SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2149
         (630 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648...   115   4e-26
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70...   113   1e-25
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657...   113   1e-25
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046...   110   1e-24
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659           54   7e-08
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585     32   0.33 
02_05_0250 + 27153048-27154453,27154546-27154885                       31   0.57 
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766...    31   1.00 
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746...    30   1.7  
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703...    29   3.0  
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695     29   3.0  
05_06_0151 - 25999366-26000044,26004820-26005637                       29   4.0  
05_01_0297 - 2314687-2316021                                           29   4.0  
03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068           29   4.0  
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347...    28   5.3  
10_01_0357 - 3928646-3928954                                           28   7.0  
07_01_0200 + 1433859-1434377                                           28   7.0  
07_01_0196 + 1400708-1401226                                           28   7.0  
07_01_0192 + 1367558-1368076                                           28   7.0  
07_01_0188 + 1334405-1334923                                           28   7.0  
04_01_0031 + 381389-381841                                             28   7.0  
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894...    28   7.0  
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767...    27   9.3  
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206...    27   9.3  
02_01_0363 - 2612873-2613814                                           27   9.3  
02_01_0358 - 2575858-2576796                                           27   9.3  
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146...    27   9.3  

>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
            31165816-31167650,31169294-31169424,31169993-31170075,
            31170426-31170680,31171125-31171220,31171695-31171775,
            31171811-31171968,31172434-31172534,31172614-31172629,
            31173390-31173439,31174558-31174588,31175156-31175305,
            31176135-31176173,31176288-31176410,31176496-31176552,
            31176837-31176911,31177003-31177107
          Length = 1496

 Score =  115 bits (276), Expect = 4e-26
 Identities = 57/130 (43%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
 Frame = +1

Query: 85   RPCVKMVSLC*RVVHARLLKCPHPKPESTATLKFTLVGIDIFNGKKYEDICPSTHNMDVP 264
            RPC    +    +V  ++++    K       K   V IDIFNGKK EDI PS+HN DVP
Sbjct: 1361 RPCKWSGNHASLLVDTKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVP 1420

Query: 265  HVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKS 441
            HV R DYQL DIS+DG+++L+ ++G  ++DL++P D  L TQ++  F  GK+L+ TV+ +
Sbjct: 1421 HVNRTDYQLIDISEDGFVSLLTESGGTKDDLRLPSDEALLTQIKDGFAEGKDLIVTVMSA 1480

Query: 442  CGEECVIAVK 471
             GEE + A+K
Sbjct: 1481 MGEEQICALK 1490



 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 14/74 (18%)
 Frame = +3

Query: 12   MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPC-------------KIVEMS 149
            M D E+ HFE+  D+GAS T+P Q   +RKNG +++K RPC             K+VE+S
Sbjct: 1323 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVS 1382

Query: 150  TSKTGKHGHAKVHF 191
            TSKTGKHGHAK HF
Sbjct: 1383 TSKTGKHGHAKCHF 1396


>07_01_0093 +
           702223-702348,703434-703556,703646-703702,703797-703871,
           704105-704212
          Length = 162

 Score =  113 bits (272), Expect = 1e-25
 Identities = 52/99 (52%), Positives = 74/99 (74%), Gaps = 2/99 (2%)
 Frame = +1

Query: 181 KFTLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLK 360
           K   VGIDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G+ ++DL+
Sbjct: 58  KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGFVSLLTESGNTKDDLR 117

Query: 361 IP-DGDLGTQLRTDF-DSGKELLCTVLKSCGEECVIAVK 471
           +P D  L  Q++  F + GK+++ TV+ + GEE + AVK
Sbjct: 118 LPTDDTLTNQIKNGFGEEGKDMILTVMSAMGEEQICAVK 156



 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 38/61 (62%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = +3

Query: 12  MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVH 188
           M D E+ HFE+  D+GAS T+P Q   +RKNG++++K RPCK+VE+STSKTGKHGHAK H
Sbjct: 1   MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCH 60

Query: 189 F 191
           F
Sbjct: 61  F 61


>07_03_1141 -
           24264534-24264635,24265542-24265616,24265709-24265765,
           24265903-24266025,24266509-24266520,24267014-24267157,
           24267606-24267626
          Length = 177

 Score =  113 bits (271), Expect = 1e-25
 Identities = 51/98 (52%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
 Frame = +1

Query: 181 KFTLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLK 360
           K   V IDIFNGKK EDI PS+HN DVPHV R +YQL DIS+DG+++L+ ++G+ ++DL+
Sbjct: 75  KCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLLTESGNTKDDLR 134

Query: 361 IP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 471
           +P D  L  Q++T F  GK+L+ TV+ + GEE + A+K
Sbjct: 135 LPTDDSLLGQIKTGFGEGKDLVVTVMSAMGEEQICALK 172



 Score = 85.0 bits (201), Expect = 4e-17
 Identities = 38/65 (58%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
 Frame = +3

Query: 12  MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPC----KIVEMSTSKTGKHGH 176
           M D E+ HFE+  D+GAS T+P Q   +RKNG++++K RPC    K+VE+STSKTGKHGH
Sbjct: 14  MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGH 73

