Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2197
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 266 3e-70
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 93 4e-18
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 85 2e-15
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 83 5e-15
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 81 2e-14
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 81 3e-14
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 69 8e-11
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 43 1e-09
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 63 5e-09
UniRef50_UPI0000D578A4 Cluster: PREDICTED: similar to RNA-direct... 63 5e-09
UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-direct... 62 2e-08
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 60 5e-08
UniRef50_Q4EC81 Cluster: Pol protein; n=2; Wolbachia endosymbion... 56 1e-06
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 55 1e-06
UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to endonuclea... 53 6e-06
UniRef50_UPI0000587485 Cluster: PREDICTED: similar to endonuclea... 53 6e-06
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 53 8e-06
UniRef50_UPI0000E46F21 Cluster: PREDICTED: similar to endonuclea... 52 1e-05
UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6... 50 7e-05
UniRef50_UPI0000E46F02 Cluster: PREDICTED: similar to endonuclea... 49 9e-05
UniRef50_UPI0000E47DE5 Cluster: PREDICTED: similar to endonuclea... 49 1e-04
UniRef50_UPI0000E467A7 Cluster: PREDICTED: hypothetical protein,... 49 1e-04
UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Re... 48 2e-04
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 48 3e-04
UniRef50_UPI0000E4A5CE Cluster: PREDICTED: similar to Gamma-glut... 47 4e-04
UniRef50_UPI0000E483B1 Cluster: PREDICTED: similar to endonuclea... 47 4e-04
UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Re... 47 5e-04
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 46 7e-04
UniRef50_UPI00015B46F3 Cluster: PREDICTED: similar to reverse tr... 46 0.001
UniRef50_Q8UUM3 Cluster: ReO_6 protein; n=3; Percomorpha|Rep: Re... 46 0.001
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 46 0.001
UniRef50_UPI0000E477B8 Cluster: PREDICTED: similar to endonuclea... 45 0.002
UniRef50_UPI0000E4718F Cluster: PREDICTED: similar to UDP-glucur... 44 0.004
UniRef50_Q4QQE9 Cluster: Endonuclease-reverse transcriptase; n=1... 44 0.004
UniRef50_UPI0000E46F82 Cluster: PREDICTED: similar to ENSANGP000... 44 0.005
UniRef50_UPI000058923D Cluster: PREDICTED: similar to endonuclea... 44 0.005
UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Re... 43 0.006
UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1; ... 43 0.006
UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from... 43 0.006
UniRef50_UPI0000E488CB Cluster: PREDICTED: similar to endonuclea... 43 0.008
UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1 r... 42 0.011
UniRef50_UPI00015B4665 Cluster: PREDICTED: similar to Lian-Aa1 r... 42 0.011
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 42 0.014
UniRef50_Q4QQE2 Cluster: Endonuclease-reverse transcriptase; n=3... 42 0.014
UniRef50_UPI0000E493DE Cluster: PREDICTED: similar to endonuclea... 42 0.019
UniRef50_UPI000069DFFE Cluster: UPI000069DFFE related cluster; n... 42 0.019
UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-direct... 41 0.025
UniRef50_Q86GH0 Cluster: Pol protein; n=1; Drosophila americana|... 41 0.025
UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1 retr... 41 0.025
UniRef50_UPI0000E47148 Cluster: PREDICTED: similar to endonuclea... 41 0.033
UniRef50_UPI000058732A Cluster: PREDICTED: similar to endonuclea... 41 0.033
UniRef50_Q6IH44 Cluster: HDC03386; n=1; Drosophila melanogaster|... 41 0.033
UniRef50_UPI00015B48A6 Cluster: PREDICTED: similar to ORF2-encod... 40 0.044
UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.... 40 0.076
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p... 39 0.10
UniRef50_UPI0000E47234 Cluster: PREDICTED: hypothetical protein;... 39 0.10
UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetic... 39 0.10
UniRef50_O46180 Cluster: Non-LTR retrotransposon reverse transcr... 39 0.10
UniRef50_UPI0000E4A76C Cluster: PREDICTED: hypothetical protein;... 39 0.13
UniRef50_UPI0000E4A3C4 Cluster: PREDICTED: similar to endonuclea... 39 0.13
UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_Q6II19 Cluster: HDC20041; n=1; Drosophila melanogaster|... 39 0.13
UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_UPI0000E45C58 Cluster: PREDICTED: similar to endonuclea... 38 0.18
UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to endonuclea... 38 0.23
UniRef50_A7SVR1 Cluster: Predicted protein; n=14; Nematostella v... 38 0.23
UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like p... 38 0.31
UniRef50_UPI0000E49FFD Cluster: PREDICTED: similar to endonuclea... 38 0.31
UniRef50_UPI0000E482C4 Cluster: PREDICTED: similar to endonuclea... 38 0.31
UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetic... 38 0.31
UniRef50_Q4QQD9 Cluster: Reverse transcriptase; n=1; Schistosoma... 38 0.31
UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse tr... 36 0.71
UniRef50_UPI00006CD1CA Cluster: hypothetical protein TTHERM_0012... 36 0.71
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 36 0.71
UniRef50_UPI0000E47D32 Cluster: PREDICTED: similar to endonuclea... 36 0.94
UniRef50_O18520 Cluster: Pol; n=6; Bilateria|Rep: Pol - Schistos... 36 0.94
UniRef50_UPI00015B4793 Cluster: PREDICTED: similar to Histone-ly... 36 1.2
UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like p... 35 1.6
UniRef50_UPI0000E48EFD Cluster: PREDICTED: similar to reverse tr... 35 1.6
UniRef50_Q91844 Cluster: X.laevis unknown protein; n=1; Xenopus ... 35 1.6
UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles g... 35 1.6
UniRef50_UPI00015B461D Cluster: PREDICTED: similar to ORF2-encod... 35 2.2
UniRef50_Q3LG56 Cluster: ORF2-encoded protein; n=4; Bilateria|Re... 35 2.2
UniRef50_UPI0000E47B3C Cluster: PREDICTED: similar to pol protei... 34 2.9
UniRef50_Q8SY74 Cluster: RH47344p; n=1; Drosophila melanogaster|... 34 2.9
UniRef50_A7EJQ0 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_UPI0000E45C95 Cluster: PREDICTED: similar to endonuclea... 34 3.8
UniRef50_Q9BKT2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q00068 Cluster: Reverse transcriptase; n=2; Ascobolus i... 34 3.8
UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles g... 33 5.0
UniRef50_Q4F8Q2 Cluster: Reverse transcriptase; n=1; Aedes aegyp... 33 5.0
UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gamb... 33 5.0
UniRef50_UPI00015B6048 Cluster: PREDICTED: similar to ENSANGP000... 33 8.8
UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 266 bits (653), Expect = 3e-70
Identities = 144/230 (62%), Positives = 150/230 (65%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG NDIPRSPPT LALFADDTTVYYSSRNKSLIA KLQSAAL LGQ
Sbjct: 652 GVPQGSVLSPLLFSLFINDIPRSPPTQLALFADDTTVYYSSRNKSLIASKLQSAALTLGQ 711
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
WFRKWRIDINP KSTAVLFQ N+TPPITLF IPWARKVKYLGVTL
Sbjct: 712 WFRKWRIDINPAKSTAVLFQRGNSPLISSRIRRRNITPPITLFGLPIPWARKVKYLGVTL 771
Query: 363 DASMTFRPHIKSVRDRAAFILGRLYPMICKRE*NVPSEQGDTLQNLHKARHDLREXGXRS 542
DASMTFRPHIK+VRDRAAFILGRLYPMICKR + TL +
Sbjct: 772 DASMTFRPHIKTVRDRAAFILGRLYPMICKRS-KMSLRNKVTLYKTCIRPVMTYASVVFA 830
Query: 543 RGPYTHRHPLISTIPLFAG*PSELPXFVRNVDLHDDLGLESXQKYMKSAS 692
TH L S F P FVRNVDLHDDLGLES +K+MKS S
Sbjct: 831 HAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKHMKSVS 880
