Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2129
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.49 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.0  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   7.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 255 RAPNPGRQPFGQSAVDYIDLSIEVPAP 335
           RA N G+QP  + ++ Y+ +    P P
Sbjct: 707 RAVNIGQQPGAKESISYLSMENNAPPP 733


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 208 HYCLFVGS*C 179
           HYCLFV S C
Sbjct: 114 HYCLFVASNC 123


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 208 HYCLFVGS*C 179
           HYCLFV S C
Sbjct: 114 HYCLFVASNC 123


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +1

Query: 196 TSNSGREPGPP-DESSRPASKEPPT 267
           T NS   P PP +E++ P   + PT
Sbjct: 38  TPNSAASPAPPEEEAASPTPGDVPT 62


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 500 G*CAVSDSSHASRNC 544
           G C   DS HA ++C
Sbjct: 108 GICCSQDSCHADKSC 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,460
Number of Sequences: 336
Number of extensions: 2847
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)