Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2237
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 148 2e-37
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 148 2e-37
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 148 2e-37
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 139 9e-35
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 26 0.99
AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 25 1.7
AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 24 5.3
EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calc... 23 9.2
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 23 9.2
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 148 bits (358), Expect = 2e-37
Identities = 70/86 (81%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTGI L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDS 156
Score = 94.7 bits (225), Expect = 3e-21
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 83.8 bits (198), Expect = 5e-18
Identities = 39/46 (84%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGVSHTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 52.4 bits (120), Expect = 1e-08
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCDEEVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAG 24
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 148 bits (358), Expect = 2e-37
Identities = 70/86 (81%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTGI L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDS 156
Score = 94.7 bits (225), Expect = 3e-21
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 83.8 bits (198), Expect = 5e-18
Identities = 39/46 (84%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGVSHTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 52.4 bits (120), Expect = 1e-08
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCDEEVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAG 24
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 148 bits (358), Expect = 2e-37
Identities = 70/86 (81%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTGI L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDS 156
Score = 94.7 bits (225), Expect = 3e-21
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 83.8 bits (198), Expect = 5e-18
Identities = 39/46 (84%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGVSHTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 52.4 bits (120), Expect = 1e-08
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCDEEVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAG 24
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 139 bits (336), Expect = 9e-35
Identities = 64/86 (74%), Positives = 68/86 (79%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P I+TNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP + R KMTQIMFET
Sbjct: 71 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFAA 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P +YV IQAVLSLYASGRTTG+ L S
Sbjct: 131 PAVYVAIQAVLSLYASGRTTGVVLDS 156
Score = 91.5 bits (217), Expect = 2e-20
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG G KD+YV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQSKRGILTLKYPIEHG 75
Score = 83.0 bits (196), Expect = 8e-18
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGVSHTVPIYEGYALPHA LR+ G DLTDYLMKILTER YS TT
Sbjct: 158 DGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMKILTERGYSFTT 203
Score = 46.8 bits (106), Expect = 7e-07
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD++ ALVV NGSGMCKAGFAG
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAG 24
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 26.2 bits (55), Expect = 0.99
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 58 IELFN*KLIQDVRRRSCRVGSXQWLRYVQGRFRRSMMLLAPCSPRSW 198
+ F K + +VRR C + LRYV+G ++ + + CS W
Sbjct: 44 VNAFQRKFVSEVRR--CDEMERK-LRYVEGEVKKDSVQIPECSVDDW 87
>AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein.
Length = 165
Score = 25.4 bits (53), Expect = 1.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 198 PRSRGTRREEHHAPAKPALHIPEPLXTTNAATSSSH 91
PR T +HAP PA EP+ +A SSS+
Sbjct: 63 PREHATS-SPYHAPPSPANSHYEPMECHSAVNSSSN 97
>AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein.
Length = 356
Score = 23.8 bits (49), Expect = 5.3
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -1
Query: 193 IEGNTARGASCSCETGLAHTGAIVYYQRGNFFVAHLELVFN*IVLL*INKLTCYCTASL 17
++ +T + S TGLAH + RG +AH +L I++ + LTC C L
Sbjct: 151 VDPDTMLEMAFSIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVK--SNLTC-CIGDL 206
>EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calcium
channel beta subunitprotein.
Length = 466
Score = 23.0 bits (47), Expect = 9.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2
Query: 165 HAPAKPALHIPEPLXTTNAATS 100
H P +P +P PL + A+ S
Sbjct: 425 HPPVRPTPSVPRPLPSQEASPS 446
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 23.0 bits (47), Expect = 9.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -2
Query: 207 GAFPRSRGTRREEHHAPAKPALHIPE 130
G + TR EH+ P KP P+
Sbjct: 243 GTMAEGKQTRAGEHNGPVKPVPRRPK 268
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,522
Number of Sequences: 2352
Number of extensions: 11466
Number of successful extensions: 56
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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