Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2158
(410 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 120 1e-26
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 113 1e-24
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 98 5e-20
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 98 7e-20
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 75 6e-13
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 71 7e-12
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 71 1e-11
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 70 2e-11
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 57 2e-07
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 55 6e-07
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 50 2e-05
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 48 6e-05
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 40 0.026
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 38 0.11
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 35 0.74
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 35 0.74
UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n... 35 0.74
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 34 0.98
UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n... 34 0.98
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 34 1.3
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 33 1.7
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 33 1.7
UniRef50_Q7TD13 Cluster: Putative movement protein; n=1; Cestrum... 32 4.0
UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellula... 32 4.0
UniRef50_Q5KKX3 Cluster: Fermentation-related protein, putative;... 32 4.0
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 32 4.0
UniRef50_UPI0000F2DB05 Cluster: PREDICTED: hypothetical protein;... 32 5.2
UniRef50_Q8Y6R7 Cluster: Lmo1616 protein; n=13; Listeria|Rep: Lm... 32 5.2
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 32 5.2
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 32 5.2
UniRef50_UPI00006CF9AE Cluster: hypothetical protein TTHERM_0042... 31 6.9
UniRef50_Q82VJ7 Cluster: Putative transmembrane sensor; n=1; Nit... 31 6.9
UniRef50_Q12M26 Cluster: FMN-binding precursor; n=7; Gammaproteo... 31 6.9
UniRef50_A6PN45 Cluster: Glycoside hydrolase family 2, sugar bin... 31 6.9
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 31 6.9
UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellul... 31 6.9
UniRef50_Q8U5K5 Cluster: AGR_C_812p; n=1; Agrobacterium tumefaci... 31 9.1
UniRef50_Q0YV14 Cluster: Putative uncharacterized protein; n=1; ... 31 9.1
UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:... 31 9.1
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 31 9.1
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 120 bits (289), Expect = 1e-26
Identities = 57/90 (63%), Positives = 69/90 (76%)
Frame = +1
Query: 124 LSPDCCSTNFQEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVD 303
+ P EP+LLLGKE+F+ VDIRV VKGGGHV Q+YAIRQ+ISKAL+A+YQKYVD
Sbjct: 42 IEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVD 101
Query: 304 EASKKEIKDILVQYDRSFAGG*PASLXAQK 393
EASKKEIKDIL+QYDR+ P ++K
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKK 131
Score = 41.5 bits (93), Expect = 0.006
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Frame = +2
Query: 11 PFQXVQXFGX*KTRXRSCGIGKRGHGWLRVXGRPLDLG*AQTAAVQTFRNLSFCSARKNS 190
P Q VQ FG KT KRG+G ++V GRPL++ +T + + +
Sbjct: 6 PLQSVQVFGRKKTATAVAHC-KRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKER-- 62
Query: 191 LWLTSE*QSRVVVMXHK---FTLSDKLFQRL*SPSTRNM*TKPQRRKSKTS*XNTIGVLL 361
+ + + RV H + + + + L + + + + +++ K LL
Sbjct: 63 -FAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYV-DEASKKEIKDILIQYDRTLL 120
Query: 362 VADPRXCXPKKFGGPG 409
VADPR C KKFGGPG
