Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2182
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.3  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   5.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.2  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    23   9.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 577  VDCLSEISHSGTGMNXXGWSPFEL 506
            V+C  ++ H   G +  GWS  E+
Sbjct: 1406 VNCNGKVVHGSVGFSIGGWSYVEV 1429


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 577  VDCLSEISHSGTGMNXXGWSPFEL 506
            V+C  ++ H   G +  GWS  E+
Sbjct: 1407 VNCNGKVVHGSVGFSIGGWSYVEV 1430


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +3

Query: 495 YKSFNSNGDQPXXFIPVPEWLISLKQSTTGTRTKHGVFQIFFGGAST 635
           Y   +S G +P      P W+  L+     TRTK G  Q +  G S+
Sbjct: 288 YPQGDSEG-RPCSKAEKPAWMRRLENRINATRTKIGRMQEYQRGNSS 333


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 519  DQPXXFIPVPEWLISLKQSTTGTRTKHGVFQIFFG-GASTAAPESDV 656
            + P  F  V  WL+    +    R    + Q FFG G+S++    D+
Sbjct: 3188 EPPRLFEYVDSWLLLAHVAPAAVREVKRIVQNFFGWGSSSSRTTKDL 3234


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 293 CVSSTEGAAMVSAGLIKCSVSFNFCI 216
           C+  T G  +V  GL+    SF F +
Sbjct: 231 CIGDTFGLMLVKVGLVAMVRSFRFTL 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,421
Number of Sequences: 2352
Number of extensions: 12097
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)