Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2255
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.9  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    24   4.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   10.0 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   10.0 

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = -1

Query: 177  GKLSGTLRLASSAFNLLRWLGFLMPTAVRSSGVILVMVGRSYP-ASMKSRAYSSIWRSAK 1
            G L+G +  AS  FN+   + F +   +  S  I +MVG     A     A S  W   K
Sbjct: 2776 GLLTGAVTGASIPFNMASSVAFFVGMGLSLSTSIAIMVGTGITFAYFMMAASSGTWDPTK 2835


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 10  PPNGGVRAALHRGWVRSADHNKDDSRG 90
           PPN  +R   +  W+ +A H   + RG
Sbjct: 137 PPNNAIRRDPNVNWICNAVHKHRELRG 163


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 91  PHGCRHQETQPPQEV 135
           PHGC      PP EV
Sbjct: 683 PHGCNDANRGPPAEV 697


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 223 SGRVRASPSGAGLSXRARRHSTRLGGS*GHGNSAAWS 333
           SG + ASP+    S   R  S   GG  G G + +++
Sbjct: 147 SGAIHASPNAQNPSSGGRSSSGGGGGGGGGGGAGSFA 183


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 512 RQSLDQEVYDNSSPTGNAPSDINPGPAVS 426
           +Q   Q+ Y    P G  P+  NP  AV+
Sbjct: 483 QQQQQQQQYKLQPPPGGRPNAPNPSSAVT 511


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,418
Number of Sequences: 2352
Number of extensions: 11269
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)