Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2228
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82053-9|CAJ85768.1| 189|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z82053-8|CAB61018.2| 309|Caenorhabditis elegans Hypothetical pr... 31 0.39
U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin ... 31 0.39
AF070968-1|AAD15926.1| 309|Caenorhabditis elegans PAR-6 protein. 31 0.39
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical pr... 30 0.90
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 29 1.6
AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical ... 29 1.6
Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical p... 29 2.1
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 28 4.8
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 28 4.8
AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical ... 28 4.8
Z81542-6|CAE17834.1| 365|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical ... 27 6.3
AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin... 27 6.3
Z82052-9|CAB04825.2| 338|Caenorhabditis elegans Hypothetical pr... 27 8.4
U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin ... 27 8.4
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 27 8.4
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 27 8.4
>Z82053-9|CAJ85768.1| 189|Caenorhabditis elegans Hypothetical
protein T26E3.3b protein.
Length = 189
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 157 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 300
+T+K + R R + + T A E +A AA T + RP MKMNGS
Sbjct: 123 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 169
>Z82053-8|CAB61018.2| 309|Caenorhabditis elegans Hypothetical
protein T26E3.3a protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 157 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 300
+T+K + R R + + T A E +A AA T + RP MKMNGS
Sbjct: 243 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 289
>U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin
protein 5 protein.
Length = 419
Score = 31.5 bits (68), Expect = 0.39
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +3
Query: 90 NGRILEPPVPSLCVQRNIHERYADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVS 269
NG P +C + +ADN Y ++ L ++ A+ C Q C +L S
Sbjct: 137 NGNCESDPRAFVC---ELPATHADNCTYNYNGHCFTLHTERNTFVQAQAICEQECGNLAS 193
Query: 270 LETSDENEWVKA 305
+ +S+EN ++ +
Sbjct: 194 IHSSNENRYLSS 205
>AF070968-1|AAD15926.1| 309|Caenorhabditis elegans PAR-6 protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 157 LTIKDTSSRGGTQRSAASKKTG*AQETTADNAAWT*YLSRPAMKMNGS 300
+T+K + R R + + T A E +A AA T + RP MKMNGS
Sbjct: 243 ITVKPANQRNTLSRGPSQQGTPNASEMSAATAAATGGIQRP-MKMNGS 289
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 30.7 bits (66), Expect = 0.68
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 210 EEDWLSARNYCRQRCMDLVSLETSDENEWV 299
E ++ A+N C Q C DL ++ T++EN ++
Sbjct: 175 EASFVVAQNTCEQFCGDLATIHTANENRYI 204
>Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical
protein F49A5.2 protein.
Length = 379
Score = 30.3 bits (65), Expect = 0.90
Identities = 9/26 (34%), Positives = 21/26 (80%)
Frame = +3
Query: 228 ARNYCRQRCMDLVSLETSDENEWVKA 305
A+ +C+ +C +LVS+ +++EN +V++
Sbjct: 267 AQTFCKTKCANLVSINSANENRYVQS 292
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 29.5 bits (63), Expect = 1.6
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +3
Query: 201 RGVEEDWLSARNYCRQRCMDLVSLETSDENEWV 299
R +++WL+AR +C DL ++ ++ +W+
Sbjct: 62 RAGDQNWLTAREHCLSLNADLAAIRNVEQLDWI 94
>AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.2 protein.
Length = 355
Score = 29.5 bits (63), Expect = 1.6
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +3
Query: 228 ARNYCRQRCMDLVSLETSDENEWVKA 305
A+ C+ RC +LVS+ +++EN ++++
Sbjct: 253 AQEICKTRCANLVSISSANENRFIRS 278
>Z81593-11|CAI94505.2| 360|Caenorhabditis elegans Hypothetical
protein T20B3.16 protein.
Length = 360
Score = 29.1 bits (62), Expect = 2.1
Identities = 8/26 (30%), Positives = 21/26 (80%)
Frame = +3
Query: 228 ARNYCRQRCMDLVSLETSDENEWVKA 305
A+ +C+ +C ++VS+ +++EN +V++
Sbjct: 258 AQKFCKTKCANVVSINSANENRYVQS 283
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 228 ARNYCRQRCMDLVSLETSDENEWVKARIVHXXIKYI 335
A++ C+Q C +LVS+ + +EN +V++ YI
Sbjct: 189 AQSACQQECGNLVSIHSDEENNFVQSLFTTNSPTYI 224
>Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical
protein T25E12.8 protein.
