDDD+AA + + + P+ ++ +IP M P LPP+
Sbjct: 118 EYDDDDSAASTSFQPQ--PVQPQQGYIPPMAQPGLPPV 153
>AB209541-1|BAD92778.1| 352|Homo sapiens toll interacting protein
variant protein.
Length = 352
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 295 MFPDMDDDVIEAVLRANQGAVDATIDQLLAM 387
MFP+MD +VI +VL A +G DA I L +
Sbjct: 271 MFPNMDQEVIRSVLEAQRGNKDAAIPSHLVL 301
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,865,923
Number of Sequences: 237096
Number of extensions: 2116646
Number of successful extensions: 5685
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5682
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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