Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2136
(600 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 219 3e-56
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 204 2e-51
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 139 5e-32
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 123 4e-27
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 95 9e-19
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 91 2e-17
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 87 2e-16
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 87 2e-16
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 84 3e-15
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 83 6e-15
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 79 1e-13
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 73 4e-12
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 69 8e-11
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 68 1e-10
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 65 1e-09
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 61 2e-08
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 60 4e-08
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 56 6e-07
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 55 1e-06
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 55 1e-06
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 50 4e-05
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 49 7e-05
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 48 2e-04
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 48 2e-04
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 46 5e-04
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 46 0.001
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 46 0.001
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 46 0.001
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 44 0.004
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 43 0.005
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 43 0.005
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 43 0.006
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 39 0.078
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.18
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.18
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 38 0.18
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 38 0.24
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 37 0.32
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 37 0.32
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 37 0.42
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 36 0.55
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 36 0.73
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 36 0.97
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 35 1.3
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 35 1.7
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 35 1.7
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 35 1.7
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 34 2.2
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 34 2.9
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 33 3.9
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 33 5.1
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 33 5.1
UniRef50_UPI00015B50B9 Cluster: PREDICTED: similar to Rho GTPase... 32 9.0
UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11; Ar... 32 9.0
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 219 bits (536), Expect = 3e-56
Identities = 113/193 (58%), Positives = 136/193 (70%)
Frame = +3
Query: 3 QRRGAGSVFGFSHXRRGKALPKLRSLDYG*TSWXHQGSC*GI*SMTLVEVHLWLLYTFRD 182
QR+GAGSVF +H ++ K KLRSLD+ S +G I L +++ FRD
Sbjct: 8 QRKGAGSVFK-AHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVH-FRD 65
Query: 183 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGR 362
PY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLE K GDRGR
Sbjct: 66 PYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGR 125
Query: 363 LARAXGNFATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGR 542
LAR GN+ATVI HN D K+TR K +KV+PS+NR M RIDKPILKAGR
Sbjct: 126 LARTSGNYATVIAHNQDTKKTRVKLPS-GAKKVVPSANRAMVGIVAGGGRIDKPILKAGR 184
Query: 543 AYPKXKVKRNCWP 581
AY K KVKRN WP
Sbjct: 185 AYHKYKVKRNSWP 197
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 204 bits (497), Expect = 2e-51
Identities = 107/193 (55%), Positives = 129/193 (66%)
Frame = +3
Query: 3 QRRGAGSVFGFSHXRRGKALPKLRSLDYG*TSWXHQGSC*GI*SMTLVEVHLWLLYTFRD 182
QR+GAGSVF +H + K +LR++D+ +G I L + FRD
