Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2151
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D31888-1|BAA06686.1|  396|Homo sapiens KIAA0071 protein.               35   0.24 
BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        35   0.24 
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        35   0.24 
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       35   0.24 
BC151227-1|AAI51228.1| 1606|Homo sapiens HECT, C2 and WW domain ...    31   3.8  
AK056313-1|BAB71146.1|  618|Homo sapiens protein ( Homo sapiens ...    31   3.8  
AB126073-1|BAD20200.1|  288|Homo sapiens keratin associated prot...    31   3.8  
AB048365-1|BAB13352.1| 1585|Homo sapiens NEDD4-like ubiquitin li...    31   3.8  
AB002320-1|BAA20780.2| 1614|Homo sapiens KIAA0322 protein.             31   3.8  
BC041388-1|AAH41388.1|  618|Homo sapiens zinc finger protein 553...    31   5.1  
AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-l...    30   6.7  
AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase p...    30   6.7  
AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase p...    30   6.7  
AC072061-1|AAS07491.1|  784|Homo sapiens unknown protein.              30   6.7  
BC103846-1|AAI03847.1|  127|Homo sapiens keratin associated prot...    30   8.9  
BC103845-1|AAI03846.1|  127|Homo sapiens keratin associated prot...    30   8.9  
AJ406942-1|CAC27581.1|  127|Homo sapiens keratin associated prot...    30   8.9  

>D31888-1|BAA06686.1|  396|Homo sapiens KIAA0071 protein.
          Length = 396

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -3

Query: 441 SWR-TGTCSPFCDIHSREKKDYRSSRNHGLVYANSNYTLTNHIGGNRDEPRAVPPGRTDP 265
           SW+ T T +   D H+R++K  R      L  AN N  +   +  N++  + VPP  T P
Sbjct: 146 SWKKTRTKTSVMDRHARKQKREREESEDELEEANGNNPIDIEVDQNKESKKEVPPTETVP 205

Query: 264 GI 259
            +
Sbjct: 206 QV 207


>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -3

Query: 441 SWR-TGTCSPFCDIHSREKKDYRSSRNHGLVYANSNYTLTNHIGGNRDEPRAVPPGRTDP 265
           SW+ T T +   D H+R++K  R      L  AN N  +   +  N++  + VPP  T P
Sbjct: 232 SWKKTRTKTSVMDRHARKQKREREESEDELEEANGNNPIDIEVDQNKESKKEVPPTETVP 291

Query: 264 GI 259
            +
Sbjct: 292 QV 293


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -3

Query: 441 SWR-TGTCSPFCDIHSREKKDYRSSRNHGLVYANSNYTLTNHIGGNRDEPRAVPPGRTDP 265
           SW+ T T +   D H+R++K  R      L  AN N  +   +  N++  + VPP  T P
Sbjct: 232 SWKKTRTKTSVMDRHARKQKREREESEDELEEANGNNPIDIEVDQNKESKKEVPPTETVP 291

Query: 264 GI 259
            +
Sbjct: 292 QV 293


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -3

Query: 441 SWR-TGTCSPFCDIHSREKKDYRSSRNHGLVYANSNYTLTNHIGGNRDEPRAVPPGRTDP 265
           SW+ T T +   D H+R++K  R      L  AN N  +   +  N++  + VPP  T P
Sbjct: 232 SWKKTRTKTSVMDRHARKQKREREESEDELEEANGNNPIDIEVDQNKESKKEVPPTETVP 291

Query: 264 GI 259
            +
Sbjct: 292 QV 293


>BC151227-1|AAI51228.1| 1606|Homo sapiens HECT, C2 and WW domain
           containing E3 ubiquitin protein ligase 1 protein.
          Length = 1606

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 2/145 (1%)
 Frame = -3

Query: 588 RIQSKQMXQMVKLKCSIMLRLMEPRQACPRNXXEDPXSSSWRSTDILHK--SWRTGTCSP 415
           R+Q +   +     CS+ +  +E   A      E P +   R   +LH   S + G+ + 
Sbjct: 521 RLQLRASVKRKSRPCSLPVSELETVIASACGDPETPRTHYIRIHTLLHSMPSAQGGSAAE 580