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/37 (89%), Positives = 33/37 (89%)
Frame = +1
Query: 457 SKMSLRNKVTLYKTCIRPVMTYASXXXAHAXRTHIDT 567
SKMSLRNKVTLYKTCIRPVMTYAS AHA RTHIDT
Sbjct: 803 SKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDT 839
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 93.5 bits (222), Expect = 4e-18
Identities = 58/230 (25%), Positives = 100/230 (43%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG +DIP++ T LA++ADDT + S+ + + LQ + +
Sbjct: 1115 GVPQGSVLSPLLYSIFTHDIPKTDRTTLAIYADDTAILTRSKQPYMATRYLQESVECIEN 1174
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W R+W I++NP KS A+L + +F+ IPW+ +VKYLGV L
Sbjct: 1175 WCRRWLINVNPDKSRALLLARRRVSPDGF----------VRMFNADIPWSDQVKYLGVIL 1224
Query: 363 DASMTFRPHIKSVRDRAAFILGRLYPMICKRE*NVPSEQGDTLQNLHKARHDLREXGXRS 542
D ++F PH+ + G L ++C+R + +++ +
Sbjct: 1225 DKKLSFGPHLDYALAKGKMATGMLRSLVCRRSALSIDNKLLLYKSVIRPTMTYASVAWAF 1284
Query: 543 RGPYTHRHPLISTIPLFAG*PSELPXFVRNVDLHDDLGLESXQKYMKSAS 692
T H L + F P FVRN LH ++ + + +++ + +
Sbjct: 1285 APCKTRMHKLQTFQNKFLRQAFNAPWFVRNNQLHREVKMPTMEEFFRETA 1334
Score = 36.7 bits (81), Expect = 0.54
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 457 SKMSLRNKVTLYKTCIRPVMTYASXXXAHA 546
S +S+ NK+ LYK+ IRP MTYAS A A
Sbjct: 1256 SALSIDNKLLLYKSVIRPTMTYASVAWAFA 1285
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; n=80;
Culicimorpha|Rep: Reverse transcriptase homolog protein -
Chironomus thummi
Length = 883
Score = 84.6 bits (200), Expect = 2e-15
Identities = 45/150 (30%), Positives = 73/150 (48%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG D+ R ++ LFADDT +Y+S+ N + I LQ + Q
Sbjct: 649 GVPQGAVLSPTLYNIFTYDVVRETTNNIGLFADDTALYHSAENSADIVTHLQHTGRKVQQ 708
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
+ KW+I++N K+ A+ I +++I W + KYLG+ +
Sbjct: 709 YMNKWKINLNKQKTQALFITNRHSRQLPGNN--------IKFLNENIKWETEAKYLGMVI 760
Query: 363 DASMTFRPHIKSVRDRAAFILGRLYPMICK 452
D +T +PH++ V +RA L +LYP+I +
Sbjct: 761 DNRVTLKPHVEYVTNRAHTALRQLYPLISR 790
Score = 33.9 bits (74), Expect = 3.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 460 KMSLRNKVTLYKTCIRPVMTYASXXXAHAXRTHI 561
++ +RNK+ +YK IRP+ TY +TH+
Sbjct: 793 QLDVRNKLLIYKLAIRPIFTYGCSAFGSMAKTHL 826
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 83.4 bits (197), Expect = 5e-15
Identities = 45/151 (29%), Positives = 71/151 (47%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG +DI ++ T LA++ADDT + S+ + + LQ + +
Sbjct: 206 GVPQGSVLSPLLYSIFTHDIHKTDRTTLAIYADDTAILTRSKQPYMATRYLQESVERIEN 265
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W +W I++NP KS A+L + +F+ IPW+ VKYLGV L
Sbjct: 266 WCCRWLINVNPDKSRALLLARRIVSPDGF----------VRMFNADIPWSDHVKYLGVIL 315
Query: 363 DASMTFRPHIKSVRDRAAFILGRLYPMICKR 455
D ++F PH+ + G L ++C+R
Sbjct: 316 DKKLSFGPHLDYALAKGKMATGMLRSLVCRR 346
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 457 SKMSLRNKVTLYKTCIRPVMTYASXXXAHA 546
S +S+ NK+ LYK+ IRP MTYA A A
Sbjct: 347 SALSIDNKLLLYKSVIRPTMTYAPVAWAFA 376
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 81.4 bits (192), Expect = 2e-14
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG +D+P+ P T LAL+ADDT + +SR+ LI ++LQ +L
Sbjct: 242 GVPQGSVLSPTLYNIYTHDVPKHPKTDLALYADDTAIIATSRSPQLITQRLQEHTDSLIN 301
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
++ K IN K+ A+LF I + +Q+I W +++KY+G+TL
Sbjct: 302 YYAK----INLNKTQAILFTKRRASQHQN----------ILINNQAIEWIKQIKYMGLTL 347
Query: 363 DASMTFRPHIKSVRDRAAFILGRLYPMIC-KRE*NVPSEQGDTLQNLHK-ARHDLREXGX 536
D S+T++ H+ + ++ L L ++C K N+ +++ L L + G
Sbjct: 348 DTSLTYKTHLINAANKTKSALKSLNSLLCRKTHLNLANKRLLYLSTLRPILSYASPCWGS 407
Query: 537 RSRGPYTHRHPLISTIPLFAG*PSELPXFVRNVDLHDDLGLESXQKYMK 683
+ +H +++ S P F+RN +L DL + + + ++K
Sbjct: 408 AASSNLSH---ILTVQNKIIRQISNAPWFIRNKNLEKDLKIPNLKDFIK 453
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep: ORF1
- Drosophila melanogaster (Fruit fly)
Length = 884
Score = 80.6 bits (190), Expect = 3e-14
Identities = 47/151 (31%), Positives = 72/151 (47%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG +DIP++ L+LFADD VY + + S I + +QS L
Sbjct: 665 GVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDI 724
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
+++KW+I INP K+ A+ F L P I W ++YLG+
Sbjct: 725 YYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSP-------IQWVDNIRYLGIIF 777
Query: 363 DASMTFRPHIKSVRDRAAFILGRLYPMICKR 455
D +TF+ HI + + I+ LYP+I ++
Sbjct: 778 DKKLTFKYHINNTIMKVNKIICTLYPLINRK 808
Score = 35.9 bits (79), Expect = 0.94
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 457 SKMSLRNKVTLYKTCIRPVMTYASXXXAHAXRTHI 561
SK+S+ NK+ ++KT P++ Y S +THI
Sbjct: 809 SKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHI 843
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 69.3 bits (162), Expect = 8e-11
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSP-----PTHLALFADDTTVYYSSRNKSLIAKKLQSAA 167
GVPQG +D+P+ + LA FADD V Y SR + A +Q A
Sbjct: 639 GVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFA 698
Query: 168 LALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKY 347
+W R+W I IN +KS V F PP+ + +P KY
Sbjct: 699 YRFSEWARRWNIGINSSKSNNVCF-----------TLKRRTPPPVYIEEVPVPQPNAAKY 747
Query: 348 LGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 455
LGV LD +TF H+ +R R + + Y ++ R
Sbjct: 748 LGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSR 783
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 42.7 bits (96), Expect(2) = 1e-09
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG +DIP++ T LA++ADDT + S+ + + LQ + +
Sbjct: 682 GVPQGSVLSPLLYSIFTHDIPKTDRTTLAIYADDTAILTRSKQPYMATRYLQESVERIEN 741
Query: 183 WFRK 194
W R+
Sbjct: 742 WCRR 745
Score = 42.7 bits (96), Expect(2) = 1e-09
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 300 ITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMI 446
+ +F+ IPW+ +VKYLGV LD ++F PH+ + G L ++
Sbjct: 752 VRMFNADIPWSDQVKYLGVILDKKLSFGPHLDYALAKGKMATGMLRSIV 800
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 63.3 bits (147), Expect = 5e-09
Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG DIP+ A++ADD V ++R S L + L
Sbjct: 971 GVPQGSKLSPTLFNLYGYDIPQREGIITAIYADDIAVLRTTRQISQCTNLLNKHLVTLID 1030
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPP--ITLFSQSIPWARKVKYLGV 356
W+ WR+ IN +KS + F N TP I + ++ W+ KYLGV
Sbjct: 1031 WYSHWRLSINESKSVDIFFS------------KRNTTPHTCIQIKGHTLKWSNSAKYLGV 1078
Query: 357 TLDASMTFRPHIKSVRDRA--AFI 422
TLD +++ H K +A AFI
Sbjct: 1079 TLDRKLSWVKHTKLTLSKALGAFI 1102
>UniRef50_UPI0000D578A4 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 678
Score = 63.3 bits (147), Expect = 5e-09
Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSP--PTHLALFADDTTVYYSSRNKSLIAKKLQSAALAL 176
GVPQG +D P S T FADDT ++ S + ++ LQ +
Sbjct: 374 GVPQGSVLSPILYIFYSSDFPVSDLHQTKTRFFADDTALWTSRTTAASASRTLQPLLNQI 433
Query: 177 GQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGV 356
W RKWR+ INPTKSTA+LF+ ++T ITL + I +YLG+
Sbjct: 434 STWTRKWRVKINPTKSTAILFK-HPNLTRNKKFDPRDIT--ITLDNTPIDLVPSTRYLGI 490
Query: 357 T 359
T
Sbjct: 491 T 491
>UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=2; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 971
Score = 61.7 bits (143), Expect = 2e-08
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPP--THLALFADDTTVYYSSRNKSLIAKKLQSAALAL 176
GVPQG +DIP T LFADDT ++ + + LQ
Sbjct: 664 GVPQGSVLSPLLYLIYCHDIPIKSQIATKTILFADDTALWTGQKTSFKATQVLQECLDEF 723
Query: 177 GQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGV 356
+W KWRI NPTKS+A+LF+ N+ ++L++ IP + +V+YLG+
Sbjct: 724 QKWASKWRIKPNPTKSSAILFR-NGHQCQSWKFQTRNI--HLSLWNIQIPLSNEVRYLGI 780
Query: 357 TL----DASMTFRPHIKSVRDRAAFI 422
+ + S ++ VR RA I