Sbjct: 121 VADPRRCESKKFGGPG 136
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 113 bits (272), Expect = 1e-24
Identities = 52/66 (78%), Positives = 61/66 (92%)
Frame = +1
Query: 157 EPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 336
EPILLLGKE+F+ VDIR+ VKGGG+V Q+YAIRQAISKAL+A+YQKYVDE SKKEIKD L
Sbjct: 55 EPILLLGKERFAGVDIRIRVKGGGNVAQIYAIRQAISKALVAYYQKYVDEQSKKEIKDTL 114
Query: 337 VQYDRS 354
+QYDR+
Sbjct: 115 IQYDRT 120
Score = 39.9 bits (89), Expect = 0.020
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 356 LLVADPRXCXPKKFGGPG 409
LLVADPR C PKKFGGPG
Sbjct: 121 LLVADPRRCEPKKFGGPG 138
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 98.3 bits (234), Expect = 5e-20
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = +1
Query: 106 APIGLGLSPDCCSTNFQEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAF 285
+PI L + P+ EP+LL+G +KFS +DIRV V GGGHV QVYAIRQAI+K L+A+
Sbjct: 34 SPITL-VEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAY 92
Query: 286 YQKYVDEASKKEIKDILVQYDRS 354
+QKYVDE SK E+K YDR+
Sbjct: 93 HQKYVDEQSKNELKKAFTSYDRT 115
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 97.9 bits (233), Expect = 7e-20
Identities = 43/66 (65%), Positives = 55/66 (83%)
Frame = +1
Query: 157 EPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 336
EP+L++G +KF+ VDIRV V GGGH QVYAIRQAI+K+L+A+YQKYVDE SK ++K
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAKSLVAYYQKYVDEHSKNQLKQAF 121
Query: 337 VQYDRS 354
VQYDR+
Sbjct: 122 VQYDRT 127
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 74.9 bits (176), Expect = 6e-13
Identities = 38/95 (40%), Positives = 58/95 (61%)
Frame = +1
Query: 109 PIGLGLSPDCCSTNFQEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFY 288
P+ L + P+ T EPI++LG+ F +D+ + V GGGHV Q+YA+RQAIS+ ++A
Sbjct: 53 PLAL-VRPEILRTKVSEPIMILGESLFKGLDMNIKVAGGGHVSQIYAVRQAISRGVLASV 111
Query: 289 QKYVDEASKKEIKDILVQYDRSFAGG*PASLXAQK 393
+ DEA++ E++ LV YDR P A+K
Sbjct: 112 K---DEAARSELRAKLVSYDRQLVVSDPRRCEAKK 143
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 71.3 bits (167), Expect = 7e-12
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +1
Query: 130 PDCCSTNFQEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEA 309
PD E I ++G + +S + I V V GGG V Q YA RQAI+K LIAF+QKY +E
Sbjct: 47 PDTLRAKIMEAITVVGSKYYSRLRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEV 106
Query: 310 SKKEIKDILVQYDR 351
K +KD + YD+
Sbjct: 107 EKAALKDKFLAYDK 120
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 70.5 bits (165), Expect = 1e-11
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +1
Query: 166 LLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 342
LLL KE+ + +DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 67 LLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 69.7 bits (163), Expect = 2e-11
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +1
Query: 190 SMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 354
S VDIR+ V GGG Q+YAIRQAI+K+L+A+Y KY D AS E++ + V YDR+
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRT 171
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 56.8 bits (131), Expect = 2e-07
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +1
Query: 109 PIGLGLSPDCCSTNFQEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFY 288
PI L + P EP +LG + ++ + KGGG V Q+YAIRQ+ISK L+ +Y
Sbjct: 31 PINL-VHPLDIKNKILEPFFILGSNERLNLNFDIFSKGGGKVSQIYAIRQSISKCLVFYY 89
Query: 289 QKYVDEASKKEIKDILVQYDR 351
KY+ + +K + YD+
Sbjct: 90 YKYISASKSNLLKIKYLTYDK 110
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 54.8 bits (126), Expect = 6e-07
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1
Query: 154 QEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKKEIKDI 333
+E I ++ + + +T K GG V +VYA+R A +KA++AFY Y DE K+EI+
Sbjct: 51 KEIICIVEQANIKDLSFDITCKIGGDVSRVYAVRMAFAKAILAFYGTYFDEWKKQEIQKR 110