Query: 414 FCDIHSREKKDYRSSRNHGLVYANSNYTLTNHIGGNRDEPRAVPPGRTDPGIPDRSDIPL 235
             D    E     SS   GL   ++     + +  +R+EP    PG   PG       P 
Sbjct: 581 EEDGAEEESTLKDSSEKDGLSEVDTVAADPSALEEDREEPEGATPGTAHPG-HSGGHFPS 639

Query: 234 DLAGSCSDNCPDTAQGSSSRSQHRR 160
              G+  D     + GS S S  R+
Sbjct: 640 LANGAAQDGDTHPSTGSESDSSPRQ 664


>AK056313-1|BAB71146.1|  618|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31751 fis, clone NT2RI2007439, weakly similar to
           ZINC FINGER PROTEIN 84. ).
          Length = 618

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = -3

Query: 330 LTNHIGGNRDEPRAVPPGRTDPGIPDRSDIPLDLAGSCSDNCPDTAQG---SSSRSQHRR 160
           LT     +  EP  +P    +PG P   + P  LAG     CP+  +G   SS   +H R
Sbjct: 412 LTPRSPSHSGEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHKCPECGKGFRRSSDLVKHHR 471


>AB126073-1|BAD20200.1|  288|Homo sapiens keratin associated protein
           protein.
          Length = 288

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
 Frame = +3

Query: 318 CDSSVYSYCSRKQAHDSCCCDNPSFPGYGCRKTDCKFLYANS-CEEYQLISNCCXVDLXX 494
           C SS    C       S CC +     Y C+ + CK   ++S C      S+CC      
Sbjct: 216 CQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCSQ 275

Query: 495 NSVDTPV 515
           +S   PV
Sbjct: 276 SSCCVPV 282


>AB048365-1|BAB13352.1| 1585|Homo sapiens NEDD4-like ubiquitin
           ligase 1 protein.
          Length = 1585

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 2/145 (1%)
 Frame = -3

Query: 588 RIQSKQMXQMVKLKCSIMLRLMEPRQACPRNXXEDPXSSSWRSTDILHK--SWRTGTCSP 415
           R+Q +   +     CS+ +  +E   A      E P +   R   +LH   S + G+ + 
Sbjct: 500 RLQLRASVKRKSRPCSLPVSELETVIASACGDPETPRTHYIRIHTLLHSMPSAQGGSAAE 559

Query: 414 FCDIHSREKKDYRSSRNHGLVYANSNYTLTNHIGGNRDEPRAVPPGRTDPGIPDRSDIPL 235
             D    E     SS   GL   ++     + +  +R+EP    PG   PG       P 
Sbjct: 560 EEDGAEEESTLKDSSEKDGLSEVDTVAADPSALEEDREEPEGATPGTAHPG-HSGGHFPS 618

Query: 234 DLAGSCSDNCPDTAQGSSSRSQHRR 160
              G+  D     + GS S S  R+
Sbjct: 619 LANGAAQDGDTHPSTGSESDSSPRQ 643


>AB002320-1|BAA20780.2| 1614|Homo sapiens KIAA0322 protein.
          Length = 1614

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 2/145 (1%)
 Frame = -3

Query: 588 RIQSKQMXQMVKLKCSIMLRLMEPRQACPRNXXEDPXSSSWRSTDILHK--SWRTGTCSP 415
           R+Q +   +     CS+ +  +E   A      E P +   R   +LH   S + G+ + 
Sbjct: 529 RLQLRASVKRKSRPCSLPVSELETVIASACGDPETPRTHYIRIHTLLHSMPSAQGGSAAE 588

Query: 414 FCDIHSREKKDYRSSRNHGLVYANSNYTLTNHIGGNRDEPRAVPPGRTDPGIPDRSDIPL 235
             D    E     SS   GL   ++     + +  +R+EP    PG   PG       P 
Sbjct: 589 EEDGAEEESTLKDSSEKDGLSEVDTVAADPSALEEDREEPEGATPGTAHPG-HSGGHFPS 647

