Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2188
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061088-1|AAL28636.1|  110|Drosophila melanogaster LD07673p pro...    51   2e-06
AE014297-4794|AAF57186.1|  110|Drosophila melanogaster CG1890-PA...    51   2e-06
BT022809-1|AAY55225.1|  149|Drosophila melanogaster IP07373p pro...    31   1.4  
AE014298-2105|AAF48425.1|  149|Drosophila melanogaster CG9072-PA...    31   1.4  
AE013599-2843|AAS64806.1|  173|Drosophila melanogaster CG33454-P...    29   7.4  
AE013599-3880|AAF47212.1|  193|Drosophila melanogaster CG13590-P...    28   9.8  
AE013599-3879|AAF47211.2|  174|Drosophila melanogaster CG13589-P...    28   9.8  

>AY061088-1|AAL28636.1|  110|Drosophila melanogaster LD07673p
           protein.
          Length = 110

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 19/38 (50%), Positives = 32/38 (84%)
 Frame = +1

Query: 46  QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRR 159
           ++ R+++++ +G D+H +RKQEEV+QE +MMVPD +RR
Sbjct: 33  EQARLEKLRGDGADDHVLRKQEEVIQECIMMVPDSKRR 70



 Score = 32.3 bits (70), Expect = 0.60
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +3

Query: 552 RLIKAYTDLKTTLETEQDLKEHEEYITAEQVLKDAE 659
           RL K Y  L+  L  EQDL E + Y  A ++LKDA+
Sbjct: 70  RLQKEYEVLEKYLADEQDLIETDSYKKAAEILKDAK 105


>AE014297-4794|AAF57186.1|  110|Drosophila melanogaster CG1890-PA
           protein.
          Length = 110

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 19/38 (50%), Positives = 32/38 (84%)
 Frame = +1

Query: 46  QKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRR 159
           ++ R+++++ +G D+H +RKQEEV+QE +MMVPD +RR
Sbjct: 33  EQARLEKLRGDGADDHVLRKQEEVIQECIMMVPDSKRR 70



 Score = 32.3 bits (70), Expect = 0.60
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +3

Query: 552 RLIKAYTDLKTTLETEQDLKEHEEYITAEQVLKDAE 659
           RL K Y  L+  L  EQDL E + Y  A ++LKDA+
Sbjct: 70  RLQKEYEVLEKYLADEQDLIETDSYKKAAEILKDAK 105


>BT022809-1|AAY55225.1|  149|Drosophila melanogaster IP07373p
           protein.
          Length = 149

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/34 (35%), Positives = 24/34 (70%)
 Frame = +1

Query: 43  LQKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVP 144
           L+  R++R + EG +E  ++ QE+VL+++  M+P
Sbjct: 65  LELQRLERFRSEGANERRLQIQEQVLKKAQGMLP 98


>AE014298-2105|AAF48425.1|  149|Drosophila melanogaster CG9072-PA
           protein.
          Length = 149

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/34 (35%), Positives = 24/34 (70%)
 Frame = +1

Query: 43  LQKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVP 144
           L+  R++R + EG +E  ++ QE+VL+++  M+P
Sbjct: 65  LELQRLERFRSEGANERRLQIQEQVLKKAQGMLP 98


>AE013599-2843|AAS64806.1|  173|Drosophila melanogaster CG33454-PA
           protein.
          Length = 173

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 507 VVCNIYFKGFYKLHYRLIKAYTDLKTTL 590
           VVC  Y K     HY  +KAY+  KT+L
Sbjct: 30  VVCESYDKSLTVFHYCRLKAYSRTKTSL 57


>AE013599-3880|AAF47212.1|  193|Drosophila melanogaster CG13590-PA
           protein.
          Length = 193

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 510 VCNIYFKGFYKLHYRLIKAYTDLKTTL 590
           VC  Y K +  +HY  +KAY+  KT+L
Sbjct: 31  VCKSYNKSWVVVHYCRLKAYSRAKTSL 57


>AE013599-3879|AAF47211.2|  174|Drosophila melanogaster CG13589-PA
           protein.
          Length = 174

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 510 VCNIYFKGFYKLHYRLIKAYTDLKTTL 590
           VC  Y K +  +HY  +KAY+  KT+L
Sbjct: 31  VCKSYNKSWVVVHYCRLKAYSRTKTSL 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,695,996
Number of Sequences: 53049
Number of extensions: 383330
Number of successful extensions: 679
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)