Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2231
(559 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 97 8e-21
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 33 0.18
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 32 0.32
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 32 0.32
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 32 0.32
Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical pr... 30 0.98
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 30 0.98
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 30 0.98
Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.3
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 30 1.3
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 30 1.3
Z81595-2|CAB04749.1| 527|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical pr... 28 4.0
AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical... 28 4.0
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 5.2
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 28 5.2
AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical... 28 5.2
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 28 5.2
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 27 6.9
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 27 6.9
Z81528-5|CAB04287.1| 698|Caenorhabditis elegans Hypothetical pr... 27 9.1
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 97.1 bits (231), Expect = 8e-21
Identities = 47/106 (44%), Positives = 71/106 (66%)
Frame = +3
Query: 108 QKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQFRKSFYT 287
+ KG+++E N+D ++ ++ DI+ AAA+L K R L + DH+ + Y +F+K+FY
Sbjct: 214 EPEKGQVLE-NEDNMDMVIDDF--DIETAAASLCHKGRM-LAQTDHSKVYYRKFKKNFYI 269
Query: 288 EVNELARMTPEEVETYRTELEGIRVKGKGCPKPIRTWAHCGISKKV 425
E E+ RMT EV+ YR EL+ I VKG CPKPI+TWA CG++ K+
Sbjct: 270 ETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKM 315
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 153 EYSSEEETEDIK---DAAANLASKQRK---DLIKVDHASLDYMQFRKSFYTEVNELARMT 314
EY + E +D + D N+ +K L +DH+ + Y +F K+FY E ++ R+
Sbjct: 181 EYKEKHENDDEQLEYDEDGNIIWSWKKVIDPLPDIDHSQIQYQKFNKNFYEEHEDIKRLH 240
Query: 315 PEEVETYRTELEGIRVKGKGCPKPIRTWAHCGISKKVPE 431
+V + + +RV G P+P+ ++AH K + E
Sbjct: 241 YMDVIRLQNTM-NLRVGGLKPPRPVCSFAHFSFDKLLME 278
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +3
Query: 132 EQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQFRKSFYTEVNELARM 311
E+N E T D K+ + K+ K KV H D +R + EL+ M
Sbjct: 225 EKNSFYQEMMENRRTVDEKEQEMHRLEKELKKEKKVAH---DDRHWR------MKELSEM 275
Query: 312 TPEEVETYRTELEGIRVKGKGCPKPIRTWAHCGISKKV 425
+ + +R + I +KG P+P+R W G +V
Sbjct: 276 SDRDWRIFREDFN-ISIKGGRVPRPLRNWEEAGFPDEV 312
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 31.9 bits (69), Expect = 0.32
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = +3
Query: 90 KKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQF 269
KKK+ + + + E + D ++ EEE + +DA A +A+ R+ ++ V+ L+ +
Sbjct: 19 KKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR-IVLVEE-DLERTED 76
Query: 270 RKSFYTEVNELARMTPEEVETYRTELE 350
R T E A +E + R +E
Sbjct: 77 RLKTATSKLEQATKAADEADRARKSME 103
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 31.9 bits (69), Expect = 0.32
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = +3
Query: 90 KKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQF 269
KKK+ + + + E + D ++ EEE + +DA A +A+ R+ ++ V+ L+ +
Sbjct: 19 KKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR-IVLVEE-DLERTED 76
Query: 270 RKSFYTEVNELARMTPEEVETYRTELE 350
R T E A +E + R +E
Sbjct: 77 RLKTATSKLEQATKAADEADRARKSME 103
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 31.9 bits (69), Expect = 0.32
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = +3
Query: 90 KKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQF 269
KKK+ + + + E + D ++ EEE + +DA A +A+ R+ ++ V+ L+ +
Sbjct: 19 KKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR-IVLVEE-DLERTED 76
Query: 270 RKSFYTEVNELARMTPEEVETYRTELE 350
R T E A +E + R +E
Sbjct: 77 RLKTATSKLEQATKAADEADRARKSME 103
>Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical
protein T13F2.7 protein.
