Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2255
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical pr... 106 1e-23
U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical pr... 106 1e-23
AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical... 34 0.067
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 31 0.48
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 31 0.48
U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 31 0.63
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 31 0.63
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 28 4.4
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 28 4.4
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 28 4.4
>U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical
protein C46H3.2b protein.
Length = 577
Score = 106 bits (254), Expect = 1e-23
Identities = 51/125 (40%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +2
Query: 2 LADLQMEEYARLFIEAGYDLPTITRMTPEDLTAVGIKKPNHRKRLKAELANLNVPDNLPD 181
L + M Y +F++ GYDL TI R TP DL ++GIK P+HRK+L +++ + + D P
Sbjct: 206 LDSINMSNYLAVFLKQGYDLQTIARCTPADLLSLGIKNPDHRKKLMSDIHSWKIIDQWPS 265
Query: 182 YIP-GSXXXXXXXXXXXXYGPALVAQGYRTVHDVTQLAWEDLEDMGIVRLGHQKKILLAI 358
+P S Y P +Q Y +V DV L WED ED+G+ RLGH K+ L I
Sbjct: 266 VVPNNSLREWLHAIALAEYIPMFESQRYTSVSDVLDLQWEDFEDIGVKRLGHLKRFGLTI 325
Query: 359 KRVKD 373
K++KD
Sbjct: 326 KKLKD 330
>U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical
protein C46H3.2a protein.
Length = 713
Score = 106 bits (254), Expect = 1e-23
Identities = 51/125 (40%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +2
Query: 2 LADLQMEEYARLFIEAGYDLPTITRMTPEDLTAVGIKKPNHRKRLKAELANLNVPDNLPD 181
L + M Y +F++ GYDL TI R TP DL ++GIK P+HRK+L +++ + + D P
Sbjct: 342 LDSINMSNYLAVFLKQGYDLQTIARCTPADLLSLGIKNPDHRKKLMSDIHSWKIIDQWPS 401
Query: 182 YIP-GSXXXXXXXXXXXXYGPALVAQGYRTVHDVTQLAWEDLEDMGIVRLGHQKKILLAI 358
+P S Y P +Q Y +V DV L WED ED+G+ RLGH K+ L I
Sbjct: 402 VVPNNSLREWLHAIALAEYIPMFESQRYTSVSDVLDLQWEDFEDIGVKRLGHLKRFGLTI 461
Query: 359 KRVKD 373
K++KD
Sbjct: 462 KKLKD 466
>AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical
protein Y60A3A.27 protein.
Length = 505
Score = 34.3 bits (75), Expect = 0.067
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 244 PSGAGLSXRARRHSTRLGGS*GHGNSAAWSPEEN 345
PS G + R R R GG H N+A W+P+ N
Sbjct: 224 PSRGGYNQRGNRGGQRFGGFGNHENNARWNPQRN 257
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 31.5 bits (68), Expect = 0.48
Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 3/140 (2%)
Frame = +2
Query: 5 ADLQ--MEEYARLFIEAGYDLPTITRMTPEDLTAVGIKKPNHRKRLKAELANLNVPDNLP 178
ADLQ + E A++ I+ +D + ++LT IK+ R+ A L + P L
Sbjct: 438 ADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKE--ELDRVLAWLQGDDDPSALS 495
Query: 179 DYIPG-SXXXXXXXXXXXXYGPALVAQGYRTVHDVTQLAWEDLEDMGIVRLGHQKKILLA 355
+ G PA +G+ TV DV+ W+D+ + VR + IL
Sbjct: 496 ELNGGLQISFEDFERALSTIQPAAKREGFATVPDVS---WDDIGALVEVRKQLEWSILYP 552
Query: 356 IKRVKDIXAGKRSISXQGSL 415
IKR D A QG L
Sbjct: 553 IKRADDFAALGIDCRPQGIL 572
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 31.5 bits (68), Expect = 0.48
Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 3/140 (2%)
Frame = +2
Query: 5 ADLQ--MEEYARLFIEAGYDLPTITRMTPEDLTAVGIKKPNHRKRLKAELANLNVPDNLP 178
ADLQ + E A++ I+ +D + ++LT IK+ R+ A L + P L
Sbjct: 438 ADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKE--ELDRVLAWLQGDDDPSALS 495
Query: 179 DYIPG-SXXXXXXXXXXXXYGPALVAQGYRTVHDVTQLAWEDLEDMGIVRLGHQKKILLA 355
+ G PA +G+ TV DV+ W+D+ + VR + IL
Sbjct: 496 ELNGGLQISFEDFERALSTIQPAAKREGFATVPDVS---WDDIGALVEVRKQLEWSILYP 552
Query: 356 IKRVKDIXAGKRSISXQGSL 415
IKR D A QG L
Sbjct: 553 IKRADDFAALGIDCRPQGIL 572
>U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical
protein C05D10.4c protein.