Sbjct: 8 QRKGAGSVFR-AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV-VFRD 65
Query: 183 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGR 362
PY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K GDRG+
Sbjct: 66 PYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGK 125
Query: 363 LARAXGNFATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGR 542
LARA GN+ATVI HNP+ K+TR K +KV+ S+NR + RIDKPILKAGR
Sbjct: 126 LARASGNYATVISHNPETKKTRVKLPS-GSKKVISSANRAVVGVVAGGGRIDKPILKAGR 184
Query: 543 AYPKXKVKRNCWP 581
AY K K KRNCWP
Sbjct: 185 AYHKYKAKRNCWP 197
Score = 36.7 bits (81), Expect = 0.42
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 116 LLRDIIHDPGRGAPLAVVHF 175
+++DIIHDPGRGAPLA V F
Sbjct: 44 IVKDIIHDPGRGAPLAKVVF 63
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 139 bits (336), Expect = 5e-32
Identities = 88/193 (45%), Positives = 109/193 (56%)
Frame = +3
Query: 3 QRRGAGSVFGFSHXRRGKALPKLRSLDYG*TSWXHQGSC*GI*SMTLVEVHLWLLYTFRD 182
QR+G GSVF +H + K LR++D+ +G I L + TFRD
Sbjct: 8 QRKGPGSVFK-AHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAKV-TFRD 65
Query: 183 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGR 362
PYK+K R E FIA EG+YTGQF+YCGKKA NL+ RG+
Sbjct: 66 PYKYKMRTETFIATEGMYTGQFIYCGKKA--------------------NLQI----RGK 101
Query: 363 LARAXGNFATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGR 542
LARA GN+ATVI HNPD K++R K +KV+PS+NR + RIDKP+LKAGR
Sbjct: 102 LARASGNYATVISHNPDTKKSRVKLPS-GSKKVIPSANRAIVGIVAGGGRIDKPMLKAGR 160
Query: 543 AYPKXKVKRNCWP 581
AY K K KRNCWP
Sbjct: 161 AYHKYKAKRNCWP 173
Score = 36.3 bits (80), Expect = 0.55
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 116 LLRDIIHDPGRGAPLAVVHF 175
+++DI+HDPGRGAPLA V F
Sbjct: 44 VVKDIVHDPGRGAPLAKVTF 63
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 123 bits (296), Expect = 4e-27
Identities = 52/85 (61%), Positives = 67/85 (78%)
Frame = +3
Query: 174 FRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGD 353
FR+P ++ KELFI EGLY+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K GD
Sbjct: 54 FRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGD 113
Query: 354 RGRLARAXGNFATVIGHNPDAKRTR 428
RG +ARA GN+ATVI HN D + TR
Sbjct: 114 RGIIARASGNYATVISHNADNETTR 138
Score = 35.5 bits (78), Expect = 0.97
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +2
Query: 107 SRELLRDIIHDPGRGAPLAVVHF--PRSIQVQDKE 205
SR L++ I HDPGRGAPLA V F PR + DKE
Sbjct: 32 SRGLVKSIEHDPGRGAPLARVVFRNPRQYGL-DKE 65
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 95.5 bits (227), Expect = 9e-19
Identities = 51/124 (41%), Positives = 70/124 (56%)
Frame = +3
Query: 210 LFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFA 389
L A EG+Y GQ + G A E GN++P+G +PEGT V N+E + GD G+LAR G++A
Sbjct: 67 LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYA 126
Query: 390 TVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAYPKXKVKR 569
V+G R + + K +P+ +R RI+KPI+KAG AY K KVK
Sbjct: 127 LVVGRAGAKTILRLPSGK---DKEVPNDSRATIGIPAGAGRIEKPIMKAGFAYHKWKVKA 183
Query: 570 NCWP 581
WP
Sbjct: 184 RKWP 187
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 90.6 bits (215), Expect = 2e-17
Identities = 48/121 (39%), Positives = 68/121 (56%)
Frame = +3
Query: 219 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
A EGLY GQ V GK A+ + GN+M +G +PEGT++ N+E + GD G+ ARA G +A VI
Sbjct: 70 AAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVI 129
Query: 399 GHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAYPKXKVKRNCW 578
G P+ +T + +V S R RI+KP LKAG+ Y + + K +
Sbjct: 130 GQKPEENKTIIRLPSGRTVEV-DSRGRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKY 188
Query: 579 P 581
P
Sbjct: 189 P 189
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 87.4 bits (207), Expect = 2e-16
Identities = 49/136 (36%), Positives = 71/136 (52%)
Frame = +3
Query: 192 FKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLAR 371
FK EL+IA E LY + + CG +A GNV+P+ +P G VCN+E K GD G+LAR
Sbjct: 95 FKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLAR 154
Query: 372 AXGNFATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAYP 551
+ G F V+ H+ T+ K + K+L S R + +KP+LKAG+ Y
Sbjct: 155 SAGAFVGVLSHSKYNNVTKLKLPS-KKIKILSSFCRATIGVVAGGGKYEKPLLKAGKNYY 213
Query: 552 KXKVKRNCWPXFTVVF 599
K K +P + +
Sbjct: 214 KFKSLNKKYPIVKIFY 229
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 87.4 bits (207), Expect = 2e-16
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Frame = +3
Query: 192 FKTRKELFI-APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLA 368
F+ +ELF+ A EG+ G + CG A ++ GN++P+G +PEG +CN+E K D G+
