Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2237
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 148 4e-36
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 148 4e-36
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 147 6e-36
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 147 6e-36
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 147 6e-36
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 147 6e-36
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 147 6e-36
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 147 6e-36
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 147 6e-36
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 147 6e-36
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 145 3e-35
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 102 3e-22
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 95 6e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 95 6e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 95 6e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 95 6e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 86 2e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 70 1e-12
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 66 3e-11
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 31 0.60
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL034391-1|CAA22302.2| 333|Caenorhabditis elegans Hypothetical ... 29 4.2
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 28 5.6
AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 148 bits (358), Expect = 4e-36
Identities = 70/86 (81%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTGI L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDS 156
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD++VAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAG 24
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (358), Expect = 4e-36
Identities = 70/86 (81%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTGI L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDS 156
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD++VAAL++ NGSGMCKAGFAG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAG 24
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 147 bits (357), Expect = 6e-36
Identities = 69/86 (80%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTG+ L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD+EVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAG 24
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 147 bits (357), Expect = 6e-36
Identities = 69/86 (80%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTG+ L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD+EVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAG 24
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 147 bits (357), Expect = 6e-36
Identities = 69/86 (80%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTG+ L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD+EVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAG 24
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 147 bits (357), Expect = 6e-36
Identities = 69/86 (80%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTG+ L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD+EVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAG 24
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 147 bits (357), Expect = 6e-36
Identities = 69/86 (80%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTG+ L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD+EVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAG 24
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 147 bits (357), Expect = 6e-36
Identities = 69/86 (80%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 27 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 86
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTG+ L S
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVLDS 112
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 114 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 159
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +3
Query: 222 MVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
MVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 31
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 147 bits (357), Expect = 6e-36
Identities = 69/86 (80%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 57 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTG+ L S
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDS 142
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 12 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 61
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 144 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 189
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 147 bits (357), Expect = 6e-36
Identities = 69/86 (80%), Positives = 70/86 (81%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELRVAP EHP LLTEAPLNP A R KMTQIMFET NT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 481 PXMYVXIQAVLSLYASGRTTGIXLXS 558
P MYV IQAVLSLYASGRTTG+ L S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA LRL G DLTDYLMKILTER YS TT
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD+EVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAG 24
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 145 bits (351), Expect = 3e-35
Identities = 67/84 (79%), Positives = 69/84 (82%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IVTNWDDM K WHHTFYNELR+AP EHP LLTEAPLNP + R KMTQIMFET NT
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNT 129
Query: 481 PXMYVXIQAVLSLYASGRTTGIXL 552
P MYV IQAVLSLYASGRTTGI L
Sbjct: 130 PAMYVNIQAVLSLYASGRTTGIVL 153