Length = 663
Score = 30.3 bits (65), Expect = 0.98
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +3
Query: 90 KKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAAN---LASKQRKDLIKVDHASLDY 260
K++ ++ K K + D SSEE+ + DA K RK+ +SL
Sbjct: 547 KQQASKSKKKKPATSDSSDSTSSSSEEDFDGPVDARKRRKLRRKKDRKNPRTTTASSLLD 606
Query: 261 MQFRKSFYTEVNELARMTPEEVETYRTELEGI 356
FR+ F LA+MTP + + L I
Sbjct: 607 PTFRQMFENRKTILAQMTPAHKSAFVSALTQI 638
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = +3
Query: 90 KKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQF 269
KKK+ + + + E + D ++ EEE + +DA A +A+ R+ ++ V+ L+ +
Sbjct: 19 KKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR-IVLVEE-DLERTED 76
Query: 270 RKSFYTEVNELARMTPEEVETYRTEL 347
R T E A +E + R L
Sbjct: 77 RLKTATSKLEQATKAADEADRSRRAL 102
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = +3
Query: 90 KKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQF 269
KKK+ + + + E + D ++ EEE + +DA A +A+ R+ ++ V+ L+ +
Sbjct: 19 KKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRR-IVLVEE-DLERTED 76
Query: 270 RKSFYTEVNELARMTPEEVETYRTEL 347
R T E A +E + R L
Sbjct: 77 RLKTATSKLEQATKAADEADRSRRAL 102
>Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical
protein T26C5.2 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 204 LASKQRKDLIKVDHASLDYMQFRKSFYTEVNE 299
+ +K+R DL V +S Y+Q KSF EVNE
Sbjct: 261 VGAKRRPDLKPVTISSTSYIQKAKSFLDEVNE 292
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 90 KKKVTEQKNKGELIEQNQDGLEYSSEE----ETEDIKDAAANLASKQRKDLIK 236
+++++E+KN + + EYSSEE E E+ K + N S+++ DL++
Sbjct: 1480 EERLSEKKNYRKYERDEEQSDEYSSEETYDYEQENTKKSQKNQRSQKKSDLVE 1532
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 90 KKKVTEQKNKGELIEQNQDGLEYSSEE----ETEDIKDAAANLASKQRKDLIK 236
+++++E+KN + + EYSSEE E E+ K + N S+++ DL++
Sbjct: 1480 EERLSEKKNYRKYERDEEQSDEYSSEETYDYEQENTKKSQKNQRSQKKSDLVE 1532
>Z81595-2|CAB04749.1| 527|Caenorhabditis elegans Hypothetical
protein T22H2.2 protein.
Length = 527
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +3
Query: 111 KNKGELIEQNQDGLEYSS---EEETEDIKDAAANLASKQRKDLIKVDHASLDYMQFRKSF 281
KN G+ +++ LE +E + K A +A K+ +L+K + + ++ F
Sbjct: 424 KNIGKWLKEGVKPLEVEKRLGDEVGKPYKQATYEMARKRYAELVKECNGRCALVDYKLEF 483
Query: 282 YTEVNELARMTPEEVETYRTELEGIRVKGKGCPKPIRTW 398
Y + ++ E Y T GI + G K W
Sbjct: 484 YNNATKTYKLFDERGFEYFT--SGIHISPHGLEKVRHIW 520
>Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical
protein C39B10.3 protein.
Length = 188
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +3
Query: 99 VTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQFRKS 278
V K E +E+ +D + +++E E+++ AANL +H SL S
Sbjct: 88 VDASKKYDEELEEKRDENKKATKEY-EELEKVAANLKEIMNPGAFMTEHGSLATC----S 142
Query: 279 FYTEVNELARMTPEEV 326
TEV +++ TP+ V
Sbjct: 143 SATEVKNISQTTPQTV 158
>AC087081-12|AAK66039.2| 324|Caenorhabditis elegans Hypothetical
protein Y82E9BL.17 protein.