Query: 334 LVQYDR 351
L+ +DR
Sbjct: 111 LLDFDR 116
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 49.6 bits (113), Expect = 2e-05
Identities = 30/93 (32%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Frame = +1
Query: 157 EPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQ---------KYVDEA 309
EP+L+ G+ S+VDIRV V+GGG + Q A+R AI++ L+ F++ + +D+
Sbjct: 50 EPLLIAGEGVRSLVDIRVRVEGGGVMGQADAVRMAIARGLVEFFRCEESDDELCRMMDKI 109
Query: 310 SKKEIKDILVQYDRSFAGG*PASLXAQK-VRWS 405
S ++++ +++DR+ G P +K +R+S
Sbjct: 110 S-RDLRTAFLEHDRTMLVGDPRRTEPEKYMRYS 141
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 48.4 bits (110), Expect = 6e-05
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +1
Query: 124 LSPDCCSTNFQEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVD 303
+ P+ EP++L G+E ++ VDI V V+GGG + Q A R AI++AL V+
Sbjct: 36 IEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARAL-------VE 88
Query: 304 EASKKEIKDILVQYDRSFAGG*P 372
+K+ ++YDR+ G P
Sbjct: 89 WTGDMNLKEKFIKYDRTMLVGDP 111
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 39.5 bits (88), Expect = 0.026
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 157 EPILLLGKEKFSMVDIRVTVKGGGHVXQVYAI 252
+PIL LGKE+F+ V I V V G G V Q+YAI
Sbjct: 71 DPILPLGKERFARVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 37.5 bits (83), Expect = 0.11
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 148 NFQEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKY 297
+ ++P++ G EK DI VTVKGGG Q A R I++AL+ + Y
Sbjct: 48 DLEQPLVATGTEKD--FDITVTVKGGGFTGQAGATRLGIARALLVASEDY 95
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 34.7 bits (76), Expect = 0.74
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 199 DIRVTVKGGGHVXQVYAIRQAISKALIAFYQKY 297
DIRVTV+GGG Q AIR I++AL+ Y
Sbjct: 68 DIRVTVRGGGLAGQAGAIRLGIARALLEISADY 100
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 34.7 bits (76), Expect = 0.74
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 154 QEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKY 297
++P++ G E D+RV V GGG Q AIR I++AL+ +Y
Sbjct: 49 KQPLVETGTE--GQYDVRVNVDGGGFTGQAGAIRHGIARALLQVDPEY 94
>UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlamydomonas reinhardtii|Rep: Chloroplast 30S ribosomal
protein S9 - Chlamydomonas reinhardtii
Length = 191
Score = 34.7 bits (76), Expect = 0.74
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 124 LSPDCCSTNFQEPILLL----GKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQ 291
+SPD TN + L G E D V VKGGG + Q AIR IS+AL
Sbjct: 64 VSPDLSLTNLESTFTNLMQFSGGENAVKFDTIVKVKGGGLMGQTEAIRLGISRALCLLST 123
Query: 292 KYVDEASKKEIKDILV 339
A++ + +I +
Sbjct: 124 NTNPSANQNNLPNIYI 139
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 34.3 bits (75), Expect = 0.98
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 133 DCCSTNFQEPILLL-GKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKAL 276
D T ++PI+ + EKF DIR V GGG Q A+R AI++AL
Sbjct: 46 DVLQTIVKQPIVAVDANEKF---DIRANVTGGGVAGQAEALRHAIARAL 91
>UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlorella vulgaris|Rep: Chloroplast 30S ribosomal
protein S9 - Chlorella vulgaris (Green alga)
Length = 137
Score = 34.3 bits (75), Expect = 0.98
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 199 DIRVTVKGGGHVXQVYAIRQAISKALIAFYQKY 297
D+ + V+GGG Q A++ A+SKA + F+ +Y
Sbjct: 69 DVHILVEGGGLSAQAQAVKLALSKAFVDFFPEY 101
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 33.9 bits (74), Expect = 1.3
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 160 PILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKY 297
P++L+ +E DI V V GGG Q AI+ ISKAL+ + ++
Sbjct: 53 PLMLVKQE--GNFDIEVKVLGGGFAAQADAIKHGISKALVEYAPEF 96
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 33.5 bits (73), Expect = 1.7
