Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2248
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   3.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.8  

>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 375 RKVCLNHTLNESESNIRDLIQQKRMK 452
           R++ + HTL  SE  I+   Q +RMK
Sbjct: 262 RRIEIAHTLVLSERQIKIWFQNRRMK 287


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 375 RKVCLNHTLNESESNIRDLIQQKRMK 452
           R++ + HTL  SE  I+   Q +RMK
Sbjct: 262 RRIEIAHTLVLSERQIKIWFQNRRMK 287


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 228 QREIDVLPPGTKTYESMARMFVQSDLE 308
           + E  V+P G++T   + R +  SDLE
Sbjct: 163 REEATVVPEGSRTPIEIPRDYTASDLE 189


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 452 FHPFLLNQISDVGLTFI 402
           F PFL++ IS V L F+
Sbjct: 232 FEPFLISNISLVSLIFL 248


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 387 LNHTLNESESNIRDLIQQKRMKNE 458
           L   LN +E  ++   Q +RMKN+
Sbjct: 276 LARNLNLTERQVKIWFQNRRMKNK 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,987
Number of Sequences: 336
Number of extensions: 2628
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)