Sbjct: 781 SFHKYGNFSSDLNATLRKVRQRAGII 806
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 60.1 bits (139), Expect = 5e-08
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 8/144 (5%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQ 158
GVPQG D+P H LA +ADD + YSS + A+ LQ
Sbjct: 640 GVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQ 699
Query: 159 SAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARK 338
L W ++W + +NP K+ F +T PI L + +
Sbjct: 700 EYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSP---------VTAPIELEGVILDQPSQ 750
Query: 339 VKYLGVTLDASMTFRPHIKSVRDR 410
KYLG+TLD +TF PH+K+ R
Sbjct: 751 AKYLGITLDKRLTFGPHLKATTRR 774
>UniRef50_Q4EC81 Cluster: Pol protein; n=2; Wolbachia endosymbiont
of Drosophila ananassae|Rep: Pol protein - Wolbachia
endosymbiont of Drosophila ananassae
Length = 242
Score = 55.6 bits (128), Expect = 1e-06
Identities = 38/103 (36%), Positives = 46/103 (44%)
Frame = +3
Query: 84 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXX 263
LA +ADDT V S + AK LQ+ + +W KWR+ N K V F
Sbjct: 120 LATYADDTAVLMSHKQPKEHAKHLQAYLNVISEWANKWRMTFNVKKCAHVSF------FS 173
Query: 264 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHI 392
N T + L Q IP A K KYLGVTLD + HI
Sbjct: 174 GQNMTQTNQT-KLLLNGQIIPHANKYKYLGVTLDRKINMSLHI 215
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 55.2 bits (127), Expect = 1e-06
Identities = 40/132 (30%), Positives = 53/132 (40%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG D P + FADDT + S+ L ++ +
Sbjct: 635 GVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVER 694
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W WRI IN K V F PP+ L + IP A +V YLGV L
Sbjct: 695 WLADWRISINVQKCKQVTF-----------TLNKQTCPPLVLNNICIPQADEVTYLGVHL 743
Query: 363 DASMTFRPHIKS 398
D +T+R HI++
Sbjct: 744 DRRLTWRKHIEA 755
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 457 SKMSLRNKVTLYKTCIRPVMTYASXXXAHAXRTHID 564
S +SL K LY + ++P+ TY S +A R++ID
Sbjct: 775 SPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNID 810
>UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1060
Score = 53.2 bits (122), Expect = 6e-06
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSR---NKSLIAKKLQSAALA 173
GVPQG NDI + + + LFADD+T+Y R + ++ LQ
Sbjct: 752 GVPQGSVIGPTLFLLYINDIQDNIQSTMRLFADDSTLYREIRCPEDHQILKDDLQQ---- 807
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQS---IPWARKVK 344
L +W W +D N K A+L TP I + S IP ++ K
Sbjct: 808 LSRWSSNWMMDFN-VKKCAIL------------TITRKRTPSIREYHLSNGLIPRVKEYK 854
Query: 345 YLGVTLDASMTFRPHIKSVRDRAAFILGRL 434
YLGVT+ A + + H +++R +A+ LG L
Sbjct: 855 YLGVTVAADLRWNKHCQTIRHKASRTLGLL 884
>UniRef50_UPI0000587485 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 766
Score = 53.2 bits (122), Expect = 6e-06
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPR--SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALAL 176
GVPQG ND+P SP T + LFADD VY S +++ A+ LQ +L
Sbjct: 479 GVPQGSVIGPMLFLLFINDLPEYLSPDTTVRLFADDCLVYRSIASEADSAQ-LQEDINSL 537
Query: 177 GQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGV 356
QW W ++ NP K + + P + Q++ A KYLG+
Sbjct: 538 EQWEADWLMEFNPKKCQVLHVSNKRKP----------IIKPYIIHGQTLEHADTAKYLGI 587
Query: 357 TLDASMTFRPHIKSVRDRA 413
L +++ H+ V +A
Sbjct: 588 HLHKKLSWNYHMDQVTRKA 606
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 52.8 bits (121), Expect = 8e-06
Identities = 43/159 (27%), Positives = 62/159 (38%), Gaps = 8/159 (5%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQ 158
GVPQG +D+P P +A +ADDT V S++ LQ
Sbjct: 641 GVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQ 700
Query: 159 SAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARK 338
A QW W + IN K V F P ++L + I +
Sbjct: 701 EYLDAFQQWAENWNVRINAEKCANVTF-----------ANRTGSCPGVSLNGRLIRHHQA 749
Query: 339 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 455
KYLG+TLD +TF HI +++ + R+ +I R
Sbjct: 750 YKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPR 788
>UniRef50_UPI0000E46F21 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 561
Score = 52.4 bits (120), Expect = 1e-05
Identities = 39/144 (27%), Positives = 61/144 (42%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG N +P + + +ALFADDT VY + + + KLQ AL +
Sbjct: 280 GIPQGSVLGPILFLIYINALPLAVNSSVALFADDTKVYGPVKGAADV-NKLQYDIDALME 338
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W ++W++ N +K + + N + + K LGVT
Sbjct: 339 WSKRWQLPFNESKCKVIHYGYKNPRESYSVNKETN---------SMLKDVTEEKDLGVTF 389
Query: 363 DASMTFRPHIKSVRDRAAFILGRL 434
D S+ F H+ + +A ILG L
Sbjct: 390 DPSLKFSLHVGKITAKANSILGLL 413
>UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6;
Bilateria|Rep: Endonuclease/reverse transcriptase -
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Length = 1045
Score = 49.6 bits (113), Expect = 7e-05
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 3/140 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTT---VYYSSRNKSLIAKKLQSAALA 173
GVPQG ND+P + LFADDT V +R++ L+ + L AL
Sbjct: 747 GVPQGSVLGPSLFLLFINDLPAGLSSTARLFADDTACQKVIKVARDQDLVQEDLHKLAL- 805
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
W +KW + +P K V + L + +VKYLG
Sbjct: 806 ---WEQKWIMSFHPEKCITV----------HMSRSRKQMEREYELHGHKLKACDQVKYLG 852
Query: 354 VTLDASMTFRPHIKSVRDRA 413
+TL + + PH+ ++ ++A
Sbjct: 853 ITLTRDLKWSPHVTNITNKA 872
>UniRef50_UPI0000E46F02 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 642
Score = 49.2 bits (112), Expect = 9e-05
Identities = 36/142 (25%), Positives = 60/142 (42%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG ND+P + H +FADDT VY + + K +Q +L
Sbjct: 336 GIPQGSVLGPILFITYINDLPDNLKGHAEMFADDTKVYTHIKTQE-DRKTMQQDLDSLCD 394
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W KW++ N K + + ++ T + + ++ K LGVT
Sbjct: 395 WAEKWQLKFNVGKCGVMHY------GNQDETRPYSMRDGTTRANMEV--RKEEKDLGVTF 446
Query: 363 DASMTFRPHIKSVRDRAAFILG 428
D ++ F H+ V ++A I+G
Sbjct: 447 DPTLKFSKHVGKVANKANRIVG 468
>UniRef50_UPI0000E47DE5 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 862
Score = 48.8 bits (111), Expect = 1e-04
Identities = 34/144 (23%), Positives = 57/144 (39%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG ND+P + +H+ LFADDT +Y + +K+ + LQ +
Sbjct: 545 GIPQGSVLGPTLFNVFINDLPSTVDSHMKLFADDTKLYRTVDSKA-DSDLLQMDVNTVTN 603
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W W++ N +K + + N+ S+P + + LGV
Sbjct: 604 WSNVWQLPFNESKCKVLHYGRKNQGFDYTLAAGTNIF--------SVPSGNEERDLGVLF 655
Query: 363 DASMTFRPHIKSVRDRAAFILGRL 434
++F H RA LG +
Sbjct: 656 QQDLSFSTHAADAAKRANIKLGMI 679
>UniRef50_UPI0000E467A7 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 612
Score = 48.8 bits (111), Expect = 1e-04
Identities = 34/144 (23%), Positives = 57/144 (39%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG ND+P + +H+ LFADDT +Y + +K+ + LQ +
Sbjct: 319 GIPQGSVLGPTLFNVFINDLPSTVDSHMKLFADDTKLYRTVDSKA-DSDLLQMDVNTVTN 377
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W W++ N +K + + N+ S+P + + LGV
Sbjct: 378 WSNVWQLPFNESKCKVLHYGRKNQGFDYTLAAGTNIF--------SVPSGNEERDLGVLF 429
Query: 363 DASMTFRPHIKSVRDRAAFILGRL 434
++F H RA LG +
Sbjct: 430 QQDLSFSTHAADAAKRANIKLGMI 453
>UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Rep:
Pol protein - Drosophila virilis (Fruit fly)
Length = 891
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/103 (29%), Positives = 44/103 (42%)
Frame = +3
Query: 87 ALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXX 266
A +ADDT S+ N + LQ +W W I IN KS ++F
Sbjct: 769 ATYADDTAFLCSAMNAVVATTILQGHMHRFVKWANNWNIQINDNKSVHIIF-----TLRR 823
Query: 267 XXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIK 395
+LT +T+ + IP VKYLG+ LD + + H +
Sbjct: 824 QIANAGSLTTQLTINNNIIPAKSYVKYLGLNLDKKLNWARHAR 866
