Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2135
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         25   2.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.4  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   9.4  

>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 32  TVTFKFGEYHADGSVQVLATDYNNYAIAYNCKYDD 136
           T+TFK G+ +       LATDY    +  +  + D
Sbjct: 53  TLTFKDGQTYTQAIAFTLATDYGTVRLMSSYNFTD 87


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 467  MTIFFAIFP*CQFGLKFFAFVKDR 538
            + +F  +F    FG+ FF  VKD+
Sbjct: 1757 LLLFLVMFIFAIFGMSFFMHVKDK 1780


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
 Frame = +2

Query: 35  VTFKFGEYHADGSVQVL--ATDYNNYAIAYNCKYDDKKKSHQ 154
           VT      H  G   VL  ATD NNY +A   +       HQ
Sbjct: 276 VTSSSVHLHTGGHSTVLGSATDNNNYILAQQQQQQHHHHQHQ 317


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,624
Number of Sequences: 2352
Number of extensions: 12764
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)