Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2136
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   185   2e-47
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    32   0.36 
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep...    27   7.7  
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue...    27   7.7  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  185 bits (451), Expect = 2e-47
 Identities = 94/193 (48%), Positives = 122/193 (63%)
 Frame = +3

Query: 3   QRRGAGSVFGFSHXRRGKALPKLRSLDYG*TSWXHQGSC*GI*SMTLVEVHLWLLYTFRD 182
           QR+GAG +F  SH +  K   KLR LDY       +G    I         L ++  FRD
Sbjct: 8   QRKGAGGIFK-SHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAII-AFRD 65

Query: 183 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGR 362
           PYK+KT K   +A EG++TGQF++CG KA +++GN++PVG +PEGT +CN+E K GDRG 
Sbjct: 66  PYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGV 125

Query: 363 LARAXGNFATVIGHNPDAKRTRSKATRLEPRKVLPSSNRXMXXXXXXXXRIDKPILKAGR 542
           +ARA GN+ATVI HNPD K+TR +      +KV+ S NR M        R DKP+LKAGR
Sbjct: 126 IARASGNYATVIAHNPDTKKTRIRLPS-GAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGR 184

Query: 543 AYPKXKVKRNCWP 581
           +Y K K KRN WP
Sbjct: 185 SYHKYKAKRNSWP 197


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 282 GNVMPVGAMPEGTIVCNLE-XKMGDRGRLARAXGNFATVIGHNPD 413
           GN  P+G++  GT++ ++E     D     +A G  AT++ H  D
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGD 204


>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
           homolog protein.
          Length = 1846

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 154 TFGCCTLSAIHTSSRQGRSSSLLPKGSTQANLF 252
           T GCC+ SAI  SS Q +     P  + +++ F
Sbjct: 880 TPGCCSCSAIEESSEQNKKKRPDPMSAIESSAF 912


>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
           formation protein 2 protein.
          Length = 1843

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 154 TFGCCTLSAIHTSSRQGRSSSLLPKGSTQANLF 252
           T GCC+ SAI  SS Q +     P  + +++ F
Sbjct: 877 TPGCCSCSAIEESSEQNKKKRPDPMSAIESSAF 909


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,226,373
Number of Sequences: 27780
Number of extensions: 264866
Number of successful extensions: 571
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)