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 25 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYSXTT 700
DGV+HTVPIYEGYALPHA RL G DLTDY+MKILTER Y+ TT
Sbjct: 157 DGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTT 202
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 95 DEEVAALVVXNGSGMCKAGFAG 160
+EE+AALVV NGSGMCKAGFAG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAG 23
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 102 bits (244), Expect = 3e-22
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTF-YNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXN 477
P IV NW DM K W + F ++L++ P EHP LLT+APLNP R + +I FET N
Sbjct: 73 PMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFN 132
Query: 478 TPXMYVXIQAVLSLYASGRTTGIXLXS 558
P +Y+ +QAVLSLYA+GRTTG+ L S
Sbjct: 133 VPALYIQMQAVLSLYATGRTTGVVLDS 159
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXY 688
DGV+H VPI +G+A+ HA R+ G D+T+YL +L Y
Sbjct: 161 DGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGY 202
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 171 PRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
P+ F + VGRP++ VM G D ++ +A+S RG ++ YP HG
Sbjct: 30 PKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHG 77
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 113 LVVXNGSGMCKAGFAG 160
+V+ NGSG+ KAGFAG
Sbjct: 11 VVIDNGSGVIKAGFAG 26
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD++VAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAG 24
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD+EVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAG 24
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD++VAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAG 24
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 94.7 bits (225), Expect = 6e-20
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3
Query: 165 DAPRAVFPSIVGRPRHQGVMVGXGQKDSYV*DEAQSKRGXLTLXYPXXHG 314
DAPRAVFPSIVGRPRHQGVMVG GQKDSYV DEAQSKRG LTL YP HG
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 89 MCDEEVAALVVXNGSGMCKAGFAG 160
MCD+EVAALVV NGSGMCKAGFAG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAG 24
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNE-LRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXN 477
P IV NWDDM W HTF E L + P E LLTE PLNP + R KM Q+MFE
Sbjct: 73 PMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYG 132
Query: 478 TPXMYVXIQAVLSLYASGRTTGIXLXS 558
+YV +QAVL+LYA G TG+ + S
Sbjct: 133 FNSIYVAVQAVLTLYAQGLLTGVVVDS 159
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYS 691
DGV+H P+YEG+AL H RL G D+T YL+K+L +R Y+
Sbjct: 161 DGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYN 203
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 171 PRAVFPSIVGRPRHQGVM-VGXGQ-KDSYV*DEAQSKRGXLTLXYPXXHG 314
P +FPS+VGRP + VG + KD V +E R L + YP +G
Sbjct: 28 PAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNG 77
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/76 (43%), Positives = 43/76 (56%)
Frame = +1
Query: 301 PXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNT 480
P IV +WD M + W + LR P +H LLTE PLN R +IMFE+ N
Sbjct: 84 PIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNV 143
Query: 481 PXMYVXIQAVLSLYAS 528
P +Y+ +QAVL+L AS
Sbjct: 144 PGLYIAVQAVLALTAS 159
Score = 35.9 bits (79), Expect = 0.028
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 563 DGVSHTVPIYEGYALPHAXLRLXXGGPDLTDYLMKILTERXYS 691
DGV+H +P+ +GY + + G D+T ++ +L +R ++
Sbjct: 179 DGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHT 221
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +1
Query: 316 IVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXAXRXKMTQIMFETXNTPXMYV 495
++ +W+ K H++ N L P EHP L +E+ N A R K+T+IMFE P Y+
Sbjct: 98 LIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYL 157
Query: 496 XIQAVLSLYASGRTTGIXLXS 558
VLS +A GRT G+ + S
Sbjct: 158 SKNVVLSCFAQGRTHGLMVDS 178
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 581 VPIYEGYALPHAXLRLXXGGPDLTDYLMKILTER 682
VP+++GYA+ HA ++ GG +T+ L ++L ++
Sbjct: 186 VPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +3
Query: 501 PSRALAVRVRSYHRXRAXLXRTVSPTPCPSTKDTHSPTPXCVXTXAGPTSQTTX*RSXPS 680
PS RV+S + + T +P PCP+T T + V T + T+ TT P
Sbjct: 419 PSYWTKHRVKSTKEPKTTIF-TTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPV 477
Query: 681 AGT 689
T
Sbjct: 478 TST 480
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/97 (27%), Positives = 38/97 (39%)
Frame = +1
Query: 256 EMRHRAKEVX*PSXTPXXTEIVTNWDDMXKXWHHTFYNELRVAPXEHPXLLTEAPLNPXA 435
E+RH V S T E + D+ K EL+V P ++ LL+ P
Sbjct: 228 EIRHNGDFVRPISATDPSVERYSIDKDVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTV 287
Query: 436 XRXKMTQIMFETXNTPXMYVXIQAVLSLYASGRTTGI 546
++ QI E + Q L LYA TTG+
Sbjct: 288 LIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGV 324
>AL034391-1|CAA22302.2| 333|Caenorhabditis elegans Hypothetical
protein Y40H4A.2 protein.
Length = 333
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 221 HALMAGPSHDRGEHGARSIMLLRNRPCTYRSHCXL 117
H + G DRG G ++MLL C Y H L
Sbjct: 107 HYVFLGDYVDRGRQGIETVMLLMAYHCLYPDHLFL 141
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 194 RGKAPPSGRDGRXGTEG 244
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical
protein Y67D8A.1 protein.
Length = 1020
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 82 IQDVRRRSCRVGSXQWLRYVQGRFRRSMMLLAP 180
++ V RR+C++ +RY GR ++M LAP
Sbjct: 523 LEKVYRRACQLRLWWLVRYCAGRLHKAMNSLAP 555
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 564 TVSPTPCPSTKDTHSPTPXCVXTXAGPTSQTTX*RSXPSAGT 689
T +PT T T +PT T PT+ TT + P+ T
Sbjct: 117 TTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTT 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,634,412
Number of Sequences: 27780
Number of extensions: 248353
Number of successful extensions: 827
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -