Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2136
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   219   4e-59
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   4.3  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    23   7.5  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    23   10.0 
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    23   10.0 

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  219 bits (536), Expect = 4e-59
 Identities = 112/193 (58%), Positives = 134/193 (69%)
 Frame = +3

Query: 3   QRRGAGSVFGFSHXRRGKALPKLRSLDYG*TSWXHQGSC*GI*SMTLVEVHLWLLYTFRD 182
           QR+GAGSVF  +H ++ K  PKLR LDY       +G    I         L ++  FRD
Sbjct: 8   QRKGAGSVFR-AHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVV-NFRD 65

Query: 183 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGR 362
           PY+F+  K+LFIA EG+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLE K GDRG+
Sbjct: 66  PYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGK 125

Query: 363 LARAXGNFATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGR 542
           LAR  GN+A+VI HNPD KRTR K      +KVLPS+NR M        RIDKPILKAGR
Sbjct: 126 LARTSGNYASVIAHNPDTKRTRVKLPS-GAKKVLPSANRAMVGIVAGGGRIDKPILKAGR 184

Query: 543 AYPKXKVKRNCWP 581
           AY K KVKRNCWP
Sbjct: 185 AYHKYKVKRNCWP 197


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 368 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 240
           C+T SIT  +        LRH      +S ++S +L  ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 260 STINKLACVEPFGSNEELLPCLEL 189
           S + KL C+ PF  + ++  C +L
Sbjct: 8   SVVGKLTCLSPFLQSIKVASCCQL 31


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 544 HTPSXRSNVTAGHXLPW 594
           HT   + N+ AGH +P+
Sbjct: 94  HTTGLQKNMVAGHFVPY 110


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 544 HTPSXRSNVTAGHXLPW 594
           HT   + N+ AGH +P+
Sbjct: 94  HTTGLQKNMVAGHFVPY 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,536
Number of Sequences: 2352
Number of extensions: 11673
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)