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 199 DIRVTVKGGGHVXQVYAIRQAISKALIAF 285
D+R +V GGGH Q A+ I+KALI F
Sbjct: 81 DVRCSVAGGGHTGQAGAMVHGIAKALILF 109
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 33.5 bits (73), Expect = 1.7
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +1
Query: 199 DIRVTVKGGGHVXQVYAIRQAISKALIAF 285
DI V VKGGG Q AIR I +ALI F
Sbjct: 64 DINVVVKGGGFTGQAGAIRLGIVRALIKF 92
>UniRef50_Q7TD13 Cluster: Putative movement protein; n=1; Cestrum
yellow leaf curling virus|Rep: Putative movement protein
- Cestrum yellow leaf curling virus
Length = 312
Score = 32.3 bits (70), Expect = 4.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 166 LLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKK 318
+L K+KF + +T+K G ++ IR + + FY KY+ E+ K
Sbjct: 20 VLSEKDKFKIESADITLKEGDDFKRISTIRNIFDRKNVIFYGKYLSESFVK 70
>UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellular
organisms|Rep: 30S ribosomal protein S9 - Mesorhizobium
sp. (strain BNC1)
Length = 160
Score = 32.3 bits (70), Expect = 4.0
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 154 QEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKK 318
Q+PI+ + DI TV GGG Q A+R IS+AL FY+ + KK
Sbjct: 79 QQPIVATNRN--GQYDIVATVVGGGLSGQAGAVRHGISRAL-TFYEPELRAVLKK 130
>UniRef50_Q5KKX3 Cluster: Fermentation-related protein, putative; n=2;
Filobasidiella neoformans|Rep: Fermentation-related
protein, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 2933
Score = 32.3 bits (70), Expect = 4.0
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 QAWSWMAACXRAPIGLGLSPDCCSTNFQEPILL-LGKEKFSMVDIRVTVKGGGHVXQVYA 249
+AW A C + L LSPD Q L GKEK + V+ + V+ GH + A
Sbjct: 2224 EAWHLSAHCSASDFKLTLSPDISDDVIQLVELFERGKEKIAKVEAQYKVEVAGHAKETIA 2283
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 32.3 bits (70), Expect = 4.0
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 154 QEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAF 285
++P++ L + S D+ TV+GGG Q AIR I++ALI +
Sbjct: 52 RQPLVKLDVQ--SRFDVYATVQGGGDSGQAGAIRHGITRALIQY 93
>UniRef50_UPI0000F2DB05 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 266
Score = 31.9 bits (69), Expect = 5.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 108 AHWTWVEPRLLQYKLSGTYPFARQGKILYG*HQSDSQGWWSCXT 239
A W W EP ++ L A Q + LYG ++ + +W C T
Sbjct: 73 AEWNWCEPTIIIVSLKELSRLAGQIRRLYGSNKKATTPFWICLT 116
>UniRef50_Q8Y6R7 Cluster: Lmo1616 protein; n=13; Listeria|Rep:
Lmo1616 protein - Listeria monocytogenes
Length = 260
Score = 31.9 bits (69), Expect = 5.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 213 CHSDVNHREFFLAEQKDRFLKVCTAAVWAQPKSN 112
CH DVNH + ++E+ + FL A+ A P ++
Sbjct: 157 CHGDVNHNNWIISEENELFLVDWDGAMLADPAND 190
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 31.9 bits (69), Expect = 5.2
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 154 QEPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALI 279
++P+ LL + DI TVKGGG Q AIR I++ALI
Sbjct: 47 RQPLELL--DSAETYDIYATVKGGGINGQAGAIRHGITRALI 86
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 31.9 bits (69), Expect = 5.2
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 199 DIRVTVKGGGHVXQVYAIRQAISKALIAF 285
D+ TV GGG Q AIR A++KAL +F
Sbjct: 327 DVTCTVSGGGRSAQAGAIRLAMAKALCSF 355
>UniRef50_UPI00006CF9AE Cluster: hypothetical protein
TTHERM_00420090; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00420090 - Tetrahymena
thermophila SB210
Length = 1094
Score = 31.5 bits (68), Expect = 6.9
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 205 RVTVKGGGHVXQVYAIRQAISKALIAFY-QKYVDEASKKEIKDILVQ 342
++T +GG + QVY + Q + I Y KY+ E ++ IK I+++
Sbjct: 466 KITAEGGNTIQQVYRLAQIKGRYHIQLYGNKYLAEQGQQSIKAIVLE 512
>UniRef50_Q82VJ7 Cluster: Putative transmembrane sensor; n=1;
Nitrosomonas europaea|Rep: Putative transmembrane sensor
- Nitrosomonas europaea
Length = 337
Score = 31.5 bits (68), Expect = 6.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 114 WTWVEPRLLQYKLSGTYPFARQGKIL 191
W +P + Q K++GTYP A GKIL
Sbjct: 284 WLSCDPAVAQLKVTGTYPLADIGKIL 309
>UniRef50_Q12M26 Cluster: FMN-binding precursor; n=7;
Gammaproteobacteria|Rep: FMN-binding precursor -
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 /
DSM 15013)
Length = 716
Score = 31.5 bits (68), Expect = 6.9
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +1
Query: 157 EPILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 336
+P+ + + F+ D + T+ G G + ++Y R + A + ++VDEAS + +D+
Sbjct: 199 QPLSTIKPDVFAKADWQ-TLTGDGSIRKLYLKRAVVDDAFMGTEAEHVDEASASQKQDMF 257
Query: 337 VQ 342
+
Sbjct: 258 AE 259
>UniRef50_A6PN45 Cluster: Glycoside hydrolase family 2, sugar
binding precursor; n=1; Victivallis vadensis ATCC
BAA-548|Rep: Glycoside hydrolase family 2, sugar binding
precursor - Victivallis vadensis ATCC BAA-548
Length = 1369
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 222 WWSCXTSLRYQTSYFKGSDRLLPE 293
WW+C + Y SYFKG LL E
Sbjct: 565 WWACEFAAVYDGSYFKGKQFLLTE 588
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 31.5 bits (68), Expect = 6.9
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 169 LLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEAS 312
L E F VD+ V V GGG Q AI I++AL A+ ++ + S
Sbjct: 123 LKATETFGKVDVWVRVTGGGTTGQTGAIVLGIARALEAYNNQFHETLS 170
>UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellular
organisms|Rep: 30S ribosomal protein S9 - Rhizobium loti
(Mesorhizobium loti)
Length = 160
Score = 31.5 bits (68), Expect = 6.9
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 169 LLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKK 318
++ + DI TV GGG Q A+R ISKAL +Y+ + KK
Sbjct: 82 IIASNRSGQYDIVATVVGGGLSGQAGAVRHGISKAL-TYYEPALRAVLKK 130
>UniRef50_Q8U5K5 Cluster: AGR_C_812p; n=1; Agrobacterium tumefaciens
str. C58|Rep: AGR_C_812p - Agrobacterium tumefaciens
(strain C58 / ATCC 33970)
Length = 733
Score = 31.1 bits (67), Expect = 9.1
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 163 ILLLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDE 306
I +G E+F +VDIR G GH Q Y +RQ ++ Y +YV E
Sbjct: 373 IFNIGGEEFQIVDIRAN-GGPGH--QTYGVRQIRYESYNEVYWEYVTE 417
>UniRef50_Q0YV14 Cluster: Putative uncharacterized protein; n=1;
Chlorobium ferrooxidans DSM 13031|Rep: Putative
uncharacterized protein - Chlorobium ferrooxidans DSM
13031
Length = 271
Score = 31.1 bits (67), Expect = 9.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 292 KYVDEASKKEIKDILVQYDRSFAGG*PASL 381
K+ +SKK + DI+ +RSF GG P SL
Sbjct: 157 KFRGASSKKAVTDIIESLERSFRGGLPVSL 186
>UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:
ENSANGP00000014497 - Anopheles gambiae str. PEST
Length = 84
Score = 31.1 bits (67), Expect = 9.1
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 169 LLGKEKFSMVDIRVTVKGGGHVXQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYD 348
LL + + +D+ V GGG Q A+R I+ AL +F + D+ ++ + +L +
Sbjct: 5 LLFTKMYGKIDVTANVSGGGPSSQAGAVRWGIAMALRSFVDE--DQIARMRVAGLLTRDY 62
Query: 349 RSFAGG*PASLXA-QKVRWSR 408
R P A +K W +
Sbjct: 63 RRRERKKPGQAGARRKYTWKK 83
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 31.1 bits (67), Expect = 9.1
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 196 VDIRVTVKGGGHVXQVYAIRQAISKALIAF 285
VDI V VKGGG + Q A IS+ALI +
Sbjct: 62 VDISVRVKGGGFMGQAGASATGISRALIGW 91
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,171,615
Number of Sequences: 1657284
Number of extensions: 6523891
Number of successful extensions: 14879
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 14614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14875
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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