Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2197
(692 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 47 5e-07
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 44 6e-06
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 42 1e-05
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 42 1e-05
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 42 2e-05
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 40 7e-05
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 38 3e-04
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 37 5e-04
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 35 0.002
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 33 0.006
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 31 0.046
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 30 0.060
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 29 0.14
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 28 0.32
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 27 0.74
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 1.7
Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein... 25 3.0
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 25 3.0
AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein p... 24 5.2
AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein p... 24 5.2
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 6.9
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 9.1
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 23 9.1
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 47.2 bits (107), Expect = 5e-07
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSP-PTHLAL--FADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG + + R P P + +ADD V R A ++A A
Sbjct: 644 GVPQGSILGPTLWNVMYDGVLRIPLPDEAKVIGYADDLVVLAPGRTPEESAAVAEAAVSA 703
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ QW ++ +++ P K+ + I + ++P++R +K+LG
Sbjct: 704 VDQWMQQHHLELAPAKTEMTIISSLKHPPSHIS---------IDVRGTAVPYSRSIKHLG 754
Query: 354 VTLDASMTFRPHIKSVRDRAAFI---LGRLYP 440
V + +++ PH+ +V RA I +GRL P
Sbjct: 755 VLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMP 786
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 43.6 bits (98), Expect = 6e-06
Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXN---DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG + DI P + +ADD + + + A ++
Sbjct: 625 GVPQGSILGPTLWNTMYDGVLDIALPPDAEILGYADDLVLLVPGTTPDNVKAAAEEAIIS 684
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ +W + +++ P K+ V+ +T + + + +R ++YLG
Sbjct: 685 VMEWMARHHLELAPAKTEMVVISSTKAPT--------RIT--VRVGDVDVTSSRSIRYLG 734
Query: 354 VTLDASMTFRPHIKSVRDRAAFI 422
VTL +++ PH+K V +RA I
Sbjct: 735 VTLQDKLSWLPHVKEVTERAGKI 757
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 42.3 bits (95), Expect = 1e-05
Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXN---DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG + D+P P + +ADD + + + + + A
Sbjct: 685 GVPQGSILGPTLWNIMYDGVLDVPLPPDVEVIGYADDLALLVPATTTDEVRARAEEAVDQ 744
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLF---SQSIPWARKVK 344
+ +W ++ +++ P K+ AVL TPP F + +R ++
Sbjct: 745 VQRWMQQHGLELAPAKTEAVLIS-------------SKKTPPQVTFRVGDVEVQSSRSIR 791
Query: 345 YLGVTLDASMTFRPHIKSVRDRAAFIL 425
YLGV L + +R H+ V ++A+ ++
Sbjct: 792 YLGVQLQDHLKWRDHVTKVSEKASRVV 818
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 42.3 bits (95), Expect = 1e-05
Identities = 28/118 (23%), Positives = 55/118 (46%)
Frame = +3
Query: 72 PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXX 251
P L +ADD + + A + A A+ +W R+ +++ K+ +
Sbjct: 665 PGAELIGYADDLVLLAPGTTPAAAAVVAEEAVSAVDRWLREHHLELAHAKTEMTVISSLQ 724
Query: 252 XXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 425
++T IT+ +P++R +KYLGV L ++++ PH+K+V +A I+
Sbjct: 725 QPPE-------DIT--ITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 41.9 bits (94), Expect = 2e-05
Identities = 25/111 (22%), Positives = 50/111 (45%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
+ADD + + A + A A+ QW + R+++ +K+ +
