Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2242
(550 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 173 1e-43
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 173 1e-43
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 173 1e-43
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 173 1e-43
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 173 1e-43
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 30 2.4
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 30 2.4
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 30 2.4
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 29 3.1
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 29 3.1
AY118473-1|AAM49842.1| 1162|Drosophila melanogaster GM14375p pro... 29 5.5
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 173 bits (421), Expect = 1e-43
Identities = 85/146 (58%), Positives = 99/146 (67%)
Frame = +2
Query: 2 APLVVKRLSPXKIVNPLFEKRPKNFAIGXGIQPTRDLXRFXRWPKYIRIQRXKAVLQRRL 181
APL VK+ K+VN LFEKRPKNF IG +QP RDL RF RWPKYIR+QR KAVLQ+RL
Sbjct: 20 APLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRL 79
Query: 182 KVPPPINQFTXTLDKTTAKGLFKILXKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPN 361
KVPPPI+QF+ TLDKTTA LFK+L KYRP +P+
Sbjct: 80 KVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPS 139
Query: 362 TIRSGTNTVTKLVEKNKAQLVVIAHD 439
+ +GTNTVTKL+E+ KAQLVVIAHD
Sbjct: 140 YVSAGTNTVTKLIEQKKAQLVVIAHD 165
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +3
Query: 441 VDPIELVLFLPAXCRKMGXPYCIVKGXFRLGALVHR 548
VDP+ELVLFLPA CRKMG PYCIVKG RLG LV R
Sbjct: 166 VDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRR 201
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 173 bits (421), Expect = 1e-43
Identities = 85/146 (58%), Positives = 99/146 (67%)
Frame = +2
Query: 2 APLVVKRLSPXKIVNPLFEKRPKNFAIGXGIQPTRDLXRFXRWPKYIRIQRXKAVLQRRL 181
APL VK+ K+VN LFEKRPKNF IG +QP RDL RF RWPKYIR+QR KAVLQ+RL
Sbjct: 20 APLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRL 79
Query: 182 KVPPPINQFTXTLDKTTAKGLFKILXKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPN 361
KVPPPI+QF+ TLDKTTA LFK+L KYRP +P+
Sbjct: 80 KVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139
Query: 362 TIRSGTNTVTKLVEKNKAQLVVIAHD 439
+ +GTNTVTKL+E+ KAQLVVIAHD
Sbjct: 140 YVSAGTNTVTKLIEQKKAQLVVIAHD 165
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +3
Query: 441 VDPIELVLFLPAXCRKMGXPYCIVKGXFRLGALVHR 548
VDP+ELVLFLPA CRKMG PYCIVKG RLG LV R
Sbjct: 166 VDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRR 201
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 173 bits (421), Expect = 1e-43
Identities = 85/146 (58%), Positives = 99/146 (67%)
Frame = +2
Query: 2 APLVVKRLSPXKIVNPLFEKRPKNFAIGXGIQPTRDLXRFXRWPKYIRIQRXKAVLQRRL 181
APL VK+ K+VN LFEKRPKNF IG +QP RDL RF RWPKYIR+QR KAVLQ+RL
Sbjct: 20 APLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRL 79
Query: 182 KVPPPINQFTXTLDKTTAKGLFKILXKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPN 361
KVPPPI+QF+ TLDKTTA LFK+L KYRP +P+
Sbjct: 80 KVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139
Query: 362 TIRSGTNTVTKLVEKNKAQLVVIAHD 439
+ +GTNTVTKL+E+ KAQLVVIAHD
Sbjct: 140 YVSAGTNTVTKLIEQKKAQLVVIAHD 165
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +3
Query: 441 VDPIELVLFLPAXCRKMGXPYCIVKGXFRLGALVHR 548
VDP+ELVLFLPA CRKMG PYCIVKG RLG LV R
Sbjct: 166 VDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRR 201
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 173 bits (421), Expect = 1e-43
Identities = 85/146 (58%), Positives = 99/146 (67%)
Frame = +2
Query: 2 APLVVKRLSPXKIVNPLFEKRPKNFAIGXGIQPTRDLXRFXRWPKYIRIQRXKAVLQRRL 181
APL VK+ K+VN LFEKRPKNF IG +QP RDL RF RWPKYIR+QR KAVLQ+RL
Sbjct: 20 APLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRL 79
Query: 182 KVPPPINQFTXTLDKTTAKGLFKILXKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPN 361
KVPPPI+QF+ TLDKTTA LFK+L KYRP +P+
Sbjct: 80 KVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139
Query: 362 TIRSGTNTVTKLVEKNKAQLVVIAHD 439
+ +GTNTVTKL+E+ KAQLVVIAHD
Sbjct: 140 YVSAGTNTVTKLIEQKKAQLVVIAHD 165
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +3
Query: 441 VDPIELVLFLPAXCRKMGXPYCIVKGXFRLGALVHR 548
VDP+ELVLFLPA CRKMG PYCIVKG RLG LV R
Sbjct: 166 VDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRR 201
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 173 bits (421), Expect = 1e-43
Identities = 85/146 (58%), Positives = 99/146 (67%)
Frame = +2
Query: 2 APLVVKRLSPXKIVNPLFEKRPKNFAIGXGIQPTRDLXRFXRWPKYIRIQRXKAVLQRRL 181
APL VK+ K+VN LFEKRPKNF IG +QP RDL RF RWPKYIR+QR KAVLQ+RL
Sbjct: 20 APLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRL 79
Query: 182 KVPPPINQFTXTLDKTTAKGLFKILXKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPN 361
KVPPPI+QF+ TLDKTTA LFK+L KYRP +P+
Sbjct: 80 KVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139
Query: 362 TIRSGTNTVTKLVEKNKAQLVVIAHD 439
+ +GTNTVTKL+E+ KAQLVVIAHD
Sbjct: 140 YVSAGTNTVTKLIEQKKAQLVVIAHD 165
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +3
Query: 441 VDPIELVLFLPAXCRKMGXPYCIVKGXFRLGALVHR 548
VDP+ELVLFLPA CRKMG PYCIVKG RLG LV R
Sbjct: 166 VDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRR 201
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 441 VDPIELVLFLPAXCRKMGXPYCIVKGXFRLGA 536
V P++++ LPA C + G PY LGA
Sbjct: 92 VTPVDIMCHLPAVCEEKGIPYTYTPSRADLGA 123
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 441 VDPIELVLFLPAXCRKMGXPYCIVKGXFRLGA 536
V P++++ LPA C + G PY LGA
Sbjct: 92 VTPVDIMCHLPAVCEEKGIPYTYTPSRADLGA 123
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 441 VDPIELVLFLPAXCRKMGXPYCIVKGXFRLGA 536
V P++++ LPA C + G PY LGA
Sbjct: 92 VTPVDIMCHLPAVCEEKGIPYTYTPSRADLGA 123
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 444 DPIELVLFLPAXCRKMGXPYCIVKGXFRLG 533
+PIE++L LP C PY V+ LG
Sbjct: 60 EPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 444 DPIELVLFLPAXCRKMGXPYCIVKGXFRLG 533
+PIE++L LP C PY V+ LG
Sbjct: 60 EPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>AY118473-1|AAM49842.1| 1162|Drosophila melanogaster GM14375p
protein.
Length = 1162
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 133 QVYPHPAPXGCTSASSESAPSDQPIYPXTGQDYS 234
+V+P A GC S S+S P D P ++YS
Sbjct: 478 EVFPRLAHIGCESFGSKSGPLDIPFALRAEEEYS 511
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,071,575
Number of Sequences: 53049
Number of extensions: 339890
Number of successful extensions: 818
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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