Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2213
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64347-1|AAA58470.1|  731|Homo sapiens fgflr protein.                  31   4.0  
M58051-1|AAA52450.1|  806|Homo sapiens fibroblast growth factor ...    31   4.0  
BC128610-1|AAI28611.1|  480|Homo sapiens FGFR3 protein protein.        31   4.0  
BC121175-1|AAI21176.1|  480|Homo sapiens FGFR3 protein protein.        31   4.0  
AY768549-1|AAU89726.1|  806|Homo sapiens fibroblast growth facto...    31   4.0  
AF487554-2|AAM22078.1|  769|Homo sapiens fibroblast growth facto...    31   4.0  
AF487554-1|AAM22079.1|  771|Homo sapiens fibroblast growth facto...    31   4.0  
AF245114-1|AAF63380.1|  694|Homo sapiens fibroblast growth facto...    31   4.0  

>M64347-1|AAA58470.1|  731|Homo sapiens fgflr protein.
          Length = 731

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 283 VSMSQPIREXFPGGXPTGFSASAGGTSVFASISLP 179
           + +S P  +  PGG  T  S+S+G  SVFA   LP
Sbjct: 686 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 720


>M58051-1|AAA52450.1|  806|Homo sapiens fibroblast growth factor
           receptor protein.
          Length = 806

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 283 VSMSQPIREXFPGGXPTGFSASAGGTSVFASISLP 179
           + +S P  +  PGG  T  S+S+G  SVFA   LP
Sbjct: 761 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 795


>BC128610-1|AAI28611.1|  480|Homo sapiens FGFR3 protein protein.
          Length = 480

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 283 VSMSQPIREXFPGGXPTGFSASAGGTSVFASISLP 179
           + +S P  +  PGG  T  S+S+G  SVFA   LP
Sbjct: 435 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 469


>BC121175-1|AAI21176.1|  480|Homo sapiens FGFR3 protein protein.
          Length = 480

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 283 VSMSQPIREXFPGGXPTGFSASAGGTSVFASISLP 179
           + +S P  +  PGG  T  S+S+G  SVFA   LP
Sbjct: 435 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 469


>AY768549-1|AAU89726.1|  806|Homo sapiens fibroblast growth factor
           receptor 3 (achondroplasia, thanatophoric dwarfism)
           protein.
          Length = 806

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 283 VSMSQPIREXFPGGXPTGFSASAGGTSVFASISLP 179
           + +S P  +  PGG  T  S+S+G  SVFA   LP
Sbjct: 761 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 795


>AF487554-2|AAM22078.1|  769|Homo sapiens fibroblast growth factor
           receptor 3 protein.
          Length = 769

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 283 VSMSQPIREXFPGGXPTGFSASAGGTSVFASISLP 179
           + +S P  +  PGG  T  S+S+G  SVFA   LP
Sbjct: 724 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 758


>AF487554-1|AAM22079.1|  771|Homo sapiens fibroblast growth factor
           receptor 3 protein.
          Length = 771

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 283 VSMSQPIREXFPGGXPTGFSASAGGTSVFASISLP 179
           + +S P  +  PGG  T  S+S+G  SVFA   LP
Sbjct: 726 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 760


>AF245114-1|AAF63380.1|  694|Homo sapiens fibroblast growth factor
           receptor 3 protein.
          Length = 694

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 283 VSMSQPIREXFPGGXPTGFSASAGGTSVFASISLP 179
           + +S P  +  PGG  T  S+S+G  SVFA   LP
Sbjct: 649 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 683


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,133,883
Number of Sequences: 237096
Number of extensions: 1833718
Number of successful extensions: 5784
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5784
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)