Length = 363
Score = 28.7 bits (61), Expect = 2.7
Identities = 8/27 (29%), Positives = 20/27 (74%)
Frame = +3
Query: 222 LSARNYCRQRCMDLVSLETSDENEWVK 302
+ A+ +C +C +LVS+ +++EN +++
Sbjct: 261 VEAQRFCNTKCANLVSIHSANENRFIQ 287
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 87 PNGRILEPPVPSLCVQRNIHERYADNKGYFFSWRDPALRGV 209
PN + PPVP + ++ER A +KG+F S ++ ++ +
Sbjct: 1056 PNAKTTAPPVPQKQPELALNERKA-SKGWFGSIKEKVIKSI 1095
>Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical
protein E03H4.10 protein.
Length = 416
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 153 YADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVK 302
+AD+ Y ++ E ++ A+ C + DLVS+ +S+EN +++
Sbjct: 157 HADDCTYNYNGYCYTFSSTAEPFIIAQTKCAETYGDLVSIHSSNENRYIE 206
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Frame = -3
Query: 108 APGCVHW--GTVPGPPPLA--QVIRVLMSSFSRCVQEP 7
APG ++ G + GPPPL+ Q+ +L+ +F+R + +P
Sbjct: 367 APGSLYGLEGMLQGPPPLSQDQLNSILLGAFTRHLSDP 404
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Frame = -3
Query: 108 APGCVHW--GTVPGPPPLA--QVIRVLMSSFSRCVQEP 7
APG ++ G + GPPPL+ Q+ +L+ +F+R + +P
Sbjct: 511 APGSLYGPEGLLQGPPPLSQDQLNSILLGAFTRHLSDP 548
>AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical
protein M151.7 protein.
Length = 416
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Frame = -3
Query: 108 APGCVHW--GTVPGPPPLA--QVIRVLMSSFSRCVQEP 7
APG ++ G + GPPPL+ Q+ +L+ +F+R + +P
Sbjct: 52 APGSLYGPEGLLQGPPPLSQDQLNSILLGAFTRHLSDP 89
>Z81542-6|CAE17834.1| 365|Caenorhabditis elegans Hypothetical
protein F49A5.9 protein.
Length = 365
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +3
Query: 228 ARNYCRQRCMDLVSLETSDENEWVKA 305
++ +CR C +LVS+ +++EN +V++
Sbjct: 263 SQKFCRSICGNLVSITSANENRYVQS 288
>AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.3 protein.
Length = 355
Score = 27.5 bits (58), Expect = 6.3
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 228 ARNYCRQRCMDLVSLETSDENEWVKA 305
A +C+ C ++VS+ + DE+ +V++
Sbjct: 256 AHEFCKPMCAEVVSINSGDESRYVQS 281
>AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin
protein 2 protein.
Length = 411
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 225 SARNYCRQRCMDLVSLETSDENEWVKARIVH 317
+A+ C + C +LVS+ +++EN +V H
Sbjct: 174 TAQTICEEECGNLVSIHSANENRYVMTIASH 204
>Z82052-9|CAB04825.2| 338|Caenorhabditis elegans Hypothetical
protein T25E12.7 protein.
Length = 338
Score = 27.1 bits (57), Expect = 8.4
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = +3
Query: 228 ARNYCRQRCMDLVSLETSDENEWV 299
A+N+C ++C +LVS+ +++E ++
Sbjct: 235 AQNFCLEKCANLVSIHSANEVRFI 258
>U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin
protein 6 protein.
Length = 407
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 168 GYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARI 311
G+ +S+ PA + A+ C Q C +L S+ +S+EN ++ + I
Sbjct: 165 GHCYSFHQPAT------FAQAQVICEQECGNLASIHSSNENRYLSSII 206
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 49 YYLR*RWWPRHSSPMDASWSLRCLLCVYRETSMRDTLTIKDTSSRGGTQRSA-ASKKT 219
Y+ R + + + W+ RC +R+T + D L ++T+S T+ + S KT
Sbjct: 523 YFARSNRFAFNDDETEREWTSRCQQSSWRDTEVDDELKKRETTSEKFTETTTNGSTKT 580
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 49 YYLR*RWWPRHSSPMDASWSLRCLLCVYRETSMRDTLTIKDTSSRGGTQRSA-ASKKT 219
Y+ R + + + W+ RC +R+T + D L ++T+S T+ + S KT
Sbjct: 523 YFARSNRFAFNDDETEREWTSRCQQSSWRDTEVDDELKKRETTSEKFTETTTNGSTKT 580
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,758,518
Number of Sequences: 27780
Number of extensions: 271155
Number of successful extensions: 682
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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