Length = 418
Score = 31.1 bits (67), Expect = 0.63
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +2
Query: 2 LADLQMEEYARLFIEAGYDL--PTITRMTPEDLTAVGIKKPNHRKRLKAELANL--NVPD 169
L QM++ A L I GYDL + + + L +G+ P RK+L +L+ + N P+
Sbjct: 232 LQSAQMDDVAGLLI--GYDLRGEDLLQWNDQTLAQLGVSNPEIRKKLLDDLSKIIENGPE 289
Query: 170 NLPDYIPGSXXXXXXXXXXXXYGPALVAQGYRTVHDVT 283
+ I + Y L + T D+T
Sbjct: 290 PAQEDIRNNHRTLFDIVKQTSYDQVLAVETPLTTRDIT 327
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 31.1 bits (67), Expect = 0.63
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +2
Query: 2 LADLQMEEYARLFIEAGYDL--PTITRMTPEDLTAVGIKKPNHRKRLKAELANL--NVPD 169
L QM++ A L I GYDL + + + L +G+ P RK+L +L+ + N P+
Sbjct: 411 LQSAQMDDVAGLLI--GYDLRGEDLLQWNDQTLAQLGVSNPEIRKKLLDDLSKIIENGPE 468
Query: 170 NLPDYIPGSXXXXXXXXXXXXYGPALVAQGYRTVHDVT 283
+ I + Y L + T D+T
Sbjct: 469 PAQEDIRNNHRTLFDIVKQTSYDQVLAVETPLTTRDIT 506
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.63
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +2
Query: 2 LADLQMEEYARLFIEAGYDL--PTITRMTPEDLTAVGIKKPNHRKRLKAELANL--NVPD 169
L QM++ A L I GYDL + + + L +G+ P RK+L +L+ + N P+
Sbjct: 379 LQSAQMDDVAGLLI--GYDLRGEDLLQWNDQTLAQLGVSNPEIRKKLLDDLSKIIENGPE 436
Query: 170 NLPDYIPGSXXXXXXXXXXXXYGPALVAQGYRTVHDVT 283
+ I + Y L + T D+T
Sbjct: 437 PAQEDIRNNHRTLFDIVKQTSYDQVLAVETPLTTRDIT 474
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 99 LSASRNPTTARG*RQSSPISTYRIICQTTYRVP*-KNGCVFYVWKST 236
L R T R +PI IIC+ + P KN FY WKS+
Sbjct: 209 LEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFYTWKSS 255
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 99 LSASRNPTTARG*RQSSPISTYRIICQTTYRVP*-KNGCVFYVWKST 236
L R T R +PI IIC+ + P KN FY WKS+
Sbjct: 206 LEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFYTWKSS 252
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 99 LSASRNPTTARG*RQSSPISTYRIICQTTYRVP*-KNGCVFYVWKST 236
L R T R +PI IIC+ + P KN FY WKS+
Sbjct: 209 LEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFYTWKSS 255
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 99 LSASRNPTTARG*RQSSPISTYRIICQTTYRVP*-KNGCVFYVWKST 236
L R T R +PI IIC+ + P KN FY WKS+
Sbjct: 206 LEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFYTWKSS 252
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 99 LSASRNPTTARG*RQSSPISTYRIICQTTYRVP*-KNGCVFYVWKST 236
L R T R +PI IIC+ + P KN FY WKS+
Sbjct: 208 LEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFYTWKSS 254
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 99 LSASRNPTTARG*RQSSPISTYRIICQTTYRVP*-KNGCVFYVWKST 236
L R T R +PI IIC+ + P KN FY WKS+
Sbjct: 211 LEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFYTWKSS 257
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 99 LSASRNPTTARG*RQSSPISTYRIICQTTYRVP*-KNGCVFYVWKST 236
L R T R +PI IIC+ + P KN FY WKS+
Sbjct: 208 LEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFYTWKSS 254
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 99 LSASRNPTTARG*RQSSPISTYRIICQTTYRVP*-KNGCVFYVWKST 236
L R T R +PI IIC+ + P KN FY WKS+
Sbjct: 211 LEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFYTWKSS 257
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily assigned
gene nameprotein 137, isoform b protein.
Length = 1321
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 2 LADLQMEEYARLFIEAGYDLPTITRMTPEDLTAVGIKKPNHRKRLKAELANL 157
L+ + M EY F + + + D+ +GI K H KRL++ + +L
Sbjct: 1181 LSSIGMSEYGSTFRKNDIQGSELMHLERSDIMDIGITKIGHVKRLQSAIVDL 1232
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily assigned
gene nameprotein 137, isoform a protein.
Length = 1372
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 2 LADLQMEEYARLFIEAGYDLPTITRMTPEDLTAVGIKKPNHRKRLKAELANL 157
L+ + M EY F + + + D+ +GI K H KRL++ + +L
Sbjct: 1232 LSSIGMSEYGSTFRKNDIQGSELMHLERSDIMDIGITKIGHVKRLQSAIVDL 1283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,552,120
Number of Sequences: 27780
Number of extensions: 251202
Number of successful extensions: 600
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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