Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2125
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 70 1e-12