Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2187
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012669-1|AAT08475.1|   46|Drosophila melanogaster LD48059p pro...    54   1e-07
AE014134-1121|AAN10589.1|  388|Drosophila melanogaster CG11050-P...    30   2.4  
AE014134-1120|AAN10588.1|  388|Drosophila melanogaster CG11050-P...    30   2.4  
AE014134-1119|AAF52408.1|  388|Drosophila melanogaster CG11050-P...    30   2.4  
EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire prot...    30   3.2  
Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein.     29   4.2  
Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein.     29   4.2  
AY051596-1|AAK93020.1|  969|Drosophila melanogaster GH23814p pro...    29   4.2  
AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB,...    29   4.2  
AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA,...    29   4.2  
AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,...    29   4.2  
EF120981-1|ABO93159.1|  637|Drosophila melanogaster misfire prot...    29   7.4  
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    29   7.4  
EF120978-1|ABO93156.1|  839|Drosophila melanogaster misfire prot...    29   7.4  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    29   7.4  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    29   7.4  
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA...    29   7.4  

>BT012669-1|AAT08475.1|   46|Drosophila melanogaster LD48059p
           protein.
          Length = 46

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +1

Query: 1   PKDGELCLVRSKSGETLMEDRSDSDVQIDRRN 96
           PKDGEL L+R KSGETLMEDR+ SDVQID +N
Sbjct: 15  PKDGELYLIRLKSGETLMEDRNSSDVQIDCQN 46


>AE014134-1121|AAN10589.1|  388|Drosophila melanogaster CG11050-PC,
           isoform C protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -3

Query: 508 GWLLRQVSRCTLLSG--FRLSMATVLL 434
           GW+LR V+ C  +SG  +R+SM T LL
Sbjct: 197 GWVLRDVNDCESISGHMYRMSMLTFLL 223


>AE014134-1120|AAN10588.1|  388|Drosophila melanogaster CG11050-PB,
           isoform B protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -3

Query: 508 GWLLRQVSRCTLLSG--FRLSMATVLL 434
           GW+LR V+ C  +SG  +R+SM T LL
Sbjct: 197 GWVLRDVNDCESISGHMYRMSMLTFLL 223


>AE014134-1119|AAF52408.1|  388|Drosophila melanogaster CG11050-PA,
           isoform A protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -3

Query: 508 GWLLRQVSRCTLLSG--FRLSMATVLL 434
           GW+LR V+ C  +SG  +R+SM T LL
Sbjct: 197 GWVLRDVNDCESISGHMYRMSMLTFLL 223


>EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire
           protein.
          Length = 1349

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 456 SRNPLRSVQRLTCRSNQP*KWMALKR 533
           SRNPLR +QRL   +  P KW+ + R
Sbjct: 479 SRNPLRKLQRLKYLTPPPLKWVPIAR 504


>Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein.
          Length = 3347

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +2

Query: 236  NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 409
            NDLN +  F WV T    N E+ DL +++PS    +S+  GA+  ++R+    +  SWD+
Sbjct: 2712 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 2767


>Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein.
          Length = 3554

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +2

Query: 236  NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 409
            NDLN +  F WV T    N E+ DL +++PS    +S+  GA+  ++R+    +  SWD+
Sbjct: 2919 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 2974


>AY051596-1|AAK93020.1|  969|Drosophila melanogaster GH23814p
           protein.
          Length = 969

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +2

Query: 236 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 409
           NDLN +  F WV T    N E+ DL +++PS    +S+  GA+  ++R+    +  SWD+
Sbjct: 334 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 389


>AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB,
            isoform B protein.
          Length = 3522

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +2

Query: 236  NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 409
            NDLN +  F WV T    N E+ DL +++PS    +S+  GA+  ++R+    +  SWD+
Sbjct: 2887 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 2942


>AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA,
            isoform A protein.
          Length = 3584

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +2

Query: 236  NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 409
            NDLN +  F WV T    N E+ DL +++PS    +S+  GA+  ++R+    +  SWD+
Sbjct: 2949 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 3004


>AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,
            isoform C protein.
          Length = 3719

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +2

Query: 236  NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 409
            NDLN +  F WV T    N E+ DL +++PS    +S+  GA+  ++R+    +  SWD+
Sbjct: 3084 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 3139


>EF120981-1|ABO93159.1|  637|Drosophila melanogaster misfire
           protein.
          Length = 637

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 456 SRNPLRSVQRLTCRSNQP*KWMALKR 533
           S+NPLR +QRL   +  P KW+ + R
Sbjct: 477 SKNPLRKLQRLKYLTPPPLKWVPIAR 502


>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 456 SRNPLRSVQRLTCRSNQP*KWMALKR 533
           S+NPLR +QRL   +  P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592


>EF120978-1|ABO93156.1|  839|Drosophila melanogaster misfire
           protein.
          Length = 839

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 456 SRNPLRSVQRLTCRSNQP*KWMALKR 533
           S+NPLR +QRL   +  P KW+ + R
Sbjct: 28  SKNPLRKLQRLKYLTPPPLKWVPIAR 53


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 456 SRNPLRSVQRLTCRSNQP*KWMALKR 533
           S+NPLR +QRL   +  P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 456 SRNPLRSVQRLTCRSNQP*KWMALKR 533
           S+NPLR +QRL   +  P KW+ + R
Sbjct: 789 SKNPLRKLQRLKYLTPPPLKWVPIAR 814


>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
           protein.
          Length = 1782

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 456 SRNPLRSVQRLTCRSNQP*KWMALKR 533
           S+NPLR +QRL   +  P KW+ + R
Sbjct: 751 SKNPLRKLQRLKYLTPPPLKWVPIAR 776


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,953,886
Number of Sequences: 53049
Number of extensions: 709360
Number of successful extensions: 1413
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)