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 47.6 bits (108), Expect = 3e-04
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPR--SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALAL 176
GVPQG N I SP +L+ DD + +N + + +KLQ +
Sbjct: 630 GVPQGSILSVTLFNIKINSIINALSPGIECSLYVDDFVILTYGKNMNTLERKLQLCLNKI 689
Query: 177 GQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGV 356
W + +K+ ++ F + P + + + IP + K+LG+
Sbjct: 690 QGWANYNGFKFSDSKTVSMHF---------CNLRGLHPDPELFIHKKKIPVVKTTKFLGL 740
Query: 357 TLDASMTFRPHIKSVRDR 410
TLD+ F PHIK ++ +
Sbjct: 741 TLDSKFNFLPHIKELKKK 758
>UniRef50_UPI0000E4A5CE Cluster: PREDICTED: similar to
Gamma-glutamyltranspeptidase 1 precursor
(Gamma-glutamyltransferase 1) (GGT 1) (CD224 antigen);
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Gamma-glutamyltranspeptidase 1 precursor
(Gamma-glutamyltransferase 1) (GGT 1) (CD224 antigen) -
Strongylocentrotus purpuratus
Length = 625
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG ND+P + + +ALF DDT VY + ++ KLQ AL +
Sbjct: 472 GIPQGSVLGPILFLIYINDLPLAVNSSVALFVDDTKVYGPVKG-AVDVNKLQYDIDALME 530
Query: 183 WFRKWRIDINPTKSTAV 233
W ++W++ N +K +
Sbjct: 531 WSKRWQLPFNESKCKVI 547
>UniRef50_UPI0000E483B1 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 483
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG ND+P + + +ALF DDT VY + ++ KLQ AL +
Sbjct: 298 GIPQGSVLGPILFLIYINDLPLAVNSSVALFVDDTKVYGPVKG-AVDVNKLQYDIDALME 356
Query: 183 WFRKWRIDINPTKSTAV 233
W ++W++ N +K +
Sbjct: 357 WSKRWQLPFNESKCKVI 373
>UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1092
Score = 46.8 bits (106), Expect = 5e-04
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 8/138 (5%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQ 158
GVPQG +D+P R PT L+ +ADDT V S + + +
Sbjct: 697 GVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNE 756
Query: 159 SAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARK 338
+ W KW I +N K+ V+F + + + Q+I K
Sbjct: 757 NYLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTN--------SMNVKIKGQTIKKESK 808
Query: 339 VKYLGVTLDASMTFRPHI 392
YLGVTLD+ +T H+
Sbjct: 809 QSYLGVTLDSKLTLSSHV 826
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 457 SKMSLRNKVTLYKTCIRPVMTYASXXXAH 543
SKMSLR+K+ LYKTCIRPV+TY+ AH
Sbjct: 14 SKMSLRHKLILYKTCIRPVITYSCPVFAH 42
>UniRef50_UPI00015B46F3 Cluster: PREDICTED: similar to reverse
transcriptase-like protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase-like protein - Nasonia vitripennis
Length = 745
Score = 45.6 bits (103), Expect = 0.001
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKS--LIAKKLQSAALAL 176
GVPQG + S HL L+ADD +Y L +L AA A+
Sbjct: 284 GVPQGSVLFSLYINNIAETLDTSHIKHL-LYADDLQIYTQVETSEFDLGIARLADAARAV 342
Query: 177 GQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGV 356
W + +N K+ A+ F + +P++ VK LGV
Sbjct: 343 SAWAGASGLHLNVLKTKAIFFGSDYNVNILNGLGLPGMEMGTGAL---VPFSNTVKNLGV 399
Query: 357 TLDASMTFRPHIKSVRDRA 413
+D+ ++++PH++ + RA
Sbjct: 400 VMDSKLSWKPHVECITKRA 418
>UniRef50_Q8UUM3 Cluster: ReO_6 protein; n=3; Percomorpha|Rep: ReO_6
protein - Oryzias latipes (Medaka fish) (Japanese
ricefish)
Length = 971
Score = 45.6 bits (103), Expect = 0.001
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPT-HLALFADDTTVYYSSRNKSLIAKKLQSAALALG 179
G PQG ND P+ L FADDTTV R+ A + + L L
Sbjct: 716 GAPQGCVLSPLLFSLYTNDCRSGAPSVKLFKFADDTTVIGLIRDGDETAYRGEVERLVL- 774
Query: 180 QWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVT 359
W + +++NP K+ + + PP+T+ + ++P ++LG T
Sbjct: 775 -WSSQNHLELNPLKTVEMTVDFRRNP---------STPPPLTILNSTVPSTDSHRFLGST 824
Query: 360 LDASMTFRPHIKSVRDRAAFILGRLYPMICKRE*NVP 470
+ + + HI S+R +A RLY + ++ N+P
Sbjct: 825 ISRDLKWTAHIDSLRKKAQ---QRLYFLRQLKKFNLP 858
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1103
Score = 45.6 bits (103), Expect = 0.001
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Frame = +3
Query: 63 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVL 236
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 237 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 416
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 417 FILGRLYPMICK 452
+L +I K
Sbjct: 834 AAYKKLEWLIGK 845
>UniRef50_UPI0000E477B8 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 467
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/144 (23%), Positives = 60/144 (41%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG NDI + + + LFADD+ +Y + ++LQ + Q
Sbjct: 167 GVPQGSVLGPMLFLLYVNDITTNVNSSMRLFADDSVIYRTICGPD-DQERLQEDLQKVFQ 225
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W W + N +K + ++ Q +P + KYLGVT+
Sbjct: 226 WAETWSMAFNISKCAHLSITLKRWPYLFN----------YSVNEQVLPQKKTYKYLGVTV 275
Query: 363 DASMTFRPHIKSVRDRAAFILGRL 434
+ + H++++R +A+ +G L
Sbjct: 276 RDDLRWNTHVEALRSKASRTMGIL 299
>UniRef50_UPI0000E4718F Cluster: PREDICTED: similar to
UDP-glucuronosyltransferase 2B22; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
UDP-glucuronosyltransferase 2B22 - Strongylocentrotus
purpuratus
Length = 863
Score = 44.0 bits (99), Expect = 0.004
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG ND P P T L+ADD + +++ + + L A L
Sbjct: 210 GLPQGSVLAPLLFNVYTNDQPIHPNTRSFLYADDLCIATQNQSFVKLEESLSDALAGLIP 269
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
++ + NP K+ F N I+ + + + YLGVT+
Sbjct: 270 YYATNHLRANPDKTQISAFH--------LKNRDANHQLRISWYGKRLKHTPNPVYLGVTI 321
Query: 363 DASMTFRPHIK--SVRDRAA 416
D S+T++ HI S+ DR A
Sbjct: 322 DRSLTYKNHINHDSMDDRMA 341
>UniRef50_Q4QQE9 Cluster: Endonuclease-reverse transcriptase; n=1;
Schistosoma mansoni|Rep: Endonuclease-reverse
transcriptase - Schistosoma mansoni (Blood fluke)
Length = 940
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG ND+PR + + L+ADD ++ + ++K + +LQ+ L +
Sbjct: 643 GVPQGTVLGPVLFLLYVNDLPRLLSSSVLLYADDVKIWRAIQSKG-DSLELQNDLERLSE 701
Query: 183 WFRKWRIDINPTK 221
W + W++ IN +K
Sbjct: 702 WSQTWQLPINTSK 714
>UniRef50_UPI0000E46F82 Cluster: PREDICTED: similar to
ENSANGP00000027929; n=10; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000027929
- Strongylocentrotus purpuratus
Length = 880
Score = 43.6 bits (98), Expect = 0.005
Identities = 32/134 (23%), Positives = 54/134 (40%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG ND P P T L+ADD + +++ + + L A L
Sbjct: 544 GLPQGSVLAPLLFNVYTNDQPIHPNTRSFLYADDLCIATQNQSFVKLEESLSDALAGLIP 603
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
++ + NP K+ F N I+ + + + YLG+TL
Sbjct: 604 YYATNHLRANPDKTQISAFH--------LKNRDANHQLRISWYGKRLKHTPNPVYLGITL 655
Query: 363 DASMTFRPHIKSVR 404
D S+T++ HI + +
Sbjct: 656 DRSLTYKNHIANTK 669
>UniRef50_UPI000058923D Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 289
Score = 43.6 bits (98), Expect = 0.005
Identities = 38/147 (25%), Positives = 55/147 (37%), Gaps = 3/147 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQ ND+P + + LFADD +Y + + + + LQ L
Sbjct: 44 GVPQETVLGPLMFFLFINDLPDNLRSTARLFADDCIIYTNGKFREEL-DTLQEDPHQLEA 102
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPP---ITLFSQSIPWARKVKYLG 353
W KW + NP K T + N PP T Q + YLG
Sbjct: 103 WQSKWAMSSNPAKFTVMKIS-------------NNRDPPNRNYTFCGQPLQEVSSYPYLG 149
Query: 354 VTLDASMTFRPHIKSVRDRAAFILGRL 434
V +D + + H + +A +LG L
Sbjct: 150 VEIDNKLRWDTHFTKLTSKANKVLGFL 176
>UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Rep:
Pol-like protein - Aedes aegypti (Yellowfever mosquito)
Length = 1208
Score = 43.2 bits (97), Expect = 0.006
Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALF--ADDTTVYYSSRNKSLIAKKLQSAALAL 176
GVPQG N+I + P + +F ADD + R I +KLQ+A A+
Sbjct: 642 GVPQGSVIAVTIFLVLMNNIFEALPKEIYIFVYADDILLVVIGRTLKFIRRKLQAAVSAV 701
Query: 177 GQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGV 356
