Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2246
(500 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 209 1e-54
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 209 1e-54
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 209 1e-54
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 209 1e-54
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 209 1e-54
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 209 1e-54
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 209 1e-54
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 207 3e-54
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 202 9e-53
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 176 9e-45
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 175 1e-44
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 175 1e-44
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 175 1e-44
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 170 6e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 122 2e-28
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 105 1e-23
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 85 2e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 67 8e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 46 1e-05
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 32 0.27
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 31 0.47
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 31 0.47
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 31 0.62
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 29 2.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.4
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 5.8
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 5.8
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 5.8
U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 209 bits (510), Expect = 1e-54
Identities = 95/103 (92%), Positives = 96/103 (93%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQI 123
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 209 bits (510), Expect = 1e-54
Identities = 95/103 (92%), Positives = 96/103 (93%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQI 123
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 209 bits (510), Expect = 1e-54
Identities = 95/103 (92%), Positives = 96/103 (93%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQI 123
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 209 bits (510), Expect = 1e-54
Identities = 95/103 (92%), Positives = 96/103 (93%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQI 123
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 209 bits (510), Expect = 1e-54
Identities = 95/103 (92%), Positives = 96/103 (93%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQI 123
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 209 bits (510), Expect = 1e-54
Identities = 95/103 (92%), Positives = 96/103 (93%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQI 123
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 209 bits (510), Expect = 1e-54
Identities = 95/103 (92%), Positives = 96/103 (93%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQI 123
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 207 bits (506), Expect = 3e-54
Identities = 93/103 (90%), Positives = 96/103 (93%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQI 123
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 202 bits (494), Expect = 9e-53
Identities = 92/101 (91%), Positives = 94/101 (93%)
Frame = +3
Query: 135 DE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAXSK 314
+E AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA SK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 315 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+AP P
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP +N EKMTQI
Sbjct: 98 PEEHPVLLTEAPLNPKSNREKMTQI 122
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 176 bits (428), Expect = 9e-45
Identities = 79/85 (92%), Positives = 80/85 (94%)
Frame = +3
Query: 183 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAXSKRGILTLKYPIEHGIVT 362
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA SKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 363 NWDDMEKIWHHTFYNELRVAPRGTP 437
NWDDMEKIWHHTFYNELRVAP P
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHP 89
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 85 PEEHPVLLTEAPLNPKANREKMTQI 109
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 175 bits (427), Expect = 1e-44
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKI 386
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 175 bits (427), Expect = 1e-44
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKI 386
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 175 bits (427), Expect = 1e-44
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDMEKI 386
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 170 bits (413), Expect = 6e-43
Identities = 78/83 (93%), Positives = 79/83 (95%)
Frame = +3
Query: 129 MCDE*XAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAX 308
MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV DEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 309 SKRGILTLKYPIEHGIVTNWDDM 377
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 122 bits (293), Expect = 2e-28
Identities = 54/59 (91%), Positives = 54/59 (91%)
Frame = +3
Query: 261 MVGMGQKDSYVXDEAXSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRGTP 437
MVGMGQKDSYV DEA SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 59
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLTEAPLNP AN EKMTQI
Sbjct: 55 PEEHPVLLTEAPLNPKANREKMTQI 79
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 105 bits (253), Expect = 1e-23
Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAXSKRGILTL 332
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++ +A S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 333 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPRGTP 437
+YP+EHGIV NW DMEKIW + F ++L++ P P
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHP 106
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PEEHPVLLT+APLNP N E+ +I
Sbjct: 102 PEEHPVLLTDAPLNPLKNRERSAEI 126
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 85.4 bits (202), Expect = 2e-17
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVXDEAXSKRGIL 326
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD V +E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 327 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPR 428
+ YP+++GIV NWDDM +W HTF E L + P+
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPK 103
Score = 35.1 bits (77), Expect = 0.029
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
P+E +LLTE PLNP +N EKM Q+
Sbjct: 102 PKECKLLLTEPPLNPNSNREKMFQV 126
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 66.9 bits (156), Expect = 8e-12
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Frame = +3
Query: 150 ALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGMGQKDSYV 293
A V+DNG+G K G+AG+ P+ + PS V Q V G+ D ++
Sbjct: 8 ACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFI 67
Query: 294 XDEAXSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 425
DEA S T+KYPI HGIV +WD ME+ W + LR P
Sbjct: 68 GDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEP 112
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
PE+H LLTE PLN N E +I
Sbjct: 112 PEDHFFLLTEPPLNTPENREYTAEI 136
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAXSKRGILTL 332
++ DNG K G ++PR V SIV + +H+ V + + +E K + +
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYV 60
Query: 333 KYPIEHGIVTNWDDMEKIWHHTF 401
+ PIE G V NWD ++IW TF
Sbjct: 61 R-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVXDEAXSKRGILTL 332
++ DNG K G ++PR V SIV + +H+ V + + +E K + +
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYV 60
Query: 333 KYPIEHGIVTNWDDMEKIWHHTF 401
+ PIE G V NWD ++IW TF
Sbjct: 61 R-PIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 424 PEEHPVLLTEAPLNPXANXEKMTQI 498
P EHPVL +E+ N A EK+T+I
Sbjct: 121 PSEHPVLFSESSWNDRARREKLTEI 145
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 147 AALVVDNGSGMCKAGFAGDDAPRAVFPSIV 236
+ LV D GS + GFAG++ P+ PS +
Sbjct: 12 SGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 315 FCXVPHLXHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 160
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 315 FCXVPHLXHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 160
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 30.7 bits (66), Expect = 0.62
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 358 TIPCSMGYLRVRIPLLLCASSXT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPAL 182
T+ S PL++ +SS S TITP +G+PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 181 HIPEPLSTTNAAXYSS 134
+ STT A +S
Sbjct: 511 TVTASPSTTGATSTAS 526
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 354 IVTNWDDMEKIWHHTFYNELRVAPRGTPSPAH 449
++ NWD EK W TF+ L+ R P P H
Sbjct: 382 VLQNWDQTEKDWSPTFWFLLKCI-REMPIPLH 412
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 183 KAGFAGDDAPRAVFPSIVGRPRHQG 257
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 237 GRPRHQGVMVGMGQKDSYVXD----EAXSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 401
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 237 GRPRHQGVMVGMGQKDSYVXD----EAXSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 401
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 233 RGKAPPSGRDGRYGTEG 283
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 368 PVSDDSVFDGVFEGQDTSFAXCLISYIRVLLSHTDHH 258
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical
protein T05A7.3 protein.
Length = 155
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 397 PSTMSCVXPPEEHPVLLTEAPLNP 468
P+ ++C P PV++T AP NP
Sbjct: 25 PTGITCGPPTPAPPVIITPAPTNP 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,401,916
Number of Sequences: 27780
Number of extensions: 239407
Number of successful extensions: 824
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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