Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2182
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089407-1|AAL90145.1|  440|Drosophila melanogaster AT23003p pro...    29   8.0  
AE014297-812|AAF54285.2|  440|Drosophila melanogaster CG8236-PA ...    29   8.0  

>AY089407-1|AAL90145.1|  440|Drosophila melanogaster AT23003p
           protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/74 (21%), Positives = 36/74 (48%)
 Frame = +1

Query: 160 QINELQASLQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIESGLKSL 339
           ++ E    +Q++  +   +   + + +  ++P D ++A S E+++ +     +E G K +
Sbjct: 118 RLRERVKRIQNYDYSKSDEDIYIRDEMQEVRPEDYMSAESSEKSEEEEDHVLLEIGRKKV 177

Query: 340 ETNFNSXS*SAI*R 381
           E  FN    S I R
Sbjct: 178 EEYFNESDHSDIVR 191


>AE014297-812|AAF54285.2|  440|Drosophila melanogaster CG8236-PA
           protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/74 (21%), Positives = 36/74 (48%)
 Frame = +1

Query: 160 QINELQASLQHFQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIESGLKSL 339
           ++ E    +Q++  +   +   + + +  ++P D ++A S E+++ +     +E G K +
Sbjct: 118 RLRERVKRIQNYDYSKSDEDIYIRDEMQEVRPEDYMSAESSEKSEEEEDHVLLEIGRKKV 177

Query: 340 ETNFNSXS*SAI*R 381
           E  FN    S I R
Sbjct: 178 EEYFNESDHSDIVR 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,106,761
Number of Sequences: 53049
Number of extensions: 483016
Number of successful extensions: 1573
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)