+W D++ KS L P+ + IP + + LGV
Sbjct: 702 ARWAANSGFDLSAEKSV---------ISHVCRSRHRVLQTPVMVNGCPIPCRKTMVILGV 752
Query: 357 TLDASMTFRPHIKSVR 404
LD + F H+ +++
Sbjct: 753 QLDRELRFDAHLNAIK 768
>UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1;
Aedes aegypti|Rep: Lian-Aa1 retrotransposon protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1189
Score = 43.2 bits (97), Expect = 0.006
Identities = 30/113 (26%), Positives = 48/113 (42%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
FAD+ S + +QSA + W R++ + +NP K++ VLF
Sbjct: 645 FADEYLALIVGMCISTLFDLMQSALQVVESWCRQYGLSVNPNKTSIVLFTERRNRDGIR- 703
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGR 431
P+ LF I +VKY+GV LD+ + + HI +A G+
Sbjct: 704 --------PLRLFGTEINVTDQVKYVGVILDSKLLWTAHIDFRVKKACMAFGQ 748
>UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 (Retrovirus-related
Pol polyprotein from type I retrotransposable element
R1) [Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease]; n=1; Bradysia coprophila|Rep:
Retrovirus-related Pol polyprotein from type-1
retrotransposable element R1 (Retrovirus-related Pol
polyprotein from type I retrotransposable element R1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Sciara coprophila (Fungus gnat)
Length = 1004
Score = 43.2 bits (97), Expect = 0.006
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +3
Query: 84 LALFADDTTVYYSSRNKSLIAKKLQSAALAL-GQWFRKWRIDINPTKSTAVLFQXXXXXX 260
+ FADD T+ + ++S + ++L + L L +W ++ + ++ K+T +L +
Sbjct: 634 IVAFADDGTIVIGANSRSAL-EELGTRCLQLCHEWGKRVCVPVSAGKTTCILMKGHLSA- 691
Query: 261 XXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 434
N P I L SI + +VK+LG+ + M FRPH +R + ++G L
Sbjct: 692 --------NRPPCIRLNGTSISYKSEVKHLGIFVAERMNFRPHFVYLRGKILGLVGCL 741
>UniRef50_UPI0000E488CB Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 732
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG ND+ + + LFADDT +Y N+ + + LQ+ L
Sbjct: 495 GIPQGSILGPILFVIFINDLHNEVTSKILLFADDTKLYREVGNQ-VDSSSLQTDLTNLTL 553
Query: 183 WFRKWRIDINPTKSTAV 233
W KW++ N +K +
Sbjct: 554 WAEKWQLPFNQSKCAVI 570
>UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 492
Score = 42.3 bits (95), Expect = 0.011
Identities = 28/107 (26%), Positives = 50/107 (46%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
+ADD + ++ ++A +Q A + +W K ++ +NP K + +L
Sbjct: 56 YADDIVILIRGDDEDVLAGLMQFALGLVEKWCNKIKLGVNPNKVSVMLCTNKYKTKPMEG 115
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 413
+ P+ L ++VKYLGVTLDA + + HIK ++A
Sbjct: 116 LQLHGV--PLKL-------VKEVKYLGVTLDAKLNWGKHIKDKCEKA 153
>UniRef50_UPI00015B4665 Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 1153
Score = 42.3 bits (95), Expect = 0.011
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRS---PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
G PQG N I ++ + + DD V + ++ + I ++SA
Sbjct: 616 GTPQGGVISPLLWLIVINKILKTFEDKKIKIIAYVDDVVVLITGKDLTTIRDIMESALGK 675
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ +W + + +NP+K+ VLF TPP + + I +++ KYLG
Sbjct: 676 ISKWAGQNGLGVNPSKTELVLF--------TRKYKIPKFTPP-RIGGREITLSKEAKYLG 726
Query: 354 VTLDASMTFRPHIK 395
+ LD+ +T++ +++
Sbjct: 727 IILDSKLTWKRNVE 740
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 41.9 bits (94), Expect = 0.014
Identities = 25/111 (22%), Positives = 50/111 (45%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
+ADD + + A + A A+ QW + R+++ +K+ +
Sbjct: 733 YADDLVLLVPGTTPTTAAAAAEEAVAAVKQWLLEHRLELAHSKTEMTVISSLKQPPEEVF 792
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 425
IT ++P++R +KYLGV + A +++ PH+K + +A I+
Sbjct: 793 ---------ITFGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>UniRef50_Q4QQE2 Cluster: Endonuclease-reverse transcriptase; n=3;
Bilateria|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 945
Score = 41.9 bits (94), Expect = 0.014
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVY---YSSRNKSLIAKKLQSAALA 173
GVPQG N++P + + LFADD ++ YS ++ ++ + L S
Sbjct: 647 GVPQGTILGPLLFLLYINELPAIAKSSVLLFADDIKIWRPIYSMSDRIVLQEDLNS---- 702
Query: 174 LGQWFRKWRIDINPTKSTAV 233
L W W +++NP KS +
Sbjct: 703 LVAWMNGWSLEVNPNKSVVM 722
>UniRef50_UPI0000E493DE Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1186
Score = 41.5 bits (93), Expect = 0.019
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG NDIP T +FADDT +Y +K LQ AL
Sbjct: 794 GVPQGSILGPLLFLIFVNDIPDMVLTTAKMFADDTKIYRQITSKD-DCDILQRDLNALAA 852
Query: 183 WFRKWRIDINPTK 221
W + W ++ N K
Sbjct: 853 WSKLWLLEFNAEK 865
>UniRef50_UPI000069DFFE Cluster: UPI000069DFFE related cluster;
n=26; Xenopus tropicalis|Rep: UPI000069DFFE UniRef100
entry - Xenopus tropicalis
Length = 889
Score = 41.5 bits (93), Expect = 0.019
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +3
Query: 90 LFADDTTVY--YSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXX 263
L+ADDT +Y ++ N L+ + S A+ W + + +N +K+ VLF
Sbjct: 612 LYADDTQIYLTFNPSNPELLTH-VSSCLAAISTWMSQRYLKLNLSKTELVLFPLSNAHIV 670
Query: 264 XXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSV 401
N IT SQ+ W LGV LD++++F PHI+S+
Sbjct: 671 PEVSIQVN-NSTITPSSQA--WC-----LGVILDSALSFTPHIQSL 708
>UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 932
Score = 41.1 bits (92), Expect = 0.025
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
FADD V SSRN+ + + + +W + + K+ A L
Sbjct: 584 FADDLAVLVSSRNEEEMMVLVNQTLQKVAEWMEDTGLSVAAHKTEATLLTGRRRPREIK- 642
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSV---RDRAAFILGRLYP 440
+L + I +KYLGV LD + F PH++ V +R L RL P
Sbjct: 643 ---------FSLMGEDISPQTSIKYLGVRLDKELRFAPHVEEVAAKAERTMAALSRLMP 692
>UniRef50_Q86GH0 Cluster: Pol protein; n=1; Drosophila americana|Rep:
Pol protein - Drosophila americana (Fruit fly)
Length = 1517
Score = 41.1 bits (92), Expect = 0.025
Identities = 30/126 (23%), Positives = 53/126 (42%)
Frame = +3
Query: 57 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVL 236
D +P L+ FADDT V ++ + A +W ++W I +N +K+ V+
Sbjct: 796 DTTLTPSMLLSTFADDTVVMCAAPFPDSAVNRNDRYLQAFEKWTKRWCIQVNVSKTAHVM 855
Query: 237 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 416
F ++P L Q I + +YLGV LD + + H+ ++ R
Sbjct: 856 FTLRTTLRQSQTA----ISP--RLNGQEIANKSRHQYLGVQLDKKLNMKQHVTTLCARTG 909
Query: 417 FILGRL 434
+ +L
Sbjct: 910 ALCKKL 915
>UniRef50_P16425 Cluster: Putative 115 kDa protein in type-1
retrotransposable element R1DM; n=13; Drosophila|Rep:
Putative 115 kDa protein in type-1 retrotransposable
element R1DM - Drosophila melanogaster (Fruit fly)
Length = 1021
Score = 41.1 bits (92), Expect = 0.025
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 294 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 434
P + +++P+ R +YLG+T+ M F HI S+R R ++G L
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGAL 765
>UniRef50_UPI0000E47148 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 810
Score = 40.7 bits (91), Expect = 0.033
Identities = 36/142 (25%), Positives = 58/142 (40%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG NDI + + LFADD + + +K A+ LQ L +
Sbjct: 514 GVPQGTVLGPLMFLLYINDIGEDISSTIKLFADD-CLLFRKIDKDEDAQDLQKDLQKLHK 572
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W KW++ N K ++ + ++ SQS YLG+ +
Sbjct: 573 WAEKWQMLFNAKKCYSMRIHRKQKPIILNYTMGDEVLAAVS--SQS--------YLGMEI 622
Query: 363 DASMTFRPHIKSVRDRAAFILG 428
++++ HIK+V +A LG
Sbjct: 623 HEKLSWKHHIKAVAAKANRTLG 644
>UniRef50_UPI000058732A Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 242
Score = 40.7 bits (91), Expect = 0.033
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPR--SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALAL 176
GVPQG ND+P SP + LFADD +Y + + + A Q +L
Sbjct: 5 GVPQGSVIGPMLFLLFINDLPEYLSPNSTARLFADDCMLYSNIKTEE-DALLFQEDLDSL 63
Query: 177 GQWFRKWRIDINPTK 221
