Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2223
         (500 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    25   1.4  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   2.5  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    23   4.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.7  

>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 185 ERIRMETYTLLTEVRREGPMVVGCLNLNLNAVREVTGIREIYI 57
           ER+  E   LL    R+   +V C+ + L    + TG+RE  I
Sbjct: 59  ERLDQEYNLLLYPADRDTMCLVRCIGVLLRFWNDTTGLREATI 101


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = +3

Query: 75  ARNLANGIQIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVK 254
           A  +  GI   +      +AL + L K+ +   T  L E R++    R      + ELVK
Sbjct: 382 AEVVLTGIDNMIDEEAIKKALMTTLGKQSL-VATVNLWERRDMTKRARVRLPRAEAELVK 440

Query: 255 ADLLEQGLPVNSVH 296
              LE G    SVH
Sbjct: 441 DRRLELGYTYCSVH 454


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 316 PRPVCIRCTEFTGRPCSNRSAFT 248
           P P C     F+   C NR+ +T
Sbjct: 421 PEPECFDPDRFSAEACRNRTPYT 443


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 364  SGVGWRATRTILYGSLPRPVCIRCT 290
            SG G+        G  P P CIRCT
Sbjct: 945  SGHGFFRDDLCRMGFTPSPDCIRCT 969


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 113 LNLNLNAVREVTGIREIYIFGLKGQANSIPS 21
           LNLNLN  R   G R +   G     +S PS
Sbjct: 877 LNLNLNLDRSEAGGRSLCTNGSSSGRDSQPS 907


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,688
Number of Sequences: 2352
Number of extensions: 8576
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)