Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2213
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 29 3.2
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 5.6
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 5.6
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 5.6
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 5.6
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 5.6
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 28 7.4
Z77657-5|CAB01145.2| 381|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +3
Query: 282 TTGRRLIDEICQIAAYTPKQTY--SQYIMPYGD-----LNPGARRRHNVRV-VTVGRYXM 437
T+G+ ++IC I TP+ Y + +MP+ D +NP R V++ +T
Sbjct: 162 TSGKLKFNKICSIRVITPRPNYNPNDLVMPHSDDEEDTMNPNRERLSTVKLRLTPTSQAK 221
Query: 438 LKDMVSHKI 464
L+ M S +
Sbjct: 222 LEQMQSEDV 230
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 626 NDPTGRTLSKPPRSIVGLNLLGSWYIRMTLPSP 528
+DPTG ++KP R LNL G +R+ +P
Sbjct: 3313 SDPTGNVVAKPRRMAPKLNLAGLLDLRIKAGTP 3345
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 626 NDPTGRTLSKPPRSIVGLNLLGSWYIRMTLPSP 528
+DPTG ++KP R LNL G +R+ +P
Sbjct: 3842 SDPTGNVVAKPRRMAPKLNLAGLLDLRIKAGTP 3874
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 626 NDPTGRTLSKPPRSIVGLNLLGSWYIRMTLPSP 528
+DPTG ++KP R LNL G +R+ +P
Sbjct: 3523 SDPTGNVVAKPRRMAPKLNLAGLLDLRIKAGTP 3555
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 626 NDPTGRTLSKPPRSIVGLNLLGSWYIRMTLPSP 528
+DPTG ++KP R LNL G +R+ +P
Sbjct: 3313 SDPTGNVVAKPRRMAPKLNLAGLLDLRIKAGTP 3345
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 626 NDPTGRTLSKPPRSIVGLNLLGSWYIRMTLPSP 528
+DPTG ++KP R LNL G +R+ +P
Sbjct: 3842 SDPTGNVVAKPRRMAPKLNLAGLLDLRIKAGTP 3874
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 626 NDPTGRTLSKPPRSIVGLNLLGSWYIRMTLPSP 528
+DPTG ++KP R LNL G +R+ +P
Sbjct: 3523 SDPTGNVVAKPRRMAPKLNLAGLLDLRIKAGTP 3555
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 626 NDPTGRTLSKPPRSIVGLNLLGSWYIRMTLPSP 528
+DPTG ++KP R LNL G +R+ +P
Sbjct: 2732 SDPTGNVVAKPRRMAPKLNLAGLLDLRIKAGTP 2764
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 183 SEMXANTEVPPALAEKPVGXPPGKXSLIGWDMDTTGRRLIDEI 311
SEM + T A K VG PPG +++ + + G+RL+D +
Sbjct: 200 SEMTSVTAWVLMHAFKLVGFPPGVVNMVIGEGKSAGQRLVDHV 242
>Z77657-5|CAB01145.2| 381|Caenorhabditis elegans Hypothetical
protein F08H9.8 protein.
Length = 381
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 250 PGGXPTGFSASAGGTSVFASISLPFTF 170
P + + S GGT VF S+S FTF
Sbjct: 48 PFSETSSYCQSLGGTQVFISLSYEFTF 74
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 267 GWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 413
G+D+ TTG L + C ++ +T S Y +N R+R VR+
Sbjct: 453 GFDLTTTGDTLFECECGFKSWNGNRTASHYHKCRRSINDIERKREIVRL 501
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 267 GWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 413
G+D+ TTG L + C ++ +T S Y +N R+R VR+
Sbjct: 450 GFDLTTTGDTLFECECGFKSWNGNRTASHYHKCRRSINDIERKREIVRL 498
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 267 GWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 413
G+D+ TTG L + C ++ +T S Y +N R+R VR+
Sbjct: 451 GFDLTTTGDTLFECECGFKSWNGNRTASHYHKCRRSINDIERKREIVRL 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,548,243
Number of Sequences: 27780
Number of extensions: 270997
Number of successful extensions: 655
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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