+W R W ++ NP K
Sbjct: 64 QRWERDWLMEFNPQK 78
>UniRef50_Q6IH44 Cluster: HDC03386; n=1; Drosophila
melanogaster|Rep: HDC03386 - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 40.7 bits (91), Expect = 0.033
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 294 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 455
PP+TL +I YLG+TLD +T+ PHI R +A L +L+ +I K+
Sbjct: 19 PPVTLDGDTITTTSTPNYLGLTLDRRLTWGPHINRKRIQANIRLKQLHWLIGKK 72
>UniRef50_UPI00015B48A6 Cluster: PREDICTED: similar to ORF2-encoded
protein; n=5; Nasonia vitripennis|Rep: PREDICTED: similar
to ORF2-encoded protein - Nasonia vitripennis
Length = 1146
Score = 40.3 bits (90), Expect = 0.044
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPR----SPPTHLALFADDTTVYYSSRNKSLI--AKKLQSA 164
GVPQG ND+ + HL +ADD +Y + + + +L A
Sbjct: 1003 GVPQGSVLGPLLFSLYVNDLQNILDGNAIKHL-FYADDLQIYLHTNKDNFLDGVARLAEA 1061
Query: 165 ALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVK 344
A + W + +N K+ ++ F + P + +P++ V
Sbjct: 1062 ARLVSNWAESSGLRLNSGKTKSIFFGSMKNVNDIKSWNMPGVPLPDGVI---VPFSETVV 1118
Query: 345 YLGVTLDASMTFRPHIKSVRDRA 413
LGV LD+ +T+RP + ++ ++
Sbjct: 1119 SLGVVLDSKLTWRPQVDAITKKS 1141
>UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein R11E3.3 - Caenorhabditis elegans
Length = 931
Score = 39.5 bits (88), Expect = 0.076
Identities = 30/130 (23%), Positives = 49/130 (37%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG D+P T L +ADD ++ + A+K+Q + +
Sbjct: 532 GVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAK 591
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
+ ++ + I+ KST +F P I IP K LG+TL
Sbjct: 592 YLKERGMSISAEKSTVTVFS--------CDPKEHKTKPDIYWMDDPIPVINAPKLLGITL 643
Query: 363 DASMTFRPHI 392
+ + H+
Sbjct: 644 NTMTGTKDHV 653
>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 1119
Score = 39.1 bits (87), Expect = 0.10
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAK--KLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXX 266
FADD ++Y N S+ K KL++ A + + R+ ++I P K V+F
Sbjct: 634 FADDISIYNKESNLSVEEKTRKLETEASRIVLFLRERGLEIAPDKCVLVIFHDSNYNYYK 693
Query: 267 XXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDR 410
I++ + S+ + VK+LG+ LD + ++ HI V D+
Sbjct: 694 DIQ--------ISINNISVGTSEHVKFLGMYLDRRLNWKKHISYVTDK 733
>UniRef50_UPI0000E47234 Cluster: PREDICTED: hypothetical protein;
n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 762
Score = 39.1 bits (87), Expect = 0.10
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSP-PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALG 179
G+PQG ND+P + +ALFADDT +Y + + I LQ L
Sbjct: 459 GIPQGSVLGPVLFLVYINDLPLDVRKSEVALFADDTKLYNTVSTPAQI-NDLQDDLNNLH 517
Query: 180 QWFRKWRIDINPTK 221
+W +W++ N K
Sbjct: 518 RWSERWQLPFNEDK 531
>UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=6; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1057
Score = 39.1 bits (87), Expect = 0.10
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 6/154 (3%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPR---SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG + + R L +ADD + ++ + ++ +
Sbjct: 538 GVPQGSVLGPILWNILYDGVLRLEIPKEATLVAYADDLALVVIEKDIENLMCTVEMTSKI 597
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+G+W ++ + + P K+ AVL N+ + + V+YLG
Sbjct: 598 IGRWMKENGLQLAPEKTEAVLLAGGRRPDKNIVFKVENV---------ELRPKQNVRYLG 648
Query: 354 VTLDASMTFRPHIKSVRDRA---AFILGRLYPMI 446
V ++ MTF H+ V +A A +LGRL P +
Sbjct: 649 VDINQRMTFTSHVMRVAAKAEKMAAMLGRLMPNV 682
>UniRef50_O46180 Cluster: Non-LTR retrotransposon reverse
transcriptase; n=2; Drosophila subobscura|Rep: Non-LTR
retrotransposon reverse transcriptase - Drosophila
subobscura (Fruit fly)
Length = 467
Score = 39.1 bits (87), Expect = 0.10
Identities = 26/111 (23%), Positives = 49/111 (44%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
+ADD + +S + + + + + L +W + + INP+K+ VLF
Sbjct: 302 YADDVAIIFSGKFPQTLCELMTAKLARLSEWTKSRGLGINPSKTELVLF--------TTK 353
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 425
+L PPI L + ++ YLG+ +D +++ IK +A L
Sbjct: 354 YKIPSLNPPI-LNGCRLSFSDSASYLGLVIDKKLSWNLSIKDRVKKATIAL 403
>UniRef50_UPI0000E4A76C Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 844
Score = 38.7 bits (86), Expect = 0.13
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG ND+P + + ++ADDT +S + K LQ+ +L
Sbjct: 558 GVPQGSVLGPTLFVLYINDLPEVLDSTVRIYADDTKA-FSCVSTPDQRKLLQADLCSLTD 616
Query: 183 WFRKWRIDINPTK 221
W KW++ N K
Sbjct: 617 WSSKWQLQFNARK 629
>UniRef50_UPI0000E4A3C4 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 424
Score = 38.7 bits (86), Expect = 0.13
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G PQG NDI + LFADD +Y + R+ + LQ+ L
Sbjct: 49 GTPQGTVLGPHLFLLHINDIDNGVKSTTRLFADDCLIYNTIRSPK-DEEILQTDLNTLVN 107
Query: 183 WFRKWRIDINPTKSTAV 233
W W + NP+K T +
Sbjct: 108 WANTWGMTFNPSKCTTM 124
>UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 776
Score = 38.7 bits (86), Expect = 0.13
Identities = 25/108 (23%), Positives = 44/108 (40%)
Frame = +3
Query: 69 SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXX 248
+P L ADD + +SR+ I + LQ+ L +W I + TK+ V+F
Sbjct: 325 APNCSLRQLADDGVISVASRDPVEIQQALQTTLDNLAEWSENLGIKFSATKTEMVVFSPF 384
Query: 249 XXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHI 392
+ + L+ + I +YLGV ++ + + HI
Sbjct: 385 SDTDKNREKGLYDPNIDVFLYGEKISITDNFRYLGVWFNSRLNWSTHI 432
>UniRef50_Q6II19 Cluster: HDC20041; n=1; Drosophila
melanogaster|Rep: HDC20041 - Drosophila melanogaster
(Fruit fly)
Length = 120
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 84 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAV 233
LA +ADDT + S + + + +Q A+ +W KW I IN TKS V
Sbjct: 19 LATYADDTAMLASHSSLQIASNGVQFRLPAIKRWTSKWNITINCTKSACV 68
>UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 474
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +3
Query: 285 NLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 434
N+ +TL +I + V+YLGV LD S+ ++ H+K V ++A+ +L L
Sbjct: 34 NMEQTVTLGDTTIRPSDGVRYLGVQLDRSLRWKQHLKHVEEKASSVLAAL 83
>UniRef50_UPI0000E45C58 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 607
Score = 38.3 bits (85), Expect = 0.18
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSR---NKSLIAKKLQSAALA 173
GVPQG NDI + + + LFADD+T+Y R + ++ LQ
Sbjct: 374 GVPQGSVIGPTLFLLYINDIQDNIQSTMRLFADDSTLYREIRCPEDHQILKDDLQQ---- 429
Query: 174 LGQWFRKWRIDINPTKSTAVL 236
L +W W +D N K A+L
Sbjct: 430 LSRWSSNWMMDFN-VKKCAIL 449
>UniRef50_UPI0000587F4D Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 405
Score = 37.9 bits (84), Expect = 0.23
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 6 VPQGXXXXXXXXXXXXNDIPR--SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALG 179
VPQG ND+P SP + LFADD +Y + + + A Q +L
Sbjct: 120 VPQGSVIGPMLFLRFINDLPEYLSPNSTGRLFADDCMLYSNIKTEE-DALLFQEDLDSLQ 178
Query: 180 QWFRKWRIDINPTK 221
+W R W +++NP K
Sbjct: 179 RWERDWLMELNPQK 192
>UniRef50_A7SVR1 Cluster: Predicted protein; n=14; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 222
Score = 37.9 bits (84), Expect = 0.23
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 54 NDIPRSPPTHLA-LFADDTTVY-YSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKST 227
N +P ++ A L+ADDT +Y Y S +K L + L LA+ +W ++ +N K+
Sbjct: 7 NSLPDVLESYCASLYADDTVIYCYGSSSKQL-SDNLNQDLLAVAKWMDDHKLTLNLEKTK 65
Query: 228 AVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIK 395
+L + +++ + ++ KYLGV + + +T+ H++
Sbjct: 66 CMLL-------GSNRKLESKIKLSVSISNYNVSNVSNFKYLGVFISSDLTWSEHVE 114
>UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to pol-like protein - Nasonia vitripennis
Length = 1050
Score = 37.5 bits (83), Expect = 0.31
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLAL--FADDTTVYYSSRNKSLIAKKLQSAALAL 176