Query: 234 DLAGSCSDNCPDTAQGSSSRSQHRR 160
              G+  D     + GS S S  R+
Sbjct: 648 LANGAAQDGDTHPSTGSESDSSPRQ 672


>BC041388-1|AAH41388.1|  618|Homo sapiens zinc finger protein 553
           protein.
          Length = 618

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = -3

Query: 330 LTNHIGGNRDEPRAVPPGRTDPGIPDRSDIPLDLAGSCSDNCPDTAQG---SSSRSQHRR 160
           LT     +  EP  +P    +PG P   + P  LAG     CP+  +G   SS   +H R
Sbjct: 412 LTPRSPSHSGEPFGLPGLEPEPGGPQAGEPPPPLAGDKPRKCPECGKGFRRSSDLVKHHR 471


>AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-like
           5 (cholinesterase-related cell division controller)
           protein.
          Length = 1512

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = -3

Query: 477 SSSWRST-----DILHKSWRTGTCSPFCDIHSREKKDYRSSRNHGLVYANSNYTLT 325
           SSSWR +      +L +S ++ + SP+   HSR +  +R SR+     + S  TLT
Sbjct: 389 SSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLT 444


>AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase
           protein.
          Length = 1452

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = -3

Query: 477 SSSWRST-----DILHKSWRTGTCSPFCDIHSREKKDYRSSRNHGLVYANSNYTLT 325
           SSSWR +      +L +S ++ + SP+   HSR +  +R SR+     + S  TLT
Sbjct: 389 SSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLT 444


>AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase
           protein.
          Length = 1512

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = -3

Query: 477 SSSWRST-----DILHKSWRTGTCSPFCDIHSREKKDYRSSRNHGLVYANSNYTLT 325
           SSSWR +      +L +S ++ + SP+   HSR +  +R SR+     + S  TLT
Sbjct: 389 SSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLT 444


>AC072061-1|AAS07491.1|  784|Homo sapiens unknown protein.
          Length = 784

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = -3

Query: 477 SSSWRST-----DILHKSWRTGTCSPFCDIHSREKKDYRSSRNHGLVYANSNYTLT 325
           SSSWR +      +L +S ++ + SP+   HSR +  +R SR+     + S  TLT
Sbjct: 389 SSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLT 444


>BC103846-1|AAI03847.1|  127|Homo sapiens keratin associated protein
           4-10 protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/53 (30%), Positives = 20/53 (37%)
 Frame = +3

Query: 318 CDSSVYSYCSRKQAHDSCCCDNPSFPGYGCRKTDCKFLYANSCEEYQLISNCC 476
           C S V S C R     + CC         CR   C+     SC     +S+CC
Sbjct: 36  CPSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVCCQTTCRPSCG----VSSCC 84


>BC103845-1|AAI03846.1|  127|Homo sapiens keratin associated protein
           4-10 protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/53 (30%), Positives = 20/53 (37%)
 Frame = +3

Query: 318 CDSSVYSYCSRKQAHDSCCCDNPSFPGYGCRKTDCKFLYANSCEEYQLISNCC 476
           C S V S C R     + CC         CR   C+     SC     +S+CC
Sbjct: 36  CPSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVCCQTTCRPSCG----VSSCC 84


>AJ406942-1|CAC27581.1|  127|Homo sapiens keratin associated protein
           4.10 protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 16/53 (30%), Positives = 20/53 (37%)
 Frame = +3

Query: 318 CDSSVYSYCSRKQAHDSCCCDNPSFPGYGCRKTDCKFLYANSCEEYQLISNCC 476
           C S V S C R     + CC         CR   C+     SC     +S+CC
Sbjct: 36  CPSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVCCQTTCRPSCG----VSSCC 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,646,514
Number of Sequences: 237096
Number of extensions: 1707078
Number of successful extensions: 5807
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5787
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)