Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2151
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   1.2  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   4.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   6.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.3  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   8.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.3  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 161 RRCWLRELLPWAVSGQLSEQL 223
           RR WL  LL WA+S  +   +
Sbjct: 301 RRVWLTILLVWAISAAIGSPI 321


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 417 PFCDIHSREKKDYRSSRNHGLVY 349
           P C+I  R      S RNH  +Y
Sbjct: 33  PICNICKRVYSSLNSLRNHKSIY 55


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 126 SLLNQPHNQQQMYKQVQEQIFSSPPF*CTYKILLSFVMSS 7
           SLLN  H  + +  +++  I   PP     K L+S + SS
Sbjct: 468 SLLNPSHMYRAVCGRIENTIQGLPPPYRLNKPLMSLITSS 507


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 625 FSLEYLNFXGPNANPIKTDGXNGKVKVLNYA*ING 521
           F + ++N   PN N ++    N   K L+Y  I G
Sbjct: 495 FWVSFVNNGVPNVNSVQWPRLNPNEKSLHYLHIAG 529


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +3

Query: 372 CCDNPSFPGYGCRKTDCKFLYANSCEEYQLISNC 473
           C   P  P Y CR     +L  +  + +Q+  +C
Sbjct: 43  CVPKP-IPSYACRGRCSSYLQVSGSKIWQMERSC 75


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 625 FSLEYLNFXGPNANPIKTDGXNGKVKVLNYA*ING 521
           F + ++N   PN N ++    N   K L+Y  I G
Sbjct: 495 FWVSFVNNGVPNVNSVQWPRLNPNEKSLHYLHIAG 529


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 114  QPHNQQQMYKQVQEQIFSSPP 52
            QP  QQQ  +Q Q Q  S  P
Sbjct: 1504 QPQQQQQQQQQQQPQQQSQQP 1524


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,360
Number of Sequences: 438
Number of extensions: 3318
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)