Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2188
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E475B3 Cluster: PREDICTED: similar to MGC82305 p... 52 2e-05
UniRef50_A7S1Y3 Cluster: Predicted protein; n=1; Nematostella ve... 51 2e-05
UniRef50_Q6PEC1 Cluster: Tubulin-specific chaperone A; n=11; Tet... 50 4e-05
UniRef50_O75347 Cluster: Tubulin-specific chaperone A; n=18; Coe... 50 4e-05
UniRef50_Q4PF41 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_O04350 Cluster: Tubulin-specific chaperone A; n=6; Magn... 43 0.008
UniRef50_A0CEW7 Cluster: Chromosome undetermined scaffold_173, w... 42 0.010
UniRef50_Q6K6A7 Cluster: Putative tubulin folding cofactor A; n=... 42 0.013
UniRef50_Q6C8G6 Cluster: Similar to sp|P48606 Saccharomyces cere... 38 0.21
UniRef50_Q5BT49 Cluster: SJCHGC02752 protein; n=1; Schistosoma j... 36 1.1
UniRef50_Q1V1W0 Cluster: Putative uncharacterized protein; n=2; ... 35 2.0
UniRef50_Q4RXS1 Cluster: Chromosome 11 SCAF14979, whole genome s... 34 3.5
UniRef50_Q6BKW3 Cluster: Similar to CA0436|CaRBL2 Candida albica... 34 3.5
>UniRef50_UPI0000E475B3 Cluster: PREDICTED: similar to MGC82305
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC82305 protein -
Strongylocentrotus purpuratus
Length = 86
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +1
Query: 55 RIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRSVAPF 174
+++R K G+DE+ IRKQ EVL+ES MMVPDC RR A +
Sbjct: 12 KVERFKAGGKDEYEIRKQIEVLEESKMMVPDCTRRIKAAY 51
Score = 33.5 bits (73), Expect = 4.6
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 552 RLIKAYTDLKTTLETEQDLKEHEEYITAEQVL 647
R+ AY DLK L+ E++LKE EEY A +L
Sbjct: 46 RIKAAYGDLKNLLDQEEELKETEEYKVAAALL 77
>UniRef50_A7S1Y3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 112
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = +1
Query: 46 QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRR 159
Q +++ + E QDEH+I+KQ+EVL+ES +M+PDC+RR
Sbjct: 36 QGKKVENMIAENQDEHDIKKQKEVLEESRIMIPDCKRR 73
>UniRef50_Q6PEC1 Cluster: Tubulin-specific chaperone A; n=11;
Tetrapoda|Rep: Tubulin-specific chaperone A - Rattus
norvegicus (Rat)
Length = 108
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +1
Query: 46 QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRSVAPF 174
Q+ +I+++K E + + I+KQ E+LQES MM+PDCQRR A +
Sbjct: 33 QEEKIEKMKAEDGENYAIKKQAEILQESRMMIPDCQRRLEAAY 75
Score = 37.5 bits (83), Expect = 0.28
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 552 RLIKAYTDLKTTLETEQDLKEHEEYITAEQVL 647
RL AYTDL+ LE+E+DL+E EEY A VL
Sbjct: 70 RLEAAYTDLRQILESEKDLEEAEEYKEARIVL 101
>UniRef50_O75347 Cluster: Tubulin-specific chaperone A; n=18;
Coelomata|Rep: Tubulin-specific chaperone A - Homo
sapiens (Human)
Length = 108
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/43 (46%), Positives = 33/43 (76%)
Frame = +1
Query: 46 QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRSVAPF 174
Q+ +I++++ E + ++I+KQ E+LQES MM+PDCQRR A +
Sbjct: 33 QEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAY 75
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +3
Query: 552 RLIKAYTDLKTTLETEQDLKEHEEYITAEQVL 647
RL AY DL+ LE E+DL+E EEY A VL
Sbjct: 70 RLEAAYLDLQRILENEKDLEEAEEYKEARLVL 101
>UniRef50_Q4PF41 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 176
Score = 44.4 bits (100), Expect = 0.002
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +1
Query: 46 QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRR 159
Q+ RI + D G+DE+++++Q VL ++L M+PDC++R
Sbjct: 65 QETRIAQFIDAGRDEYDVKQQRSVLADTLKMIPDCRKR 102
>UniRef50_O04350 Cluster: Tubulin-specific chaperone A; n=6;
Magnoliophyta|Rep: Tubulin-specific chaperone A -
Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 42.7 bits (96), Expect = 0.008
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +1
Query: 67 IKDEGQDEHNIRKQEEVLQESLMMVPDCQRR 159
+KD+G D +++++QE VL ES MM+PDC +R
Sbjct: 38 MKDKGADPYDLKQQENVLGESRMMIPDCHKR 68
>UniRef50_A0CEW7 Cluster: Chromosome undetermined scaffold_173,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_173,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 120
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +1
Query: 46 QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRSV 165
Q RIQ++K++ +E +I+KQEEVLQE++ M P+ R V
Sbjct: 35 QNERIQKLKNQNAEEADIKKQEEVLQETVQMYPNIIGRLV 74
>UniRef50_Q6K6A7 Cluster: Putative tubulin folding cofactor A; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
tubulin folding cofactor A - Oryza sativa subsp.
japonica (Rice)
Length = 90
Score = 41.9 bits (94), Expect = 0.013
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +1
Query: 67 IKDEGQDEHNIRKQEEVLQESLMMVPDCQRR 159
+K++G D +++++QE VL ES MMVPDC +R
Sbjct: 38 MKEKGADPYDLKQQENVLAESRMMVPDCHKR 68
>UniRef50_Q6C8G6 Cluster: Similar to sp|P48606 Saccharomyces
cerevisiae Tubulin-specific chaperone A; n=2;
Saccharomycetales|Rep: Similar to sp|P48606
Saccharomyces cerevisiae Tubulin-specific chaperone A -
Yarrowia lipolytica (Candida lipolytica)
Length = 106
Score = 37.9 bits (84), Expect = 0.21
Identities = 15/38 (39%), Positives = 29/38 (76%)
Frame = +1
Query: 46 QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRR 159
Q R++++K G+DE++I+KQ EVL+++ MVP +++
Sbjct: 29 QAARVEKMKANGEDEYDIKKQIEVLKDTEQMVPVMRKK 66
>UniRef50_Q5BT49 Cluster: SJCHGC02752 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02752 protein - Schistosoma
japonicum (Blood fluke)
Length = 99
Score = 35.5 bits (78), Expect = 1.1
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 85 DEHNIRKQEEVLQESLMMVPDCQRR 159
+EH+I+ + +L ES MM+PDCQ R
Sbjct: 46 EEHDIKMAKAILDESKMMIPDCQSR 70
>UniRef50_Q1V1W0 Cluster: Putative uncharacterized protein; n=2;
Candidatus Pelagibacter ubique|Rep: Putative
uncharacterized protein - Candidatus Pelagibacter ubique
HTCC1002
Length = 457
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -3
Query: 349 FIFKIEIGNKISIHDLYSTYMCLYQFRHVLTIWELYSLNKENLH*FVIFQLFLRYNIIK 173
+ FKI +G I + + + CLY + TI + +NK F+IF + YN IK
Sbjct: 156 YYFKIRLGYLSKIIETFLLFYCLYNNYNFETIVLYFLINKIFFFIFIIFDIVKSYNWIK 214
>UniRef50_Q4RXS1 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=7; Euteleostomi|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1144
Score = 33.9 bits (74), Expect = 3.5
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = +3
Query: 408 NAKYLLF---RYISLCSASRIDTFNNNVIIAIS-IY*VVCNIYFKGF---YKLHYRLIKA 566
N YLL R S A+ D + NNVI+ ++ I V ++ K ++H L+K
Sbjct: 76 NCWYLLLTQARRESRDHATLSDIYTNNVIVRLAQISEDVIRLFKKSKEIGIQMHEELVKV 135
Query: 567 YTDLKTTLETEQDLKEHEEYITAEQVLKDAE 659
+L T ++T H E I+AE LKDAE
Sbjct: 136 TNELYTVMKTYH--MYHTESISAESKLKDAE 164
>UniRef50_Q6BKW3 Cluster: Similar to CA0436|CaRBL2 Candida albicans
CaRBL2 Beta-tubulin binding protein; n=1; Debaryomyces
hansenii|Rep: Similar to CA0436|CaRBL2 Candida albicans
CaRBL2 Beta-tubulin binding protein - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 99
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 46 QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRR 159
Q++ + ++K DE+ ++KQ +VL+ES MVP+ +
Sbjct: 30 QQHFVNQMKSNNADEYELKKQIQVLEESQRMVPEVSEK 67
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,054,483
Number of Sequences: 1657284
Number of extensions: 8688211
Number of successful extensions: 18919
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18919
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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