Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2191
(587 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 76 3e-16
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 76 3e-16
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 76 3e-16
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 73 1e-15
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.63
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.63
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.63
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.63
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.63
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 24 1.1
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 23 1.9
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 23 1.9
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.5
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 5.8
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 50 LEDGRTLSDYNIQKESTLHLV 70
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 86 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 124
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 162 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 200
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 238 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 276
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 314 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 352
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 466 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 504
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 542 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 580
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 618 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 656
Score = 73.3 bits (172), Expect = 1e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQR IFA K
Sbjct: 390 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGK 428
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 50 LEDGRTLSDYNIQKESTLHLV 70
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 126 LEDGRTLSDYNIQKESTLHLV 146
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 202 LEDGRTLSDYNIQKESTLHLV 222
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 278 LEDGRTLSDYNIQKESTLHLV 298
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 354 LEDGRTLSDYNIQKESTLHLV 374
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 430 LEDGRTLSDYNIQKESTLHLV 450
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 506 LEDGRTLSDYNIQKESTLHLV 526
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 582 LEDGRTLSDYNIQKESTLHLV 602
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 658 LEDGRTLSDYNIQKESTLHLV 678
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 75.8 bits (178), Expect = 3e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48
Score = 35.1 bits (77), Expect = 4e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKE 205
LEDGRTLSDYNIQKE
Sbjct: 50 LEDGRTLSDYNIQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 73.3 bits (172), Expect = 1e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVEPSD IENVKAKIQDKEGIPP+QQR IFA K
Sbjct: 58 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGK 96
Score = 46.8 bits (106), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 22 LEDGRTLSDYNIQKESTLHLV 42
Score = 40.7 bits (91), Expect = 9e-06
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 96 KIQDKEGIPPNQQRLIFAWK 155
KIQDKEGIPP+QQRLIFA K
Sbjct: 1 KIQDKEGIPPDQQRLIFAGK 20
Score = 35.1 bits (77), Expect = 4e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKE 205
LEDGRTLSDYNIQKE
Sbjct: 98 LEDGRTLSDYNIQKE 112
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.63
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 497 LEGTYLXVVVFEDHRAVTLPAVVTVLHHR 411
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.63
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 497 LEGTYLXVVVFEDHRAVTLPAVVTVLHHR 411
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.63
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 497 LEGTYLXVVVFEDHRAVTLPAVVTVLHHR 411
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.63
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 497 LEGTYLXVVVFEDHRAVTLPAVVTVLHHR 411
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.63
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 497 LEGTYLXVVVFEDHRAVTLPAVVTVLHHR 411
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 23.8 bits (49), Expect = 1.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 387 CSPVHSRRRRWILPFSSTL*NLRTASLTFFFLCLIF 280
C P S R + + FS+T L A +TF + L F
Sbjct: 253 CRPTFSAARFYGIDFSNTFLGLVGAVVTFLIVLLQF 288
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -2
Query: 235 TKPQHQVEGGFLLDIVVREGTSIFQAAFQA 146
T ++ F + ++V G S+F FQA
Sbjct: 241 TSVMQKINSAFSVQLLVSIGVSLFDVLFQA 270
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -2
Query: 235 TKPQHQVEGGFLLDIVVREGTSIFQAAFQA 146
T ++ F + ++V G S+F FQA
Sbjct: 241 TSVMQKINSAFSVQLLVSIGVSLFDVLFQA 270
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -1
Query: 239 HHEASTPGGGWIPSGYCSPR 180
HH P GG P G PR
Sbjct: 63 HHYGGPPSGGQPPQGMPYPR 82
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 176 YVHLPSCFPSEDQPLLIGRDS 114
+ HL +PSEDQ + +D+
Sbjct: 354 FQHLTHPYPSEDQKKQLAQDT 374
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,159
Number of Sequences: 336
Number of extensions: 2401
Number of successful extensions: 37
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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