Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2257
(600 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 99 2e-22
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 57 2e-09
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 50 3e-07
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 42 7e-05
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 38 0.001
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 37 0.003
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 33 0.024
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 32 0.056
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 32 0.056
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.13
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 31 0.17
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 29 0.39
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.39
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 3.7
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 99 bits (238), Expect = 2e-22
Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +1
Query: 265 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIXDAFXXIPXXQG 441
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F +G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 442 LLSFWRGNFXNVXXYFPXXALNFXFKDKF 528
++S WRGN NV YFP ALNF FKDKF
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKF 115
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 57.2 bits (132), Expect = 2e-09
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPXXQGLLSFWR 459
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 460 GNFXNVXXYFPXXALNF 510
GN N FP A+ F
Sbjct: 78 GNGTNCLRAFPYGAVQF 94
Score = 37.1 bits (82), Expect = 0.002
Identities = 25/92 (27%), Positives = 40/92 (43%)
Frame = +1
Query: 235 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDA 414
K + AD AF K FL GG + + +T P + ++ QV + YK I A
Sbjct: 217 KFFSNADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSA 272
Query: 415 FXXIPXXQGLLSFWRGNFXNVXXYFPXXALNF 510
I +G+ F+RG N+ P ++ +
Sbjct: 273 IFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 49.6 bits (113), Expect = 3e-07
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPXXQGLLS 450
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 451 FWRGNFXNVXXYFPXXALNF 510
++G+ + FP + F
Sbjct: 78 LYQGHTATLYRVFPYAGIKF 97
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 41.9 bits (94), Expect = 7e-05
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +1
Query: 253 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPX 432
DP F++GGI+ VS+T AP++R+K++L + + + + + +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 433 XQGLLSFWRGNFXNVXXYFPXXALNF 510
G+ SF+ GN NV P ++ F
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKF 207
Score = 32.7 bits (71), Expect = 0.042
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 286 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPXXQGLLSFWRGN 465
G +S + T V P+ ++ LQ Q S A Y G D F +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 466 FXNVXXYFPXXALNF 510
N+ P A+++
Sbjct: 399 SPNLLKVAPSVAISY 413
Score = 28.3 bits (60), Expect = 0.91
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 277 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKG-IXDAFXXIPXXQGLLSF 453
+LAGG++ +V++ + P++ +K +Q +S+ Q K I + G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 454 WRGNFXNVXXYFPXXA 501
+RG + FP A
Sbjct: 288 YRGVLVGILGMFPYSA 303
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 37.9 bits (84), Expect = 0.001
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPXXQGLLSFWR 459
++GG+S A++ + P++ VK LLQ + S I ++ KG D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 460 GNFXNVXXYFPXXALNF 510
G + P A+++
Sbjct: 268 GIRPRMVVAMPATAVSW 284
Score = 30.3 bits (65), Expect = 0.22
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAADQRYKGIXDAFXXIPXXQGLLSFW 456
LAG S + + + P++ +K +Q+ + VS+ ++ + I ++ I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 457 RGNFXNVXXYFPXXALNFXFKDKF 528
RG + P A+ F + F
Sbjct: 79 RGISSVIMGAGPSHAIYFSVLEFF 102
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 277 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIXDAFXXIPXXQGLLSF 453
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 454 WRG 462
RG
Sbjct: 87 QRG 89
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 33.5 bits (73), Expect = 0.024
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 262 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPXXQ 438
+F KDFLA G+S V++ V P + VK+ LQ Q I Y D I +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 439 GLLSFWRG 462
GL +F++G
Sbjct: 70 GLAAFYKG 77
Score = 33.1 bits (72), Expect = 0.032
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 256 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPXX 435
PV + +++G IS + V P+E V++ LQ+Q K + Y G D I
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 436 QGLLSFWRG 462
GL +G
Sbjct: 164 YGLSGIMKG 172
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 32.3 bits (70), Expect = 0.056
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR---YKGIXDAFXXIPXXQG 441
KD +AGG + S VAP++ VK Q Q + G + I +G
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 442 LLSFWRGNFXNVXXYFPXXALNFXFKDK 525
+ +RG + Y P ++ F +K
Sbjct: 67 IAGLYRGVGPMMLGYLPSWSIYFVVYEK 94
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 379 AADQRYKGIXDAFXXIPXXQGLLSFWRGNFXNV 477
A Y DAF I +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 32.3 bits (70), Expect = 0.056
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPXXQGLLSFWR 459
LAGGIS+ + + +AP + +K+ +Q+ S + F +G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 460 GNFXNVXXYFPXXALNF 510
GN Y A F
Sbjct: 70 GNVVAELLYLVYGAAEF 86
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 31.1 bits (67), Expect = 0.13
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 277 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPXXQGLLSFW 456
FL G ++ ++ PI+ VK +Q ++A + YK I GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260
Query: 457 RG 462
G
Sbjct: 261 SG 262
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.7 bits (66), Expect = 0.17
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 12/111 (10%)
Frame = +1
Query: 214 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS----KQIA 381
V +T +N SN P + F+AGG++ + A AP++ VK LQ KQ A
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTA 90
Query: 382 ADQ-----RYKGIXDA---FXXIPXXQGLLSFWRGNFXNVXXYFPXXALNF 510
+ Y+ D + +G + +RG N+ P ++NF
Sbjct: 91 KSKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINF 141
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.5 bits (63), Expect = 0.39
Identities = 23/92 (25%), Positives = 35/92 (38%)
Frame = +1
Query: 253 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIXDAFXXIPX 432
D + F F AG ++ + P++ VK +Q+ V K Y G D I
Sbjct: 4 DNIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVK 57
Query: 433 XQGLLSFWRGNFXNVXXYFPXXALNFXFKDKF 528
+G +RG + P AL F D +
Sbjct: 58 NEGPHRLYRGILPPILMEAPKRALKFASNDTY 89
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 0.39
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 359 STSASRSPPTSVTRVSXMPSXXSPXXRVSFHSGXXTSXTXXCTSXXXRSTSXSRTS 526
+TSAS +P TSV + + +P V+ S S T ++ STS S T+
Sbjct: 351 ATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTA 406
Score = 29.5 bits (63), Expect = 0.39
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 359 STSASRSPPTSVTRVSXMPSXXSPXXRVSFHSGXXTSXTXXCTSXXXRSTSXSRTS 526
+TSAS +P TSV + + +P V+ S S T ++ STS S T+
Sbjct: 465 ATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTA 520
Score = 26.6 bits (56), Expect = 2.8
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +2
Query: 359 STSASRSPPTSVTRVSXMPSXXSPXXRVSFHSGXXTSXTXXCTSXXXRSTSXSRTSSXXX 538
+TSAS +P TSV + + +P VS S T+ T ++ S + TS+
Sbjct: 300 ATSASSTPLTSVNSTTTTSASSTPLSSVS--SANSTTATSTSSTPLSSVNSTTATSASST 357
Query: 539 XLGGVDKXT 565
L V+ T
Sbjct: 358 PLTSVNSTT 366
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 114 YEITPNLLFKNQELVFRDPPSACAATPTSTY 206
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,865,769
Number of Sequences: 5004
Number of extensions: 32367
Number of successful extensions: 112
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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