Sbjct: 61 FENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFV 120
Query: 369 RAXGNFATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAY 548
R+ G +ATV+ H +A RT + + P R + R+D+P LKAG+ Y
Sbjct: 121 RSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKC-RAVVGIVAGSGRVDRPWLKAGKKY 177
Query: 549 PKXKVKRNCWPXFTVV 596
K K + +P + V
Sbjct: 178 HKMKTRAAKYPRVSAV 193
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 83.8 bits (198), Expect = 3e-15
Identities = 45/121 (37%), Positives = 69/121 (57%)
Frame = +3
Query: 219 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
A EG+YTGQ V G A GN++P+ A+PEGT + N+E + GD G+LAR+ G +A ++
Sbjct: 74 AAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILV 133
Query: 399 GHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAYPKXKVKRNCW 578
G + ++ + + ++ K + + R R +KP+LKAG AY K K K W
Sbjct: 134 GKSGNSAIIQLPSGKV---KQVNAKARATIGIAAGAGRDEKPLLKAGNAYYKWKAKAKKW 190
Query: 579 P 581
P
Sbjct: 191 P 191
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 82.6 bits (195), Expect = 6e-15
Identities = 42/119 (35%), Positives = 63/119 (52%)
Frame = +3
Query: 225 EGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGH 404
+GL GQ + GK A + GN++ VG +PEGTI+ N+E GD G+ AR+ G + V+G
Sbjct: 71 QGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGK 130
Query: 405 NPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAYPKXKVKRNCWP 581
D + + ++ + S+ R + +KP+LKAG Y K KVK WP
Sbjct: 131 TGDKVLVKLSSEKIAQ---VSSNARAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWP 186
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/126 (33%), Positives = 63/126 (50%)
Frame = +3
Query: 204 KELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGN 383
+ L + PEG G + CG A ++ GN +P+ +PEG + N+E + GD G+ ARA G
Sbjct: 69 ERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGC 128
Query: 384 FATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAYPKXKV 563
+AT+I H D RT + + R P + R +KP +KAG+ Y +
Sbjct: 129 YATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGGGKR-EKPFVKAGKKYYHMRS 185
Query: 564 KRNCWP 581
K WP
Sbjct: 186 KGGKWP 191
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 73.3 bits (172), Expect = 4e-12
Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +3
Query: 3 QRRGAGSVF-GFSHXRRGKALPKLRSLDYG*TSWXHQGSC*GI*SMTLVEVHLWLLYTFR 179
QR+ AGSVF +H R+G A K RSLD+G + +G I L + TFR
Sbjct: 8 QRKVAGSVFKSHTHHRKGPA--KFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARV-TFR 64
Query: 180 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDR 356
P++FK +KELF+ E +YCGKKATL VGNV+P+ ++PEG +G R
Sbjct: 65 HPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
Score = 33.5 bits (73), Expect = 3.9
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 116 LLRDIIHDPGRGAPLAVVHF 175
++ +IIHDPGRGAPLA V F
Sbjct: 44 VVTEIIHDPGRGAPLARVTF 63
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 68.9 bits (161), Expect = 8e-11
Identities = 40/126 (31%), Positives = 62/126 (49%)
Frame = +3
Query: 204 KELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGN 383
+ L AP G+ G VY GK+A +G++ P+ +PEGT + LE GD G+L RA G+
Sbjct: 66 QSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGD 125
Query: 384 FATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAYPKXKV 563
FA ++ D + + + K L ++ R + R +KP +KAG Y
Sbjct: 126 FALLVQKLGDKVIVQLPSGQF---KTLSANARAVIGVIAGGGRKEKPFVKAGNKYYWASS 182
Query: 564 KRNCWP 581
+ WP
Sbjct: 183 RNRHWP 188
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 68.1 bits (159), Expect = 1e-10
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = +3
Query: 192 FKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLAR 371
FK + A EG+YTGQ + G A +++GN+ + +PEG V ++E GD G A
Sbjct: 55 FKEDDCMVPASEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAM 114
Query: 372 AXGNFATVIGHNPDAKRTRSKATRLEPRKVLPSSN-RXMXXXXXXXXRIDKPILKAGRAY 548
G+++ V+ H + T K +K+ SS R + DKP+LKA A+
Sbjct: 115 VNGSYSLVVNHRKETNETVIKIP--SGKKLTVSSECRCIVGVVAGGGIHDKPLLKASVAH 172
Query: 549 PKXKVKRNCWP 581
K K + + +P
Sbjct: 173 YKAKARGHVFP 183
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 228 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGHN 407
G G+ + G K+ +E GNV+ + +P+GTIVCN+E GD G + ++ G ATV H
Sbjct: 75 GAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHG 134
Query: 408 PD---AKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAYPKXKVKRNCW 578
+ K K T L P+ NR M ++P + AG + K K +
Sbjct: 135 DEGVTVKLPSGKFTTLNPK------NRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKY 188
Query: 579 P 581
P
Sbjct: 189 P 189
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +3
