Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2182
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 31 0.79
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 2.4
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 2.4
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 2.4
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 5.6
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 28 7.4
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 9.8
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 9.8
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 469 STVTSTNGPTNPLIQMVT-NLXNSFLSRNG*SHSSNQQLELEPSMECSKY 615
+++ + NGP PL+Q ++ NL + S++G S Q LE+ SM+ ++Y
Sbjct: 463 NSMNAANGPRAPLVQAISRNLITNVFSKDGTELSVEQLLEI-VSMKLAQY 511
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 2.4
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Frame = +1
Query: 52 KIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGA------ 213
+I ++ DIN EIAL + +D EQ+ ELQ ++ Q N GA
Sbjct: 1622 RIKKKLEGDINELEIALDHANKANADAQKNLKRYQEQVRELQLQVEEEQRN-GADTREQF 1680
Query: 214 -QIQKLNETLHFIKPADTIAAPSVEETQNKASFETIESGLKSLETN 348
+K L K +A + E + +A +E ++ ++ E N
Sbjct: 1681 FNAEKRATLLQSEKEELLVANEAAERARKQAEYEAADARDQANEAN 1726
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 2.4
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Frame = +1
Query: 52 KIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGA------ 213
+I ++ DIN EIAL + +D EQ+ ELQ ++ Q N GA
Sbjct: 1622 RIKKKLEGDINELEIALDHANKANADAQKNLKRYQEQVRELQLQVEEEQRN-GADTREQF 1680
Query: 214 -QIQKLNETLHFIKPADTIAAPSVEETQNKASFETIESGLKSLETN 348
+K L K +A + E + +A +E ++ ++ E N
Sbjct: 1681 FNAEKRATLLQSEKEELLVANEAAERARKQAEYEAADARDQANEAN 1726
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.5 bits (63), Expect = 2.4
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Frame = +1
Query: 52 KIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGA------ 213
+I ++ DIN EIAL + +D EQ+ ELQ ++ Q N GA
Sbjct: 1625 RIKKKLEGDINELEIALDHANKANADAQKNLKRYQEQVRELQLQVEEEQRN-GADTREQF 1683
Query: 214 -QIQKLNETLHFIKPADTIAAPSVEETQNKASFETIESGLKSLETN 348
+K L K +A + E + +A +E ++ ++ E N
Sbjct: 1684 FNAEKRATLLQSEKEELLVANEAAERARKQAEYEAADARDQANEAN 1729
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 166 NELQASLQHFQENFGAQIQK-LNETLHFIKPADTIAAPSVEETQNKASFETIE-SGLK 333
NE+ A L+H QE F ++ K LN++++ K D + ++ +E SGLK
Sbjct: 724 NEITARLKHDQEYFEDELAKLLNDSMNIKKERDDYLTEHIRANESMIERLKLEISGLK 781
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 166 NELQASLQHFQENFGAQIQK-LNETLHFIKPADTIAAPSVEETQNKASFETIE-SGLK 333
NE+ A L+H QE F ++ K LN++++ K D + ++ +E SGLK
Sbjct: 724 NEITARLKHDQEYFEDELAKLLNDSMNIKKERDDYLTEHIRANESMIERLKLEISGLK 781
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 166 NELQASLQHFQENFGAQIQKLNETLH 243
N L LQ+FQE F + QKLN+ H
Sbjct: 695 NSLPQILQYFQEMFPVRNQKLNKPSH 720
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.5 bits (58), Expect = 9.8
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Frame = +1
Query: 52 KIVSSVKNDINTAEIAL---RQGFQEVSDGIGKWYARTE----QINELQASLQHFQENFG 210
+I +++DIN EIAL + + + I K+ + QI E Q +E F
Sbjct: 1626 RIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQKDEIREQFL 1685
Query: 211 AQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIE 321
A +K N L K A + E + A E IE
Sbjct: 1686 AS-EKRNAILQSEKDELAQQAEAAERARRNAEAECIE 1721
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.5 bits (58), Expect = 9.8
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Frame = +1
Query: 52 KIVSSVKNDINTAEIAL---RQGFQEVSDGIGKWYARTE----QINELQASLQHFQENFG 210
+I +++DIN EIAL + + + I K+ + QI E Q +E F
Sbjct: 1626 RIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQKDEIREQFL 1685
Query: 211 AQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIE 321
A +K N L K A + E + A E IE
Sbjct: 1686 AS-EKRNAILQSEKDELAQQAEAAERARRNAEAECIE 1721
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,504,886
Number of Sequences: 27780
Number of extensions: 253283
Number of successful extensions: 702
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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