Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2175
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   2.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   3.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.8  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/55 (21%), Positives = 27/55 (49%)
 Frame = +3

Query: 24  GIMKTFIVFVVCVVLAQALTDEQKENLKKHRADCLAETKADEQLVNKLKTGDFKT 188
           G + T++  V  ++L +  T  + + + ++  DC+ +     +   KLK G  +T
Sbjct: 11  GALLTYVSSVEYLILREIDTILKNDQMTRNYLDCVLDKGKCTKEAEKLKKGITET 65


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 510 YIGEYCNLXWGYYSNF 557
           YI + C L  G+Y NF
Sbjct: 201 YIKQVCKLNNGHYKNF 216


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 510 YIGEYCNLXWGYYSNF 557
           YI + C L  G+Y NF
Sbjct: 26  YIKQVCKLNNGHYKNF 41


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 423 RERASGLSRGSISRNSRLFGEG 358
           R   S  ++G  SRNS+  G G
Sbjct: 397 RNNTSSRAQGETSRNSKNSGNG 418


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -3

Query: 627 KIKFLXSIEYVQHQNKIY 574
           +IKF+   EY+  ++K++
Sbjct: 145 EIKFIRKEEYISFESKVF 162


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = -2

Query: 220 HRAYFFNGSFSVLKSPVFSLFTSCSSAFVSARQSALCFFKFS 95
           H  +  + +  +LK+P  S    C+ A        +C++ F+
Sbjct: 85  HLDFRNSATAELLKNPSLSSPDECARACREGEPPRICYYHFT 126


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = -2

Query: 220 HRAYFFNGSFSVLKSPVFSLFTSCSSAFVSARQSALCFFKFS 95
           H  +  + +  +LK+P  S    C+ A        +C++ F+
Sbjct: 85  HLDFRNSATAELLKNPSLSSPDECARACREGEPPRICYYHFT 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,530
Number of Sequences: 336
Number of extensions: 2694
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)