Query: 204 KELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGN 383
K + +G+ G + + A ++VGN P+ +PEGT++ N+E K G G++AR+ G
Sbjct: 102 KRYILFAKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGT 161
Query: 384 FATVIGHNPDAKRTRSKATRLEPRKVL 464
++G + D K + T E RKVL
Sbjct: 162 SVQILGKDDDGKYVTLRLTSGEVRKVL 188
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = +3
Query: 204 KELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGN 383
K +AP+GL G V G +A ++VGN +P+ +P GT++ N+E K G G+LAR+ G
Sbjct: 101 KSYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGT 160
Query: 384 FATVIG 401
A ++G
Sbjct: 161 SAQLLG 166
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 56.0 bits (129), Expect = 6e-07
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +3
Query: 216 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATV 395
+AP+ L G V G ++ GN MP+ +MP GTI+ N+E G G++AR+ G +A +
Sbjct: 105 LAPQRLAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQL 164
Query: 396 IGHN 407
+G +
Sbjct: 165 VGRD 168
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/118 (27%), Positives = 52/118 (44%)
Frame = +3
Query: 228 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGHN 407
G G + G K+ + GNV+ V +P+GT VCN+E GD G + ++ G ATV H
Sbjct: 74 GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHG 133
Query: 408 PDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGRAYPKXKVKRNCWP 581
+ + R L NR M ++P + AG + + + K +P
Sbjct: 134 EGGVVLKLPSGRF---STLNPKNRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYP 188
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 54.8 bits (126), Expect = 1e-06
Identities = 42/127 (33%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Frame = +3
Query: 198 TRKELF-IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARA 374
T K+++ IA G Y GQ + G T+ G + +P+G+ V N+E GD G R+
Sbjct: 58 TGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRS 117
Query: 375 XGNFATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGR--AY 548
G FA V+ H R K R P R ID PILKAG Y
Sbjct: 118 AGTFALVVSH---GSRVTLKLPSGSMRDFDPRC-RATVGVVAASGIIDAPILKAGTHVHY 173
Query: 549 PKXKVKR 569
+ K KR
Sbjct: 174 LRSKAKR 180
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 50.0 bits (114), Expect = 4e-05
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +3
Query: 204 KELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGN 383
K + P G G + G + +++GN +P+ MP GT + N+E +G G+LARA G
Sbjct: 99 KRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGA 158
Query: 384 FATVI 398
A +I
Sbjct: 159 VAKLI 163
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 49.2 bits (112), Expect = 7e-05
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = -2
Query: 359 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 180
T++TH + +AHNGTL S R +I+N + L+TI++L V G +E+L L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 179 AE 174
AE
Sbjct: 67 AE 68
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 207 ELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 317
E + E +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +3
Query: 204 KELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGN 383
+ +AP GL G + G+ A ++VGN +P+ +P GT+V +E K G + AR+ G
Sbjct: 107 RRYIVAPAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGT 166
Query: 384 FATVIGHNPDAKRTRSKATRLEPRKVL 464
++ + R ++ E RKVL
Sbjct: 167 SIQLVAKEGEYATLRMRSG--EMRKVL 191
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Frame = +3
Query: 204 KELFIAPEGLYTGQFVY--------CGKKAT-LEVGNVMPVGAMPEGTIVCNLEXKMGDR 356
K I PEGL G V GK ++ GN MP+ +PEGTIV N+E G
Sbjct: 117 KRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHNIEFIPGKG 176
Query: 357 GRLARAXGNFATVIGHN 407
G++ARA G +A V+G +
Sbjct: 177 GQIARAAGTWAQVLGRS 193
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +3
Query: 204 KELFIAPEGLYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXG 380
K I+P+G+ G + + ++ G MP+ +PEGT V N+E G++AR+ G
Sbjct: 106 KSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAG 165
Query: 381 NFATVIGHNPDAKRTRSKATRLEPRKVL 464
++A ++G + K + E RK L
Sbjct: 166 SYARILGQDETGKYVILQLLSGETRKFL 193
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/80 (37%), Positives = 39/80 (48%)
Frame = +3
Query: 222 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIG 401
PEG+ G + G A VGN P MP GT++ +E G G+ ARA G A
Sbjct: 107 PEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQSARAAGAPA---- 162
Query: 402 HNPDAKRTRSKATRLEPRKV 461
P AK +S +RL P +V
Sbjct: 163 -KPVAKEGQSATSRLPPGEV 181
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 216 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATV 395
+A L G FV G + GN +P+ ++P GT+V N+E G G++ RA G A +
Sbjct: 199 LASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQL 258
Query: 396 I-GHN 407
I HN
Sbjct: 259 IKKHN 263
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +3
Query: 273 LEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGHNPDAKRTRSKATRLEP 452
++ GN +P+ +P G+I+ N+ G RG+L +A G FA ++ +P+ K+ K + E
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 453 RKV 461
R V
Sbjct: 272 RYV 274
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +3
Query: 216 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATV 395
+AP G G + G ++ ++VGN +P+ +P T + N+E G G+L R+ G+ AT+
Sbjct: 131 LAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATL 190
Query: 396 I 398
+
Sbjct: 191 V 191
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = -2
Query: 359 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 180
T +TH + +AHNGTL S R +I+N + L+ +++L V +E+L L +
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLMLVPEGM 78
Query: 179 AE-SVQQPKVH 150
AE ++ + ++H
Sbjct: 79 AEGNLSEAQIH 89
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 43.2 bits (97), Expect = 0.005
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 282 GNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGHNPDAKRTRSKATRLEPRK 458
GN +P+ +P GT++ N+ + G G+L R+ G +ATVI D T+++A +E ++
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSD---TKTRANEVETQE 267
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3
Query: 282 GNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
GN +P+ MP GT+V N+ + G G+L R+ G FATVI
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVI 251
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 39.1 bits (87), Expect = 0.078
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 279 VGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
VGN +P+ +P GT V N+E G +L RA G FA +I
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQII 398
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.18
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 282 GNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
G+ PVGA+P GT++ E K G R G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.18
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 261 KKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGH 404
+ TL+ GNV+P+ +P G V N+ + R +L R+ G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 216 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATV 395
+APEGL G ++ + L+ GN + +P G + ++E + RA G++AT+
Sbjct: 86 LAPEGLLVGDCIFAKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATI 145
Query: 396 I 398
I
Sbjct: 146 I 146
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 37.5 bits (83), Expect = 0.24
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 276 EVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGHNPDAK 419
+VGN +P+ GT V N+E + G G++ RA G +A V+ P AK
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAK 341
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 37.1 bits (82), Expect = 0.32
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +3
Query: 201 RKELFIAPEGLYTGQFV----YCGKKA-TLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRL 365
RK IA E + G + G+ A + G+ P+GA+P GT+V NLE + G
Sbjct: 132 RKRWIIATENMQAGDVIKTSAVIGRMAVSANEGDAYPLGALPVGTLVNNLEIQPGKGSEY 191
Query: 366 ARAXGNFATVI 398
RA G ++
Sbjct: 192 IRAAGTSGVLL 202
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 270 TLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGHNPDAKR 422
T + GN +P+ +P GTI+ N+ G+ R+ G +A V+ P+ K+
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKK 284
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 36.7 bits (81), Expect = 0.42
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 177 RDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMG 350
R+ + T +AP G+ G V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 159 REGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 36.3 bits (80), Expect = 0.55
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 110 RELLRDIIHDPGRGAPLAVVHF 175
R ++++IIHDPGRGAPLA V F
Sbjct: 38 RGVVKEIIHDPGRGAPLAKVAF 59
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 35.9 bits (79), Expect = 0.73
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 198 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEXKMGDRGR 362
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 146 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 205
Query: 363 LARAXGNFATVI 398
RA G ++
Sbjct: 206 YIRAAGTCGVLL 217
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 35.5 bits (78), Expect = 0.97
