Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2154
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated... 33 0.19
AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type chlo... 33 0.19
AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical ... 29 4.1
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 7.1
U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical pr... 27 9.4
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 27 9.4
U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division c... 27 9.4
U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division c... 27 9.4
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 27 9.4
AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14 phosph... 27 9.4
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 27 9.4
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 27 9.4
AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14 phosph... 27 9.4
AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein sp... 27 9.4
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 27 9.4
>Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical
protein R07B7.1 protein.
Length = 796
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 242 EISRDGSVQVLATDYN--NYAIAYNCKYDD--KKKSHQVFVWILSKNK 373
++ R S + L+ Y NY I+ N Y D KK SHQ+ +W +S+N+
Sbjct: 55 DVGRTDSHEALSARYESLNYEISENRLYRDAEKKPSHQLTLWRISRNR 102
>AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated
chloride channelCLH-6 protein.
Length = 796
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 242 EISRDGSVQVLATDYN--NYAIAYNCKYDD--KKKSHQVFVWILSKNK 373
++ R S + L+ Y NY I+ N Y D KK SHQ+ +W +S+N+
Sbjct: 55 DVGRTDSHEALSARYESLNYEISENRLYRDAEKKPSHQLTLWRISRNR 102
>AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type
chloride channel CLH-6 protein.
Length = 796
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 242 EISRDGSVQVLATDYN--NYAIAYNCKYDD--KKKSHQVFVWILSKNK 373
++ R S + L+ Y NY I+ N Y D KK SHQ+ +W +S+N+
Sbjct: 55 DVGRTDSHEALSARYESLNYEISENRLYRDAEKKPSHQLTLWRISRNR 102
>AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical
protein Y57A10A.4 protein.
Length = 629
Score = 28.7 bits (61), Expect = 4.1
Identities = 26/89 (29%), Positives = 40/89 (44%)
Frame = +2
Query: 227 LFKFGEISRDGSVQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSKNKKLEGDAKTAVD 406
L +F E DG + Y +YA +N + K + I + + + G A D
Sbjct: 32 LTEFSESENDG-----LSHYAHYAKFHNYLVPNMAKLAEYS--IEERVRVIFGFAAVVSD 84
Query: 407 NFIKEHSKEIDSSKLVHTDFSEEACKFTS 493
+F+K+ +E LVH D + CKFTS
Sbjct: 85 DFLKQIQRE----GLVHLDKKKRICKFTS 109
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 147 HRRRQEVYRRDGQAHRRRQ*SRKANSHFLSLEKYHAMDQFKSWRLT 284
HRRR E +RR + H RRQ ++ + L HA Q +S +T
Sbjct: 711 HRRRLEEHRRREEEHHRRQ-EEESRARALQQSLLHA-SQVESTEVT 754
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 147 HRRRQEVYRRDGQAHRRRQ*SRKANSHFLSLEKYHAMDQFKSWRLT 284
HRRR E +RR + H RRQ ++ + L HA Q +S +T
Sbjct: 711 HRRRLEEHRRREEEHHRRQ-EEESRARALQQSLLHA-SQVESTEVT 754
>U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical
protein C31H1.8 protein.
Length = 567
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 326 KKKSHQVFVWILSKNKKLEGDAKTAVDNFIKEHSK 430
K S V+ + S+N+KLE + A+D+F++ SK
Sbjct: 240 KMHSDYVYAIVHSRNEKLERRLRGAIDSFMEIESK 274
>Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical
protein B0464.5c protein.
Length = 774
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 173 KGRPSSPTTPIKPQS*Q--SLFKFGEISRDGSVQVLATDYN 289
K +P++P TP PQ+ + + K G ++ +GS V T+ N
Sbjct: 23 KKKPTAPNTPTSPQAGEKNANLKNGTVTTNGSNHVERTEVN 63
>Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical
protein B0464.5b protein.
Length = 698
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 173 KGRPSSPTTPIKPQS*Q--SLFKFGEISRDGSVQVLATDYN 289
K +P++P TP PQ+ + + K G ++ +GS V T+ N
Sbjct: 23 KKKPTAPNTPTSPQAGEKNANLKNGTVTTNGSNHVERTEVN 63
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 95 SXNTNWKVTW*RSRXCISSTASRSI*KGRPSSPTTPIKPQS 217
S NT +T + S ASR R SPTTPIKP S
Sbjct: 531 SGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTPIKPMS 571
>U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division
cycle related protein14, isoform d protein.
Length = 695
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 95 SXNTNWKVTW*RSRXCISSTASRSI*KGRPSSPTTPIKPQS 217
S NT +T + S ASR R SPTTPIKP S
Sbjct: 531 SGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTPIKPMS 571
>U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division
cycle related protein14, isoform a protein.
Length = 693
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 95 SXNTNWKVTW*RSRXCISSTASRSI*KGRPSSPTTPIKPQS 217
S NT +T + S ASR R SPTTPIKP S
Sbjct: 531 SGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTPIKPMS 571
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 95 SXNTNWKVTW*RSRXCISSTASRSI*KGRPSSPTTPIKPQS 217
S NT +T + S ASR R SPTTPIKP S
Sbjct: 531 SGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTPIKPMS 571
>AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14
phosphatase isoform D protein.
Length = 695
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 95 SXNTNWKVTW*RSRXCISSTASRSI*KGRPSSPTTPIKPQS 217
S NT +T + S ASR R SPTTPIKP S
Sbjct: 531 SGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTPIKPMS 571
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 95 SXNTNWKVTW*RSRXCISSTASRSI*KGRPSSPTTPIKPQS 217
S NT +T + S ASR R SPTTPIKP S
Sbjct: 531 SGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTPIKPMS 571
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 95 SXNTNWKVTW*RSRXCISSTASRSI*KGRPSSPTTPIKPQS 217
S NT +T + S ASR R SPTTPIKP S
Sbjct: 531 SGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTPIKPMS 571
>AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14
phosphatase isoform A protein.
Length = 693
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 95 SXNTNWKVTW*RSRXCISSTASRSI*KGRPSSPTTPIKPQS 217
S NT +T + S ASR R SPTTPIKP S
Sbjct: 531 SGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTPIKPMS 571
>AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein
specfic kinase SPK-1 protein.
Length = 698
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 173 KGRPSSPTTPIKPQS*Q--SLFKFGEISRDGSVQVLATDYN 289
K +P++P TP PQ+ + + K G ++ +GS V T+ N
Sbjct: 23 KKKPTAPNTPTSPQAGEKNANLKNGTVTTNGSNHVERTEVN 63
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +2
Query: 95 SXNTNWKVTW*RSRXCISSTASRSI*KGRPSSPTTPIKPQS 217
S NT +T + S ASR R SPTTPIKP S
Sbjct: 531 SGNTTSTLTRTPASAVFPSMASRRSETTRYLSPTTPIKPMS 571
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,197,016
Number of Sequences: 27780
Number of extensions: 233106
Number of successful extensions: 765
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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