Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2137
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 89 2e-18
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 89 2e-18
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 89 2e-18
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 89 2e-18
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 89 2e-18
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 89 2e-18
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 84 1e-16
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 84 1e-16
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 79 4e-15
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 79 4e-15
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 76 3e-14
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 76 3e-14
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 68 7e-12
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 68 7e-12
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z50177-2|CAA90544.1| 336|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81029-5|CAB02701.1| 219|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical pr... 27 8.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 8.9
AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p4... 27 8.9
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/148 (31%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 129 KNNPGKSIVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 305
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 306 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 482
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 483 NXRIKDLVNPDSLSSATAAVLVNAIYFK 566
IK ++ DS++S AVL NA+YFK
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFK 165
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/148 (31%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 129 KNNPGKSIVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 305
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 306 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 482
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 483 NXRIKDLVNPDSLSSATAAVLVNAIYFK 566
IK ++ DS++S AVL NA+YFK
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFK 165
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/148 (31%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 129 KNNPGKSIVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 305
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 306 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 482
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 483 NXRIKDLVNPDSLSSATAAVLVNAIYFK 566
IK ++ DS++S AVL NA+YFK
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFK 165
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/148 (31%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 129 KNNPGKSIVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 305
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 306 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 482
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 483 NXRIKDLVNPDSLSSATAAVLVNAIYFK 566
IK ++ DS++S AVL NA+YFK
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFK 165
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/148 (31%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 129 KNNPGKSIVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 305
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 306 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 482
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 483 NXRIKDLVNPDSLSSATAAVLVNAIYFK 566
IK ++ DS++S AVL NA+YFK
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFK 165
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/148 (31%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 129 KNNPGKSIVLSAFSVLPPLAQLALASDGETHEELLKA-IGFPDDDAIRTEFASKSRDLRS 305
+ N +S+ S S+ L+ + +A+ GET +++ +A + D+ + FA+ S L +
Sbjct: 18 QQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLA 77
Query: 306 I-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 482
+G E+K+AN V+ G K+ +++ + ++N+ ++DF A++IN++V ENT
Sbjct: 78 AERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENT 137
Query: 483 NXRIKDLVNPDSLSSATAAVLVNAIYFK 566
IK ++ DS++S AVL NA+YFK
Sbjct: 138 GDHIKKIIGSDSINSDLVAVLTNALYFK 165
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 83.8 bits (198), Expect = 1e-16
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = +3
Query: 129 KNNPGKSIVLSAFSVLPPLAQLALASDGETHEELLKAI-GFPDDDAIRTEFASKSRDLR- 302
+ N +S V S S+ L+ + +A+ GET +E+ KA+ D+ + F++ S L
Sbjct: 27 QQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLV 86
Query: 303 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 482
+ KG E+ +AN ++ + + + + ++N+ ++F +A++IN++V ENT
Sbjct: 87 AEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENT 146
Query: 483 NXRIKDLVNPDSLSSATAAVLVNAIYFK 566
IK ++NPDS+S AVL NA YFK
Sbjct: 147 KGHIKKIINPDSISEELVAVLTNAFYFK 174
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 83.8 bits (198), Expect = 1e-16
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = +3
Query: 129 KNNPGKSIVLSAFSVLPPLAQLALASDGETHEELLKAI-GFPDDDAIRTEFASKSRDLR- 302
+ N +S V S S+ L+ + +A+ GET +E+ KA+ D+ + F++ S L
Sbjct: 27 QQNLTESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLV 86
Query: 303 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 482
+ KG E+ +AN ++ + + + + ++N+ ++F +A++IN++V ENT
Sbjct: 87 AEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENT 146
Query: 483 NXRIKDLVNPDSLSSATAAVLVNAIYFK 566
IK ++NPDS+S AVL NA YFK
Sbjct: 147 KGHIKKIINPDSISEELVAVLTNAFYFK 174
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 78.6 bits (185), Expect = 4e-15
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Frame = +3
Query: 147 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 323