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 279 VGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
+G+ MP+G M GTI+ N+E G ++ RA G A ++
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL 53
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 279 VGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
VGN + + +P GT V N+E G +L RA G FA +I
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQII 360
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 282 GNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGHNPDAKRTRSK 434
GN +P+ +P GT+V N+ +M R+ G +AT+I + + +K
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTK 204
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 34.7 bits (76), Expect = 1.7
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +3
Query: 201 RKELFIAPEGLYTGQFV----YCGKKA-TLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRL 365
RK IA E + + G+ A + + G+ P+GA+P GT+V NLE + G
Sbjct: 98 RKRWIIATENMQAEDIIKTSAVIGRMAVSAKEGDAYPLGALPVGTLVNNLEIQPGKGSEY 157
Query: 366 ARAXGNFATVI 398
RA G ++
Sbjct: 158 IRAAGTSGVLL 168
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 279 VGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVIGHNPDAKRTR 428
+GN + + +P GT++ N+E G + RA G FA +I + R R
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLIQKHEATVRLR 171
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +3
Query: 213 FIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFAT 392
F+ + L G + G KA L++GN +P+ + G+ + N+E + +G L + + A
Sbjct: 95 FLLTKNLKIGSQINFGFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVKNANHNAI 154
Query: 393 VI 398
++
Sbjct: 155 IL 156
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 34.3 bits (75), Expect = 2.2
Identities = 21/95 (22%), Positives = 42/95 (44%)
Frame = -2
Query: 488 DHXSVAXWQNLSWLQTGSFTSCTLSIRIVSNHSGEVSXGTCQTTSITHFLFKIAHNGTLR 309
+H S + W NL IR+V++ + ++ + TSIT+ +F + GT
Sbjct: 68 NHCSASTWNNLL-SPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFG 126
Query: 308 HSSNRHHISNFKSCFLSTINKLACVEPFGSNEELL 204
+ ++ + FL+ N+LA V ++ +
Sbjct: 127 SRAQGQNVIGNEGGFLTAANELARVYALSHHDRFI 161
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 33.9 bits (74), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 282 GNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
G+ P+GA+P GT + LE G + L A G F T++
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTIL 202
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 33.5 bits (73), Expect = 3.9
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 276 EVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
+VGN +P+ + GT V ++E G +LARA G +A +I
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII 399
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 33.1 bits (72), Expect = 5.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 282 GNVMPVGAMPEGTIVCNLEXKMGDRGRLARAXGNFATVI 398
G+ P+GA+P GT + LE G L A G F T++
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL 199
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 33.1 bits (72), Expect = 5.1
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 240 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 338
G +Y G+ L++GN++P+ +P G+ + N+E
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIE 141
>UniRef50_UPI00015B50B9 Cluster: PREDICTED: similar to Rho GTPase
activating protein 6; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Rho GTPase activating protein 6 -
Nasonia vitripennis
Length = 1467
Score = 32.3 bits (70), Expect = 9.0
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 319 VPSGIAPTGITFPTSRVAFFPQ*TNWPV*SPSGAMKSSFLVLNL--YGSRKVYNSQRC 152
V ++PT T PTS +A P T P SPS ++F LN SRK+Y+ + C
Sbjct: 1033 VEENLSPTATTSPTSPLAASPSAT-VPS-SPSATTSTTFSTLNAGSSASRKLYSREEC 1088
>UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11;
Arabidopsis thaliana|Rep: DC1 domain-containing protein
- Arabidopsis thaliana (Mouse-ear cress)
Length = 692
Score = 32.3 bits (70), Expect = 9.0
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 338 FKIAHNGTLRHSSNRH-HISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 180
FK + T+ H S+RH H+S K S+ K AC P GS+ L C E +I
Sbjct: 363 FKRNDDNTIDHFSHRHNHMSLDKGGEESSFCK-ACAHPIGSSSSLYKCSECSFI 415
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,683,552
Number of Sequences: 1657284
Number of extensions: 11103358
Number of successful extensions: 25534
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 24814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25513
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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