Sbjct: 733 YADDLVLLVPGTTPTTAAAAAEEAVAAVKQWLLEHRLELAHSKTEMTVISSLKQPPEEVF 792
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 425
IT ++P++R +KYLGV + A +++ PH+K + +A I+
Sbjct: 793 ---------ITFGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 39.9 bits (89), Expect = 7e-05
Identities = 25/114 (21%), Positives = 50/114 (43%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
FADD + + A + A A+ W + ++ + P K+ ++
Sbjct: 667 FADDLAILAAGTIPEHAAAIAEEAVAAVNNWMVQHKLSLAPEKTELLMISSKRSGYR--- 723
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 434
N+ P+ + + R ++YLGV L +++RPH++ V D+A ++ L
Sbjct: 724 ----NI--PVNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRAL 771
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 37.9 bits (84), Expect = 3e-04
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 1/143 (0%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRS-PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALG 179
GVPQG ND+ + PP ++LFADD + ++ N + LQ
Sbjct: 742 GVPQGSNIGPLLFILFINDVTLALPPDSISLFADDAKI-FAPINNTGDCTFLQDCIEIFC 800
Query: 180 QWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVT 359
W ++ + I K V F +T + ++ K LGV
Sbjct: 801 SWCKRNGLTICIEKCYCVSFSRCRSP----------VTGTYFMDGTAVNRQNHAKDLGVL 850
Query: 360 LDASMTFRPHIKSVRDRAAFILG 428
LD+S+ F+ HI V R +LG
Sbjct: 851 LDSSLNFKQHIDDVVARGNQLLG 873
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 37.1 bits (82), Expect = 5e-04
Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 3/140 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXN---DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG + D+ + +ADD + + + + + A +
Sbjct: 692 GVPQGSILGPTLWNTMYDGVLDVALPQDCEMVAYADDLVLLIPGIDVNAVKAAAEEAVAS 751
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ W + + I P K+ VL I + + +R ++YLG
Sbjct: 752 VSHWMAQHHLQIAPEKTECVLISSTKNPTQVT----------IRVGDVEVTSSRTMRYLG 801
Query: 354 VTLDASMTFRPHIKSVRDRA 413
VTL +++ PH++ V RA
Sbjct: 802 VTLHDHLSWLPHVREVTTRA 821
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 35.1 bits (77), Expect = 0.002
Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 3/140 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXN---DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG + D+ + FADD + +++ + A A
Sbjct: 645 GVPQGSILGPTLWNVMYDSVLDVQLPEGAEIIAFADDLLLLDPGITPEAASQRAEEAVSA 704
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ W +++ P K+ V N+ P+ + R ++YLG
Sbjct: 705 VNLWMENHCLELAPAKTELVTISSKRQG---------NINVPVVINGVERRTTRSIRYLG 755
Query: 354 VTLDASMTFRPHIKSVRDRA 413
V +D ++++ H++ +A
Sbjct: 756 VVIDNQLSWKSHVEYCTTKA 775
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 33.5 bits (73), Expect = 0.006
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 3/154 (1%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDI---PRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG N++ L FADD + + ++++
Sbjct: 609 GVPQGSVLGPTLWNLMYNEVLGLTLYDGASLIGFADDIVLVAVGSRIDDLENTIETSINI 668
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ QW + +N +K+ +L I + +I +R +KYLG
Sbjct: 669 IRQWMESVELQLNISKTEYILVSSHRSRQESQ----------IIVEGHTIRSSRHLKYLG 718
Query: 354 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 455
+ +D + + HIK V +RA L M+ R
Sbjct: 719 IMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNR 752
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 30.7 bits (66), Expect = 0.046
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 1/143 (0%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPR-SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALG 179
GVPQG ND+ PP L+ADD ++ + S LQ A
Sbjct: 671 GVPQGCVLSPLLFSLFINDVCNVLPPDGHLLYADDIKIFLPVSSSS-DCMSLQHYLNAFV 729
Query: 180 QWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVT 359
W + + P K + + F ++ TL + S+ ++ LG+
Sbjct: 730 HWCSSNLLRLCPDKCSVISFSHSLSP----------ISFNYTLSNSSLSRVLSIRDLGII 779
Query: 360 LDASMTFRPHIKSVRDRAAFILG 428
LD+ + F+ + V +A LG
Sbjct: 780 LDSRLNFKLQLDEVLLKANRTLG 802
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 30.3 bits (65), Expect = 0.060
Identities = 22/112 (19%), Positives = 43/112 (38%)
Frame = +3