S+VLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 324 KMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNXRIKDL 503
K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +IKDL
Sbjct: 81 KIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDL 140
Query: 504 VNPDSLSSATAAVLVNAIYFK 566
+ DS ++A A LVNA+YFK
Sbjct: 141 IPADSANNA-FAFLVNAMYFK 160
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 78.6 bits (185), Expect = 4e-15
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Frame = +3
Query: 147 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 323
S+VLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 324 KMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNXRIKDL 503
K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +IKDL
Sbjct: 81 KIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDL 140
Query: 504 VNPDSLSSATAAVLVNAIYFK 566
+ DS ++A A LVNA+YFK
Sbjct: 141 IPADSANNA-FAFLVNAMYFK 160
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 75.8 bits (178), Expect = 3e-14
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Frame = +3
Query: 153 VLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRT-EFASKSRDLRSIKGVEL 323
V S S+L LA + L + G T ++ ++ G D+ I F +K + S+ VE
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLN-SSVNDVET 90
Query: 324 KMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNXRIKDL 503
+AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T +I D+
Sbjct: 91 LIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDM 150
Query: 504 VNPDSLSSATAAVLVNAIYFKG 569
+ PD+L A+L+NAI+F+G
Sbjct: 151 IKPDNLKDVD-AILINAIFFQG 171
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 75.8 bits (178), Expect = 3e-14
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Frame = +3
Query: 153 VLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRT-EFASKSRDLRSIKGVEL 323
V S S+L LA + L + G T ++ ++ G D+ I F +K + S+ VE
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLN-SSVNDVET 90
Query: 324 KMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNXRIKDL 503
+AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T +I D+
Sbjct: 91 LIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDM 150
Query: 504 VNPDSLSSATAAVLVNAIYFKG 569
+ PD+L A+L+NAI+F+G
Sbjct: 151 IKPDNLKDVD-AILINAIFFQG 171
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 67.7 bits (158), Expect = 7e-12
Identities = 41/144 (28%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Frame = +3
Query: 144 KSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 314
+S+V S S+ L+ + G + +++ + G D+ + F+ S+++++ KG
Sbjct: 22 ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80
Query: 315 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNXRI 494
VE+ +ANKVY+ G ++ F + + +D +++D + A + IN +V TN +I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 495 KDLVNPDSLSSATAAVLVNAIYFK 566
K++ DS+ A A+L+N+IYFK
Sbjct: 140 KNIATQDSIKDA-IALLINSIYFK 162
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 67.7 bits (158), Expect = 7e-12
Identities = 41/144 (28%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Frame = +3
Query: 144 KSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 314
+S+V S S+ L+ + G + +++ + G D+ + F+ S+++++ KG
Sbjct: 22 ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80
Query: 315 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNXRI 494
VE+ +ANKVY+ G ++ F + + +D +++D + A + IN +V TN +I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 495 KDLVNPDSLSSATAAVLVNAIYFK 566
K++ DS+ A A+L+N+IYFK
Sbjct: 140 KNIATQDSIKDA-IALLINSIYFK 162
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 547 STPSISREPWSSKFDERLTSDRD 615
STP+ SR W S DE LT D D
Sbjct: 87 STPNNSRSNWRSDMDEELTDDED 109
>Z50177-2|CAA90544.1| 336|Caenorhabditis elegans Hypothetical
protein F46G10.4 protein.
Length = 336
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +3
Query: 348 HDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNXRIKDLVNPDSLSS 527
+ GG+L F V D + ID S NTV+ +N + + N +D+V P +
Sbjct: 106 NSGGQLLSEFGVGLEDY--AAYTEIDGSNNTVSVGHVNVYFLDAMNQMWEDMVQPSIKNR 163
Query: 528 ATAAVLVNAIYFKGAM 575
L+ GAM
Sbjct: 164 QNYTFLITGHSLGGAM 179
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 72 NVLKN-GNDNFTARMFTEVV-KNNPGKSIVLSAFSVLPPLAQLALASDGET 218
N+L+N G D+ R V+ +NN KSI + F +P L L L+ + T
Sbjct: 137 NMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSGNNMT 187
>Z81029-5|CAB02701.1| 219|Caenorhabditis elegans Hypothetical
protein C01A2.6 protein.
Length = 219
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 568 EPWSSKFDERLTSDRDF 618
EPW S + ERL ++DF
Sbjct: 93 EPWQSTYSERLEDEKDF 109
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -2
Query: 122 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQXNDCLHV 3
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
protein F57C7.4 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 117 TEVVKNNPGKSIVLSAFSVLPPLAQLAL 200
T ++KN P KS V +F++ P QLA+
Sbjct: 674 TTIIKNVPSKSDVFVSFTIPPAGTQLAM 701
>Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical
protein C14H10.3 protein.
Length = 830
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 523 AQPQRLFSSTPSISREPWSSKFDERLTSDRD 615
A P + TP I EP+++K DE TS+ +
Sbjct: 780 ATPPITKNETPQIPHEPFATKIDEEPTSESE 810
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -2
Query: 122 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQXNDCLHV 3
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p450
family protein 34A6 protein.
Length = 498
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 223 KSF*KLSASLTTMLYEQNSRVKAVT-FDQLKALSLKWRTKYTF 348
K F +L LT M E +S ++ V LK+ +KWRTK TF
Sbjct: 197 KEFEELKTKLT-MALENSSIIEGVMPLWLLKSKFMKWRTKTTF 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,360,254
Number of Sequences: 27780
Number of extensions: 256612
Number of successful extensions: 753
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -