Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2171
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089504-1|AAL90242.1| 1012|Drosophila melanogaster GH13383p pro...    29   4.1  
AY061596-1|AAL29144.1|  751|Drosophila melanogaster SD04745p pro...    29   4.1  
AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-P...    29   4.1  
BT029934-1|ABM92808.1| 1442|Drosophila melanogaster IP14638p pro...    29   7.2  
AE013599-3499|AAF46925.1| 1439|Drosophila melanogaster CG3695-PA...    29   7.2  

>AY089504-1|AAL90242.1| 1012|Drosophila melanogaster GH13383p
           protein.
          Length = 1012

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 350 LGPIDDERRKFLEDALKSLTVNIAEVLLNA 439
           LG + D+ R+FL++A KS+    AE+L NA
Sbjct: 892 LGGLTDDLRRFLKNAPKSVPAINAEILANA 921


>AY061596-1|AAL29144.1|  751|Drosophila melanogaster SD04745p
           protein.
          Length = 751

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 350 LGPIDDERRKFLEDALKSLTVNIAEVLLNA 439
           LG + D+ R+FL++A KS+    AE+L NA
Sbjct: 301 LGGLTDDLRRFLKNAPKSVPAINAEILANA 330


>AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-PA
           protein.
          Length = 1330

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 350 LGPIDDERRKFLEDALKSLTVNIAEVLLNA 439
           LG + D+ R+FL++A KS+    AE+L NA
Sbjct: 892 LGGLTDDLRRFLKNAPKSVPAINAEILANA 921


>BT029934-1|ABM92808.1| 1442|Drosophila melanogaster IP14638p protein.
          Length = 1442

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 184  SNNTQNNTIAGALTYPTRSQDEVLPNQPRQPRNLQ 288
            ++NT NN I      P ++Q +  P QP Q +  Q
Sbjct: 1340 NDNTSNNAITSQTQSPMQTQHQQQPQQPHQQQQQQ 1374


>AE013599-3499|AAF46925.1| 1439|Drosophila melanogaster CG3695-PA
            protein.
          Length = 1439

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 184  SNNTQNNTIAGALTYPTRSQDEVLPNQPRQPRNLQ 288
            ++NT NN I      P ++Q +  P QP Q +  Q
Sbjct: 1338 NDNTSNNAITSQTQSPMQTQHQQQPQQPHQQQQQQ 1372


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,437,870
Number of Sequences: 53049
Number of extensions: 543965
Number of successful extensions: 1733
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)