Query: 93 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXX 272
+ADD V A + A A+ W + + P K+ V+
Sbjct: 664 YADDIVVMARGCTPQEAALVAEQAVDAIAAWMEDHHLQLAPEKTEGVMISSLRRG----- 718
Query: 273 XXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILG 428
L P + I + ++YLGV + ++++PH++ +A ++G
Sbjct: 719 ----QLKVPFRVGDTIIHSKQSIRYLGVQIHDHLSWKPHVELSTAKALRVVG 766
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 29.1 bits (62), Expect = 0.14
Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 3/134 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPR---SPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 173
GVPQG N + P + FADD + + I +
Sbjct: 600 GVPQGSILGPTLWNVMYNGVLTLGLPPGPEVIGFADDIALTVLGESIEEIELLTSDSVSR 659
Query: 174 LGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 353
+ W ++ R++I K+ ++ + I + + I R +KYLG
Sbjct: 660 IESWMQQMRLEIAHKKTEFLIISSHKTVQ----------SGSIRVGDERIESIRHLKYLG 709
Query: 354 VTLDASMTFRPHIK 395
V +D ++FR H++
Sbjct: 710 VIIDDRLSFRKHVE 723
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 27.9 bits (59), Expect = 0.32
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 330 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMI 446
+R +KYLG+ LD + + HI+ +RA + L M+
Sbjct: 706 SRTLKYLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMM 744
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 26.6 bits (56), Expect = 0.74
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 333 RKVKYLGVTLDASMTFRPHIK 395
R +KYLGV +D + F+ H++
Sbjct: 764 RSLKYLGVVIDDRLKFKSHLE 784
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.4 bits (53), Expect = 1.7
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 297 PITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 413
PI + I + ++YLGV + +RPH+ ++A
Sbjct: 720 PIRVGGLEIRSKQAIRYLGVMIHDHFLWRPHVTMAVEKA 758
>Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein
protein.
Length = 192
Score = 24.6 bits (51), Expect = 3.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 147 KKLQSAALALGQWFRKWRIDINPTKSTAVL 236
KK L +G +FR WR I+ K A +
Sbjct: 73 KKFTIGTLGVGSFFRAWRNCIDEGKGLATI 102
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 24.6 bits (51), Expect = 3.0
Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 4/148 (2%)
Frame = +3
Query: 3 GVPQGXXXXXXXXXXXXNDIPRSPPTHLAL----FADDTTVYYSSRNKSLIAKKLQSAAL 170
GVPQG +D+ R P L FADD + R ++ +
Sbjct: 620 GVPQGSVLGPTLWNVMYDDLLRLPLEGLRADIIGFADDVAFTFLGRTTEQVSALATANLE 679
Query: 171 ALGQWFRKWRIDINPTKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYL 350
+ +W R +++ K+ ++F + SI +KYL
Sbjct: 680 RIERWLRGVGLELAHQKTGFMIFCTHHVPQLAE----------LQAGGHSIQSTETLKYL 729
Query: 351 GVTLDASMTFRPHIKSVRDRAAFILGRL 434
GV L H++ V ++A+ I L
Sbjct: 730 GVDLCRKQHHSRHLERVANKASRITNAL 757
>AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 5.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 339 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 437
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 5.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 339 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 437
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.4 bits (48), Expect = 6.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 365 IQGNAQVLDLPGPG 324
+ GN QV + PGPG
Sbjct: 220 LDGNVQVREAPGPG 233
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.0 bits (47), Expect = 9.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 529 HSRKS*RALCKFCKVSPCSEGTFYSRLQIMG*SLPRINAAR 407
HS R+LC +C S T S L+I R+NA +
Sbjct: 544 HSHTPQRSLCPYCPASYSRIDTLRSHLRIK--HADRLNAPK 582
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 23.0 bits (47), Expect = 9.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 529 HSRKS*RALCKFCKVSPCSEGTFYSRLQIMG*SLPRINAAR 407
HS R+LC +C S T S L+I R+NA +
Sbjct: 520 HSHTPQRSLCPYCPASYSRIDTLRSHLRIK--HADRLNAPK 558
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,625
Number of Sequences: 2352
Number of extensions: 16404
Number of successful extensions: 49
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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