Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2194
         (367 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   1.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   9.1  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 32  VHD*LPRVKEYHRVIKMKPAKL*FA*LLGGRTSCESARGRYHRPAY 169
           +HD  P + +  RV  ++  +L      GGR     AR R H PA+
Sbjct: 303 LHDHRPALAQQRRVAAVQVPQL----AGGGRRGPGPARSRRHLPAH 344


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 123 GPLVSPHGVGTTAPPIS 173
           G L  PH +G T  P+S
Sbjct: 6   GWLTPPHSLGNTVTPVS 22


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 133 TRGPTXQ*LRKL*FCGFHFYYTMVFL 56
           +RGP  Q  RK+    FHF     F+
Sbjct: 118 SRGPKWQNRRKILTPAFHFNILQEFI 143


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
 Frame = -2

Query: 366 FFFF---FLLLSCVDELTAHLM 310
           F FF    L L C+D  T HL+
Sbjct: 186 FIFFNMHLLFLLCLDYFTLHLL 207


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory
          receptor candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 93 FAGFIFITRWYSF 55
          +    FIT WY F
Sbjct: 21 YLNIFFITPWYDF 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,892
Number of Sequences: 336
Number of extensions: 1741
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)