Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2163
(691 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 249 3e-67
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 239 3e-64
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 214 9e-57
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 202 3e-53
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 145 5e-36
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 86 5e-18
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 66 3e-12
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 46 7e-06
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.27
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.84
SPBC1A4.06c |||mitochondrial matrix protein import protein|Schiz... 27 3.4
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 26 4.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 7.8
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 7.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 249 bits (610), Expect = 3e-67
Identities = 125/198 (63%), Positives = 144/198 (72%)
Frame = +2
Query: 74 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 254 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 433
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 434 KMKETAEAYLGKTVQNAVITVPRVLQ*LSKTSHKRCRYHLWLERSPNHQ*TDCCCDCLRS 613
KM+ETAEAYLG V +AV+TVP + + K L
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 614 *QKGTGKRNVLIFDLGGG 667
+ G+ NVLIFDLGGG
Sbjct: 184 DRSNQGESNVLIFDLGGG 201
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +3
Query: 498 PAYFNDSQRQATKDAGTIXGLNVLRIINEPTAAAIAYGLDK 620
PAYFNDSQRQATKDAG I GLNVLRIINEPTAAAIAYGLD+
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDR 185
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 239 bits (585), Expect = 3e-64
Identities = 127/201 (63%), Positives = 146/201 (72%), Gaps = 3/201 (1%)
Frame = +2
Query: 74 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 254 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 433
TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 434 KMKETAEAYLGKTVQNAVITVPRVLQ*LSKTSHKRCRYHLWLE--RSPNHQ*TDCCCDCL 607
KM+E+AEA+LG V +AV+TVP + + K L R N L
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 608 -RS*QKGTGKRNVLIFDLGGG 667
RS Q T NVLIFDLGGG
Sbjct: 184 DRSNQHET---NVLIFDLGGG 201
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +3
Query: 498 PAYFNDSQRQATKDAGTIXGLNVLRIINEPTAAAIAYGLDK 620
PAYFNDSQRQATKDAG I GLNVLRIINEPTAAAIAYGLD+
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDR 185
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 214 bits (523), Expect = 9e-57
Identities = 112/200 (56%), Positives = 135/200 (67%), Gaps = 2/200 (1%)
Frame = +2
Query: 74 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 254 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 433
T+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 434 KMKETAEAYLGKTVQNAVITVPRVLQ*LSKTSHKRCRYHLWLE--RSPNHQ*TDCCCDCL 607
KMKE +EA L K V+ AVITVP + + K L R N L
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 608 RS*QKGTGKRNVLIFDLGGG 667
+ K +NVLIFDLGGG
Sbjct: 188 DA--KSDKPKNVLIFDLGGG 205
Score = 77.0 bits (181), Expect = 2e-15
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +3
Query: 498 PAYFNDSQRQATKDAGTIXGLNVLRIINEPTAAAIAYGLDKR 623
PAYF+DSQR ATKDAG I GLNVLRIINEPTAAAIAYGLD +
Sbjct: 149 PAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAK 190
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 202 bits (494), Expect = 3e-53
Identities = 102/199 (51%), Positives = 136/199 (68%), Gaps = 2/199 (1%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 256
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 257 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 436
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 437 MKETAEAYLGKTVQNAVITVPRVLQ*LSKTSHKRCRYHLWLE--RSPNHQ*TDCCCDCLR 610
MK+TAEAYLGK V +AV+TVP + + K L R N L
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGL- 216
Query: 611 S*QKGTGKRNVLIFDLGGG 667
K +++++++DLGGG
Sbjct: 217 --DKTDTEKHIVVYDLGGG 233
Score = 83.0 bits (196), Expect = 4e-17
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +3
Query: 498 PAYFNDSQRQATKDAGTIXGLNVLRIINEPTAAAIAYGLDKRVLENEM 641
PAYFND+QRQATKDAGTI GLNV+RI+NEPTAAAIAYGLDK E +
Sbjct: 178 PAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDTEKHI 225
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 145 bits (352), Expect = 5e-36
Identities = 70/146 (47%), Positives = 96/146 (65%), Gaps = 1/146 (0%)
Frame = +2
Query: 65 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 241
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 242 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 421
NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DAWLEARGKTYSPSQIGG 165
Query: 422 MVLTKMKETAEAYLGKTVQNAVITVP 499
+L+KM+ETA YLGK V+NAV+TVP
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVP 191
Score = 79.0 bits (186), Expect = 6e-16
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = +3
Query: 498 PAYFNDSQRQATKDAGTIXGLNVLRIINEPTAAAIAYGLDKR 623
PAYFNDSQRQATK AG I GLNVLR++NEPTAAA+AYGLDK+
Sbjct: 191 PAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK 232
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 85.8 bits (203), Expect = 5e-18
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
Frame = +2
Query: 62 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 241
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 242 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 418
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 419 SMVLTKMKETAEAYLGKTVQNAVITVP 499
+ TK+K AEA L +V + VI++P
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIP 149
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +3
Query: 498 PAYFNDSQRQATKDAGTIXGLNVLRIINEPTAAAIAYGLDK 620
PA+F D QR+A +A I GLN LR++N+ AAA+ YG+ K
Sbjct: 149 PAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITK 189
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 66.5 bits (155), Expect = 3e-12
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 256
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 257 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGE------DKTFFPEEVS 418
+ + + L+G+ ++ T+ H+ V+ G+ K+ + + +K E S
Sbjct: 87 VTNFRDLLGKSHDELTLH--HCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144
Query: 419 SMVLTKMKETAEAYLGKTVQNAVITVP 499
L ++ E+AE +LG V V++VP
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGCVMSVP 171
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 498 PAYFNDSQRQATKDAGTIXGLNVLRIINEPTAAAIAYGLDKRVL 629
P YF D+QR+A + A GL VL++I++P A +A + VL
Sbjct: 171 PVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVL 214
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 45.6 bits (103), Expect = 7e-06
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 254 TIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMV 427
+I + K L+ E VQ +P + + + +++ +++ + EE+ +M
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144
Query: 428 LTKMKETAEAYLGKTVQNAVITVP 499
+ AE + + + V+TVP
Sbjct: 145 MEHYISLAEEMAHEKITDLVLTVP 168
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.27
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +2
Query: 182 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 361
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 362 KIKVAYKGEDKTFFPE 409
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 69 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 164
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBC1A4.06c |||mitochondrial matrix protein import
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/49 (22%), Positives = 26/49 (53%)
Frame = -3
Query: 644 VHFVFQYPFVKTVSNRSSSRFIDDSENVQAXDGTCIFCGLSLRVIEVRG 498
VHF+ +K++ +SR++ +N+ + + GL L ++++ G
Sbjct: 272 VHFIESSEVLKSMDPSDNSRYLSFHQNITKDSISRLLNGLPLNLVKILG 320
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 654 SKISTFRFPVPFCQDRKQSQQQSVH 580
SK+ F PVP D ++ QQ+ V+
Sbjct: 1343 SKVEAFSIPVPISADLRKYQQEGVN 1367
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 55 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 234
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 235 GDEPQQ 252
++P++
Sbjct: 532 -EKPEE 536
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 155 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 51
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = -2
Query: 507 STRGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKG 328
S+ + I++ T+L + S + +S+ + S +LSS + + + SL+T
Sbjct: 612 SSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---IPISSSLSTYSS 668
Query: 327 QCFMSACTVASSN 289
S+ T+ SS+
Sbjct: 669 SVIPSSSTLVSSS 681
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,910,563
Number of Sequences: 5004
Number of extensions: 61435
Number of successful extensions: 193
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -