Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2191
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 73 2e-13
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 73 2e-13
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 73 2e-13
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 73 2e-13
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 58 3e-09
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 55 4e-08
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 55 4e-08
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 55 4e-08
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 37 0.012
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 36 0.021
Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 27 9.9
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 27 9.9
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 27 9.9
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 27 9.9
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 10 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 48
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 50 LEDGRTLSDYNIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 10 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 48
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 86 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 124
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 162 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 200
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 238 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 276
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 314 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 352
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 390 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 428
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFA 149
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA
Sbjct: 466 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 50 LEDGRTLSDYNIQKESTLHLV 70
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 126 LEDGRTLSDYNIQKESTLHLV 146
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 202 LEDGRTLSDYNIQKESTLHLV 222
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 278 LEDGRTLSDYNIQKESTLHLV 298
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 354 LEDGRTLSDYNIQKESTLHLV 374
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 430 LEDGRTLSDYNIQKESTLHLV 450
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 10 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 48
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 86 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 124
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 162 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 200
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 238 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 276
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 314 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 352
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 390 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 428
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 466 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 504
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 542 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 580
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 618 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 656
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 694 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 732
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 770 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 808
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 50 LEDGRTLSDYNIQKESTLHLV 70
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 126 LEDGRTLSDYNIQKESTLHLV 146
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 202 LEDGRTLSDYNIQKESTLHLV 222
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 278 LEDGRTLSDYNIQKESTLHLV 298
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 354 LEDGRTLSDYNIQKESTLHLV 374
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 430 LEDGRTLSDYNIQKESTLHLV 450
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 506 LEDGRTLSDYNIQKESTLHLV 526
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 582 LEDGRTLSDYNIQKESTLHLV 602
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 658 LEDGRTLSDYNIQKESTLHLV 678
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 734 LEDGRTLSDYNIQKESTLHLV 754
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 810 LEDGRTLSDYNIQKESTLHLV 830
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 10 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 48
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 86 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 124
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 162 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 200
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 238 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 276
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 314 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 352
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 390 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 428
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 466 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 504
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 542 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 580
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 618 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 656
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 694 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 732
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 770 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 808
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 50 LEDGRTLSDYNIQKESTLHLV 70
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 126 LEDGRTLSDYNIQKESTLHLV 146
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 202 LEDGRTLSDYNIQKESTLHLV 222