GVPQG ++I + P +A FADD + S + L+ + ++
Sbjct: 652 GVPQGGVLSPLLYAIYVSNITNNLPKSVATLQFADDIALLCKRSPLSTTKRLLEKSINSI 711
Query: 177 GQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGV 356
++++ K+ + F I + +QSI + VK+LG+
Sbjct: 712 HDNLHSLGLELSAPKTILIHFNRRNIEPGKTE---------IKIKNQSIKSSATVKFLGI 762
Query: 357 TLDASMTFRPHIKSVRDRAA 416
T D + F+ H K+V+++A+
Sbjct: 763 TFDYRLNFKEHTKNVKNKAS 782
>UniRef50_UPI0000E49FFD Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 432
Score = 37.5 bits (83), Expect = 0.31
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG NDI + + + L ADD +Y +N S +KLQ L +
Sbjct: 38 GVPQGTVLGPLLFLLYINDITENLQSEIRLLADDYILYKVVKNLS-DCEKLQRDIHQLEK 96
Query: 183 WFRKWRIDINPTK 221
W +W++ N K
Sbjct: 97 WGDEWQMKFNAKK 109
>UniRef50_UPI0000E482C4 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 496
Score = 37.5 bits (83), Expect = 0.31
Identities = 28/125 (22%), Positives = 54/125 (43%)
Frame = +3
Query: 54 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAV 233
NDI + + LFADD +Y + + ++ LQ L W W++ N K + +
Sbjct: 205 NDIVDGISSKIRLFADDCLLYRPITDVT-DSQALQQDLNRLHSWANTWQMKFNTEKYSPI 263
Query: 234 LFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 413
F +T TL + ++YLG+T ++++++ H+ ++ A
Sbjct: 264 TFSLRRKA----------ITTTYTLGDTPLALVTDLRYLGLTFSSNLSWQGHMNNITSLA 313
Query: 414 AFILG 428
+LG
Sbjct: 314 NRMLG 318
>UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=2; Tribolium castaneum|Rep: PREDICTED: similar
to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1208
Score = 37.5 bits (83), Expect = 0.31
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 6/154 (3%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPR---SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG + + R L +ADD + ++ + ++ +
Sbjct: 607 GVPQGSVLGPTLWNILYDGVLRLEIPKEATLVAYADDLALVVIEKDIKNLMCTVEMTSKI 666
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+G+W ++ + + P K+ AVL N+ + + V+YLG
Sbjct: 667 IGRWMKENGLQLAPEKTEAVLLAGGRRPDKNVVFKVENV---------ELRPKQNVRYLG 717
Query: 354 VTLDASMTFRPHIKSVRDRA---AFILGRLYPMI 446
V ++ MTF H+ V +A +LGRL P +
Sbjct: 718 VDINQRMTFTSHVMRVAAKAEKMGAMLGRLMPNV 751
>UniRef50_Q4QQD9 Cluster: Reverse transcriptase; n=1; Schistosoma
mansoni|Rep: Reverse transcriptase - Schistosoma mansoni
(Blood fluke)
Length = 446
Score = 37.5 bits (83), Expect = 0.31
Identities = 32/130 (24%), Positives = 49/130 (37%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG +D+P S +ADD TV + SL ++ + +
Sbjct: 163 GVPQGAVLPPLLFSFFLHDLPSSTENTFVKYADDLTVCMPI-STSLHPIEMNEFLSRIER 221
Query: 183 WFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTL 362
W + +NP+K AV F N + I KVKYLGV
Sbjct: 222 WSVGNGLLLNPSKCQAVNFSLRHGQNLRSILGSHN---ACAIGDSLINTVSKVKYLGVLF 278
Query: 363 DASMTFRPHI 392
+ +++ H+
Sbjct: 279 SSDLSWSSHV 288
>UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse
transcriptase homolog, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase homolog, partial - Nasonia vitripennis
Length = 1316
Score = 36.3 bits (80), Expect = 0.71
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Frame = +3
Query: 78 THLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQ---XX 248
T+ FADD +Y + ++ + K L++ + ++ +W + IN K +L +
Sbjct: 870 TYSIAFADDLLLYCAGKSPDKLQKTLENLVNKVNSYYTQWHLKINAAKCETILIRLPISR 929
Query: 249 XXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPH--IKSVRDRAAF 419
++ S +P + V YLG+ +D + H I+ V+ R AF
Sbjct: 930 LSRTEKLHWRDFHIKVHQNNDSIPVPHNQHVIYLGIHIDQLLRLNNHLDIQLVKARKAF 988
>UniRef50_UPI00006CD1CA Cluster: hypothetical protein
TTHERM_00129610; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00129610 - Tetrahymena
thermophila SB210
Length = 835
Score = 36.3 bits (80), Expect = 0.71
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 315 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 437
+ IP + KYLG+ +D + T PH+K + R ++ LY
Sbjct: 614 EGIPIVNQYKYLGINIDGNGTIAPHLKFIEQRWKYLQKALY 654
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 36.3 bits (80), Expect = 0.71
Identities = 26/114 (22%), Positives = 47/114 (41%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
FADD + + I + +A + +W ++ P K+ A++
Sbjct: 1151 FADDVVLVFDGDTALEIENRANAALEHVQEWGINNKLKFAPQKTKAMVITRRLKYDI--- 1207
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 434
P + + IP + +K LGVT+D +TF H+ +V RA + +L
Sbjct: 1208 -------PRLNMGGTVIPMSEDIKILGVTVDNKLTFNAHVSNVCRRAIEVYKQL 1254
>UniRef50_UPI0000E47D32 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase, partial; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 913
Score = 35.9 bits (79), Expect = 0.94
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G PQG NDI + LFADD +Y ++ + + LQ A+ +
Sbjct: 666 GTPQGTVLGPHLFLLFINDIHDKVKSTTKLFADDCMLYSPIKSVNDV-DILQQDLDAMVE 724
Query: 183 WFRKWRIDINPTK 221
W +KW + NP K
Sbjct: 725 WSQKWGMKFNPKK 737
>UniRef50_O18520 Cluster: Pol; n=6; Bilateria|Rep: Pol - Schistosoma
mansoni (Blood fluke)
Length = 730
Score = 35.9 bits (79), Expect = 0.94
Identities = 24/77 (31%), Positives = 32/77 (41%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG ND+P+ + L LFADD ++ RN + I LQ L
Sbjct: 432 GVPQGSILGPLLFLIYINDLPQQVSSDLLLFADDVKLWREIRNHNDIL-VLQEDLTRLQS 490
Query: 183 WFRKWRIDINPTKSTAV 233
W + N +K V
Sbjct: 491 WADDNGLTFNTSKCKVV 507
>UniRef50_UPI00015B4793 Cluster: PREDICTED: similar to
Histone-lysine N-methyltransferase SUV420H2 (Suppressor
of variegation 4-20 homolog 2) (Suv4-20h2) (Su(var)4-20
homolog 2); n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to Histone-lysine N-methyltransferase SUV420H2
(Suppressor of variegation 4-20 homolog 2) (Suv4-20h2)
(Su(var)4-20 homolog 2) - Nasonia vitripennis
Length = 783
Score = 35.5 bits (78), Expect = 1.2
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Frame = +3
Query: 6 VPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIA--KKLQSAALALG 179
VPQG + S HL L+ DD +Y L L AA A+
Sbjct: 365 VPQGFVLFSLYINNIEETLDTSHIKHL-LYLDDLQIYTQVETSELDLGIACLAGAARAVS 423
Query: 180 QWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQS-IPWARKVKYLGV 356
W + +N K+ A+ F P + + + + +P++ VK LGV
Sbjct: 424 AWAGASGLHLNVLKTKAIFFGSGYNVNILNGLGL----PGVEMGAGALVPFSDTVKNLGV 479
Query: 357 TLDASMTFRPHIK 395
+D+ ++++PH++
Sbjct: 480 VMDSKLSWKPHVE 492
>UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 819
Score = 35.1 bits (77), Expect = 1.6
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAK--KLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXX 266
FADD +Y N S+ +K KL+ A + ++ ++ ++I P K V+F
Sbjct: 257 FADDICIYNKEINLSVESKINKLELDASRITEFLKERGLEIAPEKCVLVIFHNSRYNIYK 316
Query: 267 XXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDR 410
N+ + + S V +LG+ LD +T++ HI+ V D+
Sbjct: 317 ETKI--NINDKVIVASDY------VNFLGMYLDYRLTWKKHIEQVCDK 356
>UniRef50_UPI0000E48EFD Cluster: PREDICTED: similar to reverse
transcriptase-like protein, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
reverse transcriptase-like protein, partial -
Strongylocentrotus purpuratus
Length = 664
Score = 35.1 bits (77), Expect = 1.6
Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 5/149 (3%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTH---LALFADDTTVYYS--SRNKSLIAKKLQSAA 167
GVPQG + + H ++ADDT +Y S S +++ +KL
Sbjct: 407 GVPQGSVIGPLLFVCYTTPVQQIIHAHGLSCMMYADDTQLYISMNSDDRNRAIRKLDVCL 466
Query: 168 LALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKY 347
+ W + +N K T VL N P F + P A V+
Sbjct: 467 KEVRTWMGGNHLFLNDNK-TEVLH--------VSSHMKSNQELPPFCFGEIKP-AEAVRD 516
Query: 348 LGVTLDASMTFRPHIKSVRDRAAFILGRL 434
LGV +D ++ R HI V RA+F L R+
Sbjct: 517 LGVVIDKHLSLRRHINLVCRRASFALRRI 545
>UniRef50_Q91844 Cluster: X.laevis unknown protein; n=1; Xenopus