Query: 177 AKVHF 191
           AK HF
Sbjct: 74  AKCHF 78


>12_02_0477 +
           19503678-19503803,19504381-19504422,19504631-19504684,
           19504946-19505068,19505154-19505210,19505299-19505373,
           19505925-19506026
          Length = 192

 Score =  110 bits (264), Expect = 1e-24
 Identities = 52/126 (41%), Positives = 82/126 (65%), Gaps = 1/126 (0%)
 Frame = +1

Query: 97  KMVSLC*RVVHARLLKCPHPKPESTATLKFTLVGIDIFNGKKYEDICPSTHNMDVPHVKR 276
           ++V  C  +   ++++    K       K   V IDIF  KK EDI PS+HN DVPHV R
Sbjct: 62  ELVYSCYELYSDKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNR 121

Query: 277 EDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEE 453
            +YQL DIS+DG+++L+ +NG+ ++DL++P D +L +Q++  F  GK+L+ TV+ + GEE
Sbjct: 122 TEYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEE 181

Query: 454 CVIAVK 471
            + A+K
Sbjct: 182 QICALK 187



 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +3

Query: 12  MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK 134
           M D E+ HFE+  D+GAS T+P Q   +RKNG++++K RPCK
Sbjct: 1   MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCK 42


>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
          Length = 175

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
 Frame = +1

Query: 265 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 438
           H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P  D L  Q++T F  GK+++ TV+ 
Sbjct: 46  HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105

Query: 439 SCG 447
           + G
Sbjct: 106 AMG 108


>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
          Length = 268

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +1

Query: 52  PGPQPPSPCNVRPCVKMVSLC*RVVHARLLKCPHPKPE 165
           P PQPP PC   PC K    C +        C  PKP+
Sbjct: 81  PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117


>02_05_0250 + 27153048-27154453,27154546-27154885
          Length = 581

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = +1

Query: 328 ADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTA 483
           A  GD   DL IPD +  TQ+ T+  S     C V  S G  C  AV A+ +
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNS 298


>07_03_0434 +
           18175560-18175695,18176068-18176177,18176553-18176616,
           18176839-18176915,18177152-18177223,18178337-18178456
          Length = 192

 Score = 30.7 bits (66), Expect = 1.00
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 256 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 375
           D P+  RE +++  ++ D Y+T   D+G L ED+K+  G+
Sbjct: 38  DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75


>04_01_0576 +
           7466032-7466802,7468382-7468444,7469043-7469122,
           7469505-7469622,7470035-7470067,7470400-7470474,
           7470887-7471043,7471142-7471230,7472041-7472294,
           7472977-7473148,7473250-7473333,7473626-7473730,
           7474055-7474363,7474622-7474756,7476236-7476317,
           7476423-7476502,7476622-7476783,7477071-7477138,
           7478422-7478502,7478634-7478760,7478816-7478879,
           7480808-7480854,7481042-7481335
          Length = 1149

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 13  WVTSKTHTLRPETPGPQPPSPCNV 84
           W+T    T  P+ P P PP PC+V
Sbjct: 52  WLTWPPPTPLPDAPPPPPPHPCDV 75


>12_01_1024 -
           10467644-10469274,10469424-10469482,10469820-10470357,
           10470975-10471666,10471912-10472062,10473797-10473864,
           10473964-10474042,10474763-10474765,10476427-10477255
          Length = 1349

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +1

Query: 334 NGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 477
           N D   D  I  G  GTQ     D   +L  +VLKS  + CV A KA+
Sbjct: 730 NRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKAS 777


>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
          Length = 664

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 364 PDGDLGTQLRTDFDSGKELLCTVLKSCGE 450
           PDGDL  ++R   +SGKEL    L   G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234


>05_06_0151 - 25999366-26000044,26004820-26005637
          Length = 498

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -3

Query: 304 PRYQSVGSLRASREVRPCCVWRDRYLHT-FYH*RYQSQPK*TLAWPCF 164
           P  +  G  R + E   C  W DR  HT  Y+     QP  ++ + CF
Sbjct: 249 PLIEKAGERRETAERHECLAWLDRLSHTHVYNIVSHRQPDRSVVFLCF 296


>05_01_0297 - 2314687-2316021
          Length = 444

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +1

Query: 289 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCG 447
           + D + +G L + AD  D+R +    DGD G +LR  F S  +LL  V  S G
Sbjct: 91  VVDCTGEGVLFVEAD-ADVRLEELEEDGDGGGELRPPFPSMDQLLLDVEGSGG 142


>03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068
          Length = 145

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 43  PETPGPQPPSPCNVRP-CVKMVSLC*RVVHARLLKCPHP 156
           PE   P PP  C + P C  +   C  ++  +LL+  HP
Sbjct: 8   PENESPPPPPHCWIYPECTLVTRSCCLLLRLKLLRHGHP 46


>01_06_1303 -
           36132588-36132710,36133879-36134103,36134318-36134713,
           36135352-36135547,36135591-36135740,36135818-36135924,
           36135987-36136094,36136354-36136435,36136436-36136536,
           36136778-36136996,36137455-36137583,36137665-36137742,
           36137816-36137929,36138071-36138230,36139224-36139441
          Length = 801

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +3

Query: 18  DIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMS 149
           D E  H  T     +ATFPM    L  N   + +GR CK V +S
Sbjct: 438 DREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRGCKSVTVS 481


>10_01_0357 - 3928646-3928954
          Length = 102

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/47 (29%), Positives = 18/47 (38%)
 Frame = +2

Query: 326 WLTTVTCVRTSKSRMVTSAHSCVLTSTAARNCCAPC*NPAVRSASSP 466
           W        ++ +  V SA     T+ A   C  PC NP  RS   P
Sbjct: 3   WAAAAAATASAAATAVASA----ATAAATERCVTPCSNPTARSIPRP 45


>07_01_0200 + 1433859-1434377
          Length = 172

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -2

Query: 500 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 414
           LV L+ A  A+ A T    SSPQDF   HN++
Sbjct: 8   LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39


>07_01_0196 + 1400708-1401226
          Length = 172

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -2

Query: 500 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 414
           LV L+ A  A+ A T    SSPQDF   HN++
Sbjct: 8   LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39


>07_01_0192 + 1367558-1368076
          Length = 172

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -2

Query: 500 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 414
           LV L+ A  A+ A T    SSPQDF   HN++
Sbjct: 8   LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39


>07_01_0188 + 1334405-1334923
          Length = 172

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -2

Query: 500 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 414
           LV L+ A  A+ A T    SSPQDF   HN++
Sbjct: 8   LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39


>04_01_0031 + 381389-381841
          Length = 150

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
 Frame = +1

Query: 1   KTQQWVTSKTHTLR-----PETPGPQPPSPCNVRP 90
           + ++W T +T TLR     P+T  P PP P    P
Sbjct: 69  RERRWCTPRTSTLRREWALPDTASPPPPLPLEPAP 103


>02_05_0402 +
           28687597-28687671,28688123-28688235,28688927-28689432,
           28689544-28689717,28689953-28690082,28692241-28692772,
           28693578-28693823,28694648-28695061
          Length = 729

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
 Frame = +1

Query: 229 DICPSTHNMD---VPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 399
           D CP T   D      V++ +   TD        +M   G +        GDLG+  RTD
Sbjct: 233 DQCPGTSATDSTGATCVQQAEKVSTDSDQVAKAAMMTAEGAMNFMRSTISGDLGSFPRTD 292

Query: 400 FDSGKE 417
             SGKE
Sbjct: 293 AASGKE 298


>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
            13676868-13677330,13677855-13678036,13678093-13678235,
            13678315-13678423,13679000-13679456,13680490-13682473,
            13682507-13682626,13682920-13682971
          Length = 1467

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 19   TSKTHTLRPETPGPQPPSP 75
            TS  HTL P  P  +PPSP
Sbjct: 1108 TSDRHTLGPPLPDDRPPSP 1126


>03_02_0910 +
           12317493-12317960,12319678-12319734,12320592-12320666,
           12321219-12321299,12321472-12321546,12321818-12321862,
           12321975-12322064,12322153-12322254,12322366-12322420,
           12324966-12325027,12325521-12325555,12325877-12326115,
           12326219-12328035
          Length = 1066

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +1

Query: 226 EDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRED--LKIPDGDLGTQLRTD 399
           E+I P+ + MD+   + E Y +  I+++     +   GD+  +  L +P+ +L     + 
Sbjct: 571 EEIPPNANGMDIDSDREETYNVEGIAENSEDCRVRGGGDIDTECNLSLPEHELPLHQESK 630

Query: 400 FDS 408
            DS
Sbjct: 631 SDS 633


>02_01_0363 - 2612873-2613814
          Length = 313

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 4   TQQWVTSKTHTLRPETPGPQPPSPC 78
           + +W     +  +P  P P PPSPC
Sbjct: 96  SDKWEVGDNYLWQPLPPPPPPPSPC 120


>02_01_0358 - 2575858-2576796
          Length = 312

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 4   TQQWVTSKTHTLRPETPGPQPPSPC 78
           + +W     +  +P  P P PPSPC
Sbjct: 96  SDKWEVGDNYLWQPLPPPPPPPSPC 120


>02_01_0224 -
           1461924-1462227,1462602-1462798,1463059-1463213,
           1464101-1464207,1464289-1464375,1465332-1465414,
           1465959-1466027,1466332-1466658,1466744-1466957,
           1467170-1467267,1467516-1467554,1467672-1468160
          Length = 722

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 409 GKELLCTVLKSCGEECVIAVKANTALDK 492
           G+ L+  +L SC EE +  V++  +LDK
Sbjct: 338 GRSLISKILVSCSEEILTLVQSTGSLDK 365


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,807,825
Number of Sequences: 37544
Number of extensions: 391177
Number of successful extensions: 1446
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -