Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2247
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.1  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 360 KNCIKIRCVVLKILAYI 410
           + C++I   +LKI+AY+
Sbjct: 60  QKCLEITVKILKIVAYL 76


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 360 KNCIKIRCVVLKILAYI 410
           + C++I   +LKI+AY+
Sbjct: 60  QKCLEITVKILKIVAYL 76


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 360 KNCIKIRCVVLKILAYI 410
           + C++I   +LKI+AY+
Sbjct: 60  QKCLEITVKILKIVAYL 76


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 360 KNCIKIRCVVLKILAYI 410
           + C++I   +LKI+AY+
Sbjct: 60  QKCLEITVKILKIVAYL 76


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 330 VYMCNNIH*IVE 295
           V+MCNN+H  +E
Sbjct: 237 VWMCNNLHKALE 248


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 330 VYMCNNIH*IVE 295
           V+MCNN+H  +E
Sbjct: 237 VWMCNNLHKALE 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,531
Number of Sequences: 336
Number of extensions: 2607
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)