Length = 324
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 213 WKQDLQRHLLCLPFLLQTNTPSHLDFVLSVHPYFSAQ 103
WK H+ L F + HLDF+LS+ P+F++Q
Sbjct: 156 WKAKKWNHVKKLEF-----SRVHLDFILSIFPHFNSQ 187
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 105 EQKNKGELIEQNQDGLEYSSEEETE-DIKDAAANLASKQRKDLIKVDHASLDYMQFRK 275
E N G+ +E ++ L+ + E + D ++A S+ D+IK HA Y++ R+
Sbjct: 1265 EFDNLGDSVESVENLLKRHRDLEAKLDAQEARLEAFSRTADDMIKAQHADSAYIEQRR 1322
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 105 EQKNKGELIEQNQDGLEYSSEEETE-DIKDAAANLASKQRKDLIKVDHASLDYMQFRK 275
E N G+ +E ++ L+ + E + D ++A S+ D+IK HA Y++ R+
Sbjct: 1265 EFDNLGDSVESVENLLKRHRDLEAKLDAQEARLEAFSRTADDMIKAQHADSAYIEQRR 1322
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = +3
Query: 90 KKKVTEQKNKGELIEQNQDGLEYSSEE----ETEDIKDAAANLASKQRKDLIKVDHASLD 257
+++++E+KN + E+ + EYS EE E E+ N S+++ DL V+ +
Sbjct: 1482 EERLSEKKNYRKYDERKYESEEYSFEETYDYEQENTNKKQKNQRSQKKSDL--VEKTQIK 1539
Query: 258 YMQFRKSFYTE-VNELARMTPEEVE 329
R F E V E R E VE
Sbjct: 1540 EFSHRICFSVEPVAECRRRGYEAVE 1564
>AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical
protein Y53F4B.12 protein.
Length = 721
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 112 FCSVTFFFGSASKNYNASATCCWNTNNSFGLVHLI 8
FC VT F + +NY CW + F LV ++
Sbjct: 581 FCVVTCAFSAFLRNYAVPTVTCWMLSIGFVLVIVV 615
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 105 EQKNKGELIEQNQDGLEYSSEEETE-DIKDAAANLASKQRKDLIKVDHASLDYMQFRK 275
E N G+ +E ++ L+ + E + D ++A S+ D+IK HA Y++ R+
Sbjct: 1265 EFDNLGDSVESVENLLKRHRDLEAKLDAQEARLEAFSRTADDMIKAQHADSAYIEQRR 1322
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +3
Query: 93 KKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQFR 272
++ TE+++ E Q+ + EEE + K A+ + ++++ + V +FR
Sbjct: 295 ERETEEEDPPSAFETAQE-FDTEDEEEEKKPKRGTASSSKRRKRRRMWVSKKDRRLHEFR 353
Query: 273 KSFYTEVNELARMTP 317
K EV EL P
Sbjct: 354 KKMNQEVKELRSAYP 368
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +3
Query: 93 KKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLASKQRKDLIKVDHASLDYMQFR 272
++ TE+++ E Q+ + EEE + K A+ + ++++ + V +FR
Sbjct: 308 ERETEEEDPPSAFETAQE-FDTEDEEEEKKPKRGTASSSKRRKRRRMWVSKKDRRLHEFR 366
Query: 273 KSFYTEVNELARMTP 317
K EV EL P
Sbjct: 367 KKMNQEVKELRSAYP 381
>Z81528-5|CAB04287.1| 698|Caenorhabditis elegans Hypothetical
protein F35E2.6 protein.
Length = 698
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/71 (23%), Positives = 28/71 (39%)
Frame = +3
Query: 186 KDAAANLASKQRKDLIKVDHASLDYMQFRKSFYTEVNELARMTPEEVETYRTELEGIRVK 365
K A LA K+ +L+K + + ++ FY + ++ E Y T GI +
Sbjct: 623 KQATYELARKRYAELVKECNGRCGLVDYKLEFYNNATKTYKLFDERGFEYFT--SGIHIS 680
Query: 366 GKGCPKPIRTW 398
G K W
Sbjct: 681 PHGLEKVRHIW 691
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,247,787
Number of Sequences: 27780
Number of extensions: 209631
Number of successful extensions: 813
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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