laevis|Rep: X.laevis unknown protein - Xenopus laevis
(African clawed frog)
Length = 118
Score = 35.1 bits (77), Expect = 1.6
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
GVPQG ND+ +++++FADDT + S N LQ L
Sbjct: 28 GVPQGSVLGPLLFNLFINDLGEGVVSNVSVFADDTKL-SSPINSIQDVASLQQDLDKLAI 86
Query: 183 WFRKWRID 206
W KW+ID
Sbjct: 87 WADKWQID 94
>UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1173
Score = 35.1 bits (77), Expect = 1.6
Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 3/140 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXN---DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG + D+ + FADD + +++ + A A
Sbjct: 645 GVPQGSILGPTLWNVMYDSVLDVQLPEGAEIIAFADDLLLLDPGITPEAASQRAEEAVSA 704
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ W +++ P K+ V N+ P+ + R ++YLG
Sbjct: 705 VNLWMENHCLELAPAKTELVTISSKRQG---------NINVPVVINGVERRTTRSIRYLG 755
Query: 354 VTLDASMTFRPHIKSVRDRA 413
V +D ++++ H++ +A
Sbjct: 756 VVIDNQLSWKSHVEYCTTKA 775
>UniRef50_UPI00015B461D Cluster: PREDICTED: similar to ORF2-encoded
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ORF2-encoded protein - Nasonia vitripennis
Length = 608
Score = 34.7 bits (76), Expect = 2.2
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLAL-FADDTTVYYSSRNKSLIAKKLQSAALALG 179
GVPQG NDI P+ L +ADDT + + + + LA+
Sbjct: 514 GVPQGTILGPLLFILYINDILHEIPSEAILSYADDTAIIATGDTWIKAQDNMNAFLLAIA 573
Query: 180 QWFRKWRIDINPTKSTAVLF 239
W ++ +N KS + F
Sbjct: 574 NWLAVNKLSLNVDKSVCMTF 593
>UniRef50_Q3LG56 Cluster: ORF2-encoded protein; n=4; Bilateria|Rep:
ORF2-encoded protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 1027
Score = 34.7 bits (76), Expect = 2.2
Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 4/145 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXX---NDIPRSPPTHLALFADDTTVYYSSR-NKSLIAKKLQSAAL 170
GVPQG DI R +ADDT +Y S++ +++ KL
Sbjct: 711 GVPQGSVLGPLLFTIYMLPMGDIIRRHGISFHCYADDTQLYISTKPDETSELSKLTECIK 770
Query: 171 ALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYL 350
+ W + +N K+ +L NL L + ++ +K L
Sbjct: 771 DIKDWMTNNFLLLNSDKTELLLI---GPKSCTQQISQLNLQ----LEGYKVSFSSTIKDL 823
Query: 351 GVTLDASMTFRPHIKSVRDRAAFIL 425
GV LD+++TF+ HI V A F L
Sbjct: 824 GVILDSNLTFKNHISHVTKTAFFHL 848
>UniRef50_UPI0000E47B3C Cluster: PREDICTED: similar to pol protein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to pol protein, partial -
Strongylocentrotus purpuratus
Length = 167
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQ 182
G+PQG DIP + T ++ADDT + + L +A +L +
Sbjct: 93 GLPQGGVLAPTLYNIYTADIPSTENTRNFIYADDTCITAQHSIFEAVELHLNTALASLSE 152
Query: 183 WFRKWRIDINPTKS 224
++R + NP+K+
Sbjct: 153 YYRANYLRANPSKT 166
>UniRef50_Q8SY74 Cluster: RH47344p; n=1; Drosophila
melanogaster|Rep: RH47344p - Drosophila melanogaster
(Fruit fly)
Length = 184
Score = 34.3 bits (75), Expect = 2.9
Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 3/140 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSP---PTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG + I R P + + FADD + + + A
Sbjct: 50 GVPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRA 109
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ W +++ P K+ AVL T + + + +R +KYL
Sbjct: 110 IEHWLSSMGLELAPEKTKAVLISSRKAVE----------TATVEVGGTLVSSSRAIKYLE 159
Query: 354 VTLDASMTFRPHIKSVRDRA 413
V +D ++FR H+ +A
Sbjct: 160 VMIDTRLSFREHLAYASSKA 179
>UniRef50_A7EJQ0 Cluster: Putative uncharacterized protein; n=2;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 785
Score = 34.3 bits (75), Expect = 2.9
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
+ADD ++++ S++ S AK LQ + +W +I P K +
Sbjct: 533 YADDISIFHCSKDFSTNAKVLQRRVRKIIKWGEDNKISFAPEKFELLHITRRHTTDNPPL 592
Query: 273 XXXXNL--TP-PITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 413
+L TP PI +++ P R +LGV D ++F H+K +A
Sbjct: 593 VVNRDLVITPVPIATTAKTTPTMR---WLGVYFDRRLSFLQHVKERTTKA 639
>UniRef50_UPI0000E45C95 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 837
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKK 152
GVPQG NDI + + + LFADD+T+Y R + L+ ++
Sbjct: 691 GVPQGSVIGPTLFLLYINDIQDNIQSTMRLFADDSTLYQQRRVQMLLTEE 740
>UniRef50_Q9BKT2 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 390
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2
Query: 61 ISLTNKLNRRGERTEPCGTP 2
ISLTN GERT+PCGTP
Sbjct: 50 ISLTNMPKSTGERTDPCGTP 69
>UniRef50_Q00068 Cluster: Reverse transcriptase; n=2; Ascobolus
immersus|Rep: Reverse transcriptase - Ascobolus immersus
Length = 746
Score = 33.9 bits (74), Expect = 3.8
Identities = 34/138 (24%), Positives = 61/138 (44%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
+ DD + + ++ A LQ AA+ +W R I + +KS + F
Sbjct: 317 YIDDVAIMLTGKSTVKNAATLQKAAVIAFEWARGNAIAFDDSKSELIHFANTNKVPTCP- 375
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICK 452
+ P + +P V++LG+ LD ++FRPH+++ R AA GR + +
Sbjct: 376 -----MVLPNGTELRPLP---SVRWLGILLDRKLSFRPHVEN-RIAAA---GRALSSLLR 423
Query: 453 RE*NVPSEQGDTLQNLHK 506
+E+G TL N+ +
Sbjct: 424 LS---TTEKGLTLSNMRQ 438
>UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1022
Score = 33.5 bits (73), Expect = 5.0
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 3/154 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDI---PRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG N++ L FADD + + ++++
Sbjct: 609 GVPQGSVLGPTLWNLMYNEVLGLTLYDGASLIGFADDIVLVAVGSRIDDLENTIETSINI 668
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ QW + +N +K+ +L I + +I +R +KYLG
Sbjct: 669 IRQWMESVELQLNISKTEYILVSSHRSRQESQ----------IIVEGHTIRSSRHLKYLG 718
Query: 354 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 455
+ +D + + HIK V +RA L M+ R
Sbjct: 719 IMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNR 752
>UniRef50_Q4F8Q2 Cluster: Reverse transcriptase; n=1; Aedes
aegypti|Rep: Reverse transcriptase - Aedes aegypti
(Yellowfever mosquito)
Length = 725
Score = 33.5 bits (73), Expect = 5.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPP-THLALFADDTTVYYSSRNKSL--IAKKLQSAALA 173
GVPQG ND+P L LFADD +Y KS+ I + + A
Sbjct: 429 GVPQGSVLGPILFSLYINDLPNVVKYCSLHLFADDVQLYLDCTKKSIEEITRLVNFDLEA 488
Query: 174 LGQWFRKWRIDINPTKSTAVL 236
+ W + + +N TK+ ++
Sbjct: 489 IRLWSLENTLKLNATKTYGIM 509
>UniRef50_A0ND98 Cluster: ENSANGP00000028649; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028649 - Anopheles gambiae
str. PEST
Length = 158
Score = 33.5 bits (73), Expect = 5.0
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3
Query: 339 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMIC 449
VK LGV LD +TF HI SV ++A LG L + C
Sbjct: 51 VKDLGVLLDRGLTFSHHIDSVVNQARKTLGLLKKIAC 87
>UniRef50_UPI00015B6048 Cluster: PREDICTED: similar to
ENSANGP00000012343; n=2; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000012343 - Nasonia
vitripennis
Length = 804
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 333 RKVKYLGVTLDASMTFRPHIKSVRDRA 413
++VKYLGVTLDA + + HIK ++A
Sbjct: 189 KEVKYLGVTLDARLNWGKHIKDKCEKA 215
>UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1448
Score = 32.7 bits (71), Expect = 8.8
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 288 LTPPITLFSQSIPWAR----KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMIC 449
L PP+ LF QSI A+ ++ Y G+ +D + RP ++ R +AF G ++ +IC
Sbjct: 1242 LKPPVLLFVQSIERAKDLFHELVYDGLHVDVIHSERPKLQRERVISAFKRGDIWVLIC 1299
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,834,550
Number of Sequences: 1657284
Number of extensions: 14823523
Number of successful extensions: 33603
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 32087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33556
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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