Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2136
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   2.0  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   2.0  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.9  

>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 187 TSSRQGRSSSLLPKGSTQANLFIVERK 267
           TSS  GRS + LP   T+ + F ++ K
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQCK 54


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 187 TSSRQGRSSSLLPKGSTQANLFIVERK 267
           TSS  GRS + LP   T+ + F ++ K
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQCK 54


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 187 TSSRQGRSSSLLPKGSTQANLFIVERK 267
           TSS  GRS + LP   T+ + F ++ K
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQCK 54


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +2

Query: 377  WKLRHCDWTQS 409
            W   HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 162 LLYTFRDPY 188
           LLYT+R PY
Sbjct: 37  LLYTYRQPY 45


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 192 FKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPV 299
           FK      +  + L+T +F +    ATL V N++ V
Sbjct: 455 FKNENLSEMVKQFLFTQKFTFVAGLATLSVLNLLSV 490


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -2

Query: 326 HNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLE 192
           H   L H+   HH+    S F S+ +      PF  N  LLP  E
Sbjct: 343 HQAMLHHNPMSHHLKQEPSGFTSSNH------PFSIN-RLLPTAE 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,292
Number of Sequences: 336
Number of extensions: 2681
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)