Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2262
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical ... 34 0.12
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 33 0.29
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 32 0.50
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 32 0.50
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 32 0.50
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 32 0.50
AF003140-6|AAD47122.2| 1145|Caenorhabditis elegans Hypothetical ... 31 0.66
U32305-4|AAK18861.1| 139|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical pr... 30 2.0
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 29 3.5
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical... 28 6.2
Z48178-8|CAD54121.1| 214|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL033514-37|CAA22087.2| 441|Caenorhabditis elegans Hypothetical... 28 8.1
>Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical
protein F43C1.5 protein.
Length = 221
Score = 44.8 bits (101), Expect = 7e-05
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Frame = +1
Query: 259 LEFTQAMNDFKTMFPDMDDDVIEAVLRANQGAVDATIDQLL---------AMSTDNQNEL 411
L+F +AM DF+ MFP + + IE VLR G V ATI++LL + S + +L
Sbjct: 19 LDFDRAMLDFQAMFPSLSNSHIEYVLRKYDGDVSATINELLYDNTPTTTTSESIPHGGDL 78
Query: 412 LRLEMERVESNTPSKRKDRRNTRPADECDDDDTAALVNVEDESVPLAVRKRWIPRML 582
+L R E N K R N + D D + A ED+ + L + R + ++
Sbjct: 79 TKLRQRRHEIN----EKLRENQKFLDTVTDVEIARA--YEDQQLALLLEHREVNTLI 129
>AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical
protein Y46H3C.4 protein.
Length = 616
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 82 QRRVV--CLEDGQCRHGVDPLRHCGSPAS*IS*ATGKGLALVTSLTDRVPLVGGAMASTM 255
QR+V+ C + +HGV + G A + G+ +L+T++ GG +++
Sbjct: 93 QRKVLFACFKRSD-KHGVKVAQLAGGVADMSAYHHGEQ-SLMTTIVHLAQDYGGKDSASA 150
Query: 256 QLEFTQAMNDFKTMFPDMDDDVIEAVLRANQ 348
Q FTQ +T+FP DD+V+ + NQ
Sbjct: 151 QYIFTQLSPVTRTLFPSHDDNVLRFLYEENQ 181
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 322 IEAVLRANQGAVDATIDQLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNTRPADECDD 501
+ + R A + +D ++ +D E L + R + P +R RRN R D+ DD
Sbjct: 658 VSEISRRAGTAPSSQLDMIMGEESDESQEALTIRAPRQRAKRPIERVSRRNRR--DQSDD 715
Query: 502 D 504
D
Sbjct: 716 D 716
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 31.9 bits (69), Expect = 0.50
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +1
Query: 298 FPDMDDDVIEAVLRANQGAVDATIDQLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNT 477
F + DD +IE AV+ I+ T+NQ L + ER++ N + ++ +
Sbjct: 167 FDETDDIIIEEEAVEEAEAVEPPIN------TENQENALEMLEERLKKNEEKEIVEKSDV 220
Query: 478 RPADECDDDDTAALVNVEDESVPLAVRKR 564
+P DE ++++E +SV + RKR
Sbjct: 221 KPEDE-------DIIHMETDSVETSSRKR 242
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 31.9 bits (69), Expect = 0.50
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +1
Query: 298 FPDMDDDVIEAVLRANQGAVDATIDQLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNT 477
F + DD +IE AV+ I+ T+NQ L + ER++ N + ++ +
Sbjct: 204 FDETDDIIIEEEAVEEAEAVEPPIN------TENQENALEMLEERLKKNEEKEIVEKSDV 257
Query: 478 RPADECDDDDTAALVNVEDESVPLAVRKR 564
+P DE ++++E +SV + RKR
Sbjct: 258 KPEDE-------DIIHMETDSVETSSRKR 279
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 31.9 bits (69), Expect = 0.50
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +1
Query: 298 FPDMDDDVIEAVLRANQGAVDATIDQLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNT 477
F + DD +IE AV+ I+ T+NQ L + ER++ N + ++ +
Sbjct: 204 FDETDDIIIEEEAVEEAEAVEPPIN------TENQENALEMLEERLKKNEEKEIVEKSDV 257
Query: 478 RPADECDDDDTAALVNVEDESVPLAVRKR 564
+P DE ++++E +SV + RKR
Sbjct: 258 KPEDE-------DIIHMETDSVETSSRKR 279
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 31.9 bits (69), Expect = 0.50
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +1
Query: 298 FPDMDDDVIEAVLRANQGAVDATIDQLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNT 477
F + DD +IE AV+ I+ T+NQ L + ER++ N + ++ +
Sbjct: 204 FDETDDIIIEEEAVEEAEAVEPPIN------TENQENALEMLEERLKKNEEKEIVEKSDV 257
Query: 478 RPADECDDDDTAALVNVEDESVPLAVRKR 564
+P DE ++++E +SV + RKR
Sbjct: 258 KPEDE-------DIIHMETDSVETSSRKR 279
>AF003140-6|AAD47122.2| 1145|Caenorhabditis elegans Hypothetical
protein C44E4.7 protein.
Length = 1145
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Frame = +1
Query: 262 EFTQAMNDFKTMFPDMDDD---VIEAVLRANQGAVDATIDQLLAM-STDNQNELLRLEME 429
E A+ND + F ++ DD ++EAV ANQ A+ T ++L + S ++ ++++ E E
Sbjct: 903 ELKSALNDVQEEFKEVQDDLEQILEAVDFANQKALQVTEERLAVLESFNDMDDVIISEKE 962
Query: 430 R 432
+
Sbjct: 963 K 963
>U32305-4|AAK18861.1| 139|Caenorhabditis elegans Hypothetical
protein B0336.13 protein.
Length = 139
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 334 LRANQGAVDATIDQLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNTRPADECDDDDT 510
L+ Q + D ID+L ++ D + L ++ + + PSKR +R + A + +DDD+
Sbjct: 83 LKDPQRSFDEPIDKLKVVACDGRQTSL---LQTLSAQGPSKRVNRAHAAAAGDDEDDDS 138
>Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical
protein F13B12.1 protein.
Length = 511
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 385 MSTDNQNELLRLEMERVESNTPSKRKDRRNTRPADECDDDDTAALVNVED 534
+ TD + ER S P KRK + N+R +E +DDD + D
Sbjct: 374 LDTDYSTVSRQEREERDYSRMPEKRKKKINSRDEEEPNDDDQPKRPRIRD 423
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 493 CDDDDTAALVNVEDESVPLAVRKR---WIPRMLGPLPPMFLRIPPATD 627
CDDDDT A + E+ V L K+ + R +G L P +PP TD
Sbjct: 2397 CDDDDTHASKSGEEREVDLGEGKKPIGYYVRRVGGLFP--APLPPGTD 2442
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 226 LVGGAMASTMQLEFTQAMNDFKTMFPDMDDDVIEAVLRANQ 348
L GG +++ + FTQ +T+FP DD+V+ + NQ
Sbjct: 829 LQGGKDSASARYIFTQLSPVTRTLFPAHDDNVLRFLYEENQ 869
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 226 LVGGAMASTMQLEFTQAMNDFKTMFPDMDDDVIEAVLRANQ 348
L GG +++ + FTQ +T+FP DD+V+ + NQ
Sbjct: 829 LQGGKDSASARYIFTQLSPVTRTLFPAHDDNVLRFLYEENQ 869
>Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical
protein C07G2.2c protein.
Length = 509
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1
Query: 352 AVDATIDQLLAMSTDNQNELLRLEMERV 435
A++A +QLLA+ T QN++LR E+ERV
Sbjct: 425 AMEAEKNQLLAIQT--QNQVLRRELERV 450
>Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical
protein C07G2.2b protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1
Query: 352 AVDATIDQLLAMSTDNQNELLRLEMERV 435
A++A +QLLA+ T QN++LR E+ERV
Sbjct: 376 AMEAEKNQLLAIQT--QNQVLRRELERV 401
>AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical
protein Y39G10AR.7 protein.
Length = 474
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 388 STDNQNELLRLEMERVESNTPSKRKDRRNTRPADECDDDD 507
S D +NE LR ++ER RK R DE D++D
Sbjct: 433 SDDTKNERLRQKLERHRKRENRLRKLFRRREVLDEIDEED 472
>Z48178-8|CAD54121.1| 214|Caenorhabditis elegans Hypothetical
protein C05C10.7 protein.
Length = 214
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Frame = -1
Query: 360 VYGALVCPKNSLDDIIVHIRKH----RFEV-VHRLSKFKLHSG 247
V+ +L CP+N+L+ + IR H + E+ VH++ + +H G
Sbjct: 84 VFNSLACPENNLEKSVCVIRLHDVLTKSEMGVHKMKRQLIHCG 126
>AL033514-37|CAA22087.2| 441|Caenorhabditis elegans Hypothetical
protein Y75B8A.27 protein.
Length = 441
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 325 EAVLRANQGAVDATIDQLLAMSTDNQNELLRLEMERVESNTPSKRKDRRNTRPADECDDD 504
+ LRA + VD + +N+N+ + ++E+V+ T + R+ R + + D +
Sbjct: 307 DEALRAQKEKVDVATENFEIAKKNNRNKKMMAKIEKVDEKTFATRQ-HRTKKIKETIDYE 365
Query: 505 DTAALVNVE 531
+ L+N E
Sbjct: 366 YQSMLLNYE 374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,205,603
Number of Sequences: 27780
Number of extensions: 334291
Number of successful extensions: 1005
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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