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 278 LEDGRTLSDYNIQKESTLHLV 298
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 354 LEDGRTLSDYNIQKESTLHLV 374
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 430 LEDGRTLSDYNIQKESTLHLV 450
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 506 LEDGRTLSDYNIQKESTLHLV 526
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 582 LEDGRTLSDYNIQKESTLHLV 602
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 658 LEDGRTLSDYNIQKESTLHLV 678
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 734 LEDGRTLSDYNIQKESTLHLV 754
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQK+STLHLV
Sbjct: 810 LEDGRTLSDYNIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GKTITLEVE SD IENVKAKIQDKEGIPP+QQRLIFA K
Sbjct: 10 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 48
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHLV 223
LEDGRTLSDYNIQKESTLHLV
Sbjct: 50 LEDGRTLSDYNIQKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 58.4 bits (135), Expect = 3e-09
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWK 155
GK I L++EP+D +E +K K+++KEGIPP QQRLIFA K
Sbjct: 10 GKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGK 48
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIP 122
GKTITLEVE SD IENVKAKIQDKEGIP
Sbjct: 10 GKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 54.8 bits (126), Expect = 4e-08
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 170 GRTL--SDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDE 343
GR L SD I E+T+++ Y+TP LAVL++YK+DE
Sbjct: 45 GRQLEDSDCGIDSEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDE 104
Query: 344 NGKIHRLRRECTGEQCG 394
NGKI RLR+EC CG
Sbjct: 105 NGKITRLRKECQQPSCG 121
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 399 GVFMAVMEDRHYCGKCHSTMV 461
GVFMA +RHYCG+CH T+V
Sbjct: 123 GVFMAQHANRHYCGRCHDTLV 143
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 KTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWKAAWKMD--VPSRTTI 194
+T+ LEV ++ + ++K KI+ EGIP +QRL +A + D + S TI
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDSDCGIDSEATI 61
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 54.8 bits (126), Expect = 4e-08
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 170 GRTL--SDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDE 343
GR L SD I E+T+++ Y+TP LAVL++YK+DE
Sbjct: 45 GRQLEDSDCGIDSEATIYVNLELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDE 104
Query: 344 NGKIHRLRRECTGEQCG 394
NGKI RLR+EC CG
Sbjct: 105 NGKITRLRKECQQPSCG 121
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 399 GVFMAVMEDRHYCGKCHSTMV 461
GVFMA +RHYCG+CH T+V
Sbjct: 123 GVFMAQHANRHYCGRCHDTLV 143
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 KTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWKAAWKMD--VPSRTTI 194
+T+ LEV ++ + ++K KI+ EGIP +QRL +A + D + S TI
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDSDCGIDSEATI 61
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIF 146
GKTI + ++ +D +E +K K+Q+K G+PP+QQRLIF
Sbjct: 170 GKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIF 205
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 164 EDGRTLSDYNIQKESTLHL 220
+D RT+SDYNI+ STL L
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 27 RPSRGKTITLEVEPSDXIENVKAKIQDKEGI 119
+ S GKTIT+E +NVK +++DK+G+
Sbjct: 64 KTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 39 GKTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFAWKAAWKMDV 176
G+T TL+ SD + +VKAKI +K I PN Q+L+ W +D+
Sbjct: 111 GRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLL---ENWDLDL 153
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 42 KTITLEVEPSDXIENVKAKIQDKEGIPPNQQRLIFA 149
+T+ LEV ++ + ++K KI+ EGIP +QRL +A
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYA 44
>Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical
protein F34H10.1 protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 323 RFYKVDENGKIHRLRRECTGEQCGARSVHGGDGGPSLLREVSQH 454
+++K+DENGKI RL TG + P+ LR++SQH
Sbjct: 99 KYFKIDENGKISRLP---TGILTASIQREAFMTQPTTLRKMSQH 139
>Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical
protein K08C9.7 protein.
Length = 154
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 323 RFYKVDENGKIHRLRRECTGEQCGARSVHGGDGGPSLLREVSQH 454
+++K+DENGKI RL TG + P+ LR++SQH
Sbjct: 111 KYFKIDENGKISRLP---TGIPTVSIQREAFMTQPTTLRKMSQH 151
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPSCFPSE 144
S PGG +PSG +G +H+P E
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQE 1285
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPSCFPSE 144
S PGG +PSG +G +H+P E
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQE 1378
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPSCFPSE 144
S PGG +PSG +G +H+P E
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQE 1378
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPSCFPSE 144
S PGG +PSG +G +H+P E
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQE 1378
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPSCFPSE 144
S PGG +PSG +G +H+P E
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQE 1285
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPSCFPSE 144
S PGG +PSG +G +H+P E
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQE 1378
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPSCFPSE 144
S PGG +PSG +G +H+P E
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQE 1378
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPSCFPSE 144
S PGG +PSG +G +H+P E
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQE 1378
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTLHL 220
LED TL+ YNIQ+ STL L
Sbjct: 222 LEDDHTLAYYNIQEGSTLGL 241
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 161 LEDGRTLSDYNIQKESTL 214
LED ++ DYNIQK ST+
Sbjct: 202 LEDHCSIGDYNIQKSSTI 219
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPSCFPSE 144
S PGG +PSG +G +H+P E
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQE 1377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,380,689
Number of Sequences: 27780
Number of extensions: 238614
Number of successful extensions: 709
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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