Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2189
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    27   0.52 
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    24   4.9  
AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450 CY...    23   6.5  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.52
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +3

Query: 285 EIKSFFKLTQPKIAFCQQNQRENYLEAARELGLDTRVITFDGDEPMSKL 431
           EI S  KLT+ +I    QN+R    +       +T  +T+DG+ P   L
Sbjct: 38  EIASMLKLTERQIKIWFQNRRMK-AKKDNSASANTPDLTYDGEIPQQSL 85


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 398 DDSGVKP*FAGSFQVIFPLILLTKRYFWLRQFKKAFDF 285
           DD+  K  FAG +Q + P+ L+T        F K F +
Sbjct: 64  DDNKGKHPFAGMYQFVKPVALITDLELLKCVFVKDFQY 101


>AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450
           CYP4C26 protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +3

Query: 9   SIPHGTS----IYGLHEKTT*FSVPDR 77
           +IP GT+    +Y LH  T+ FS PD+
Sbjct: 92  TIPAGTTAMIVVYELHRDTSVFSNPDK 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,991
Number of Sequences: 2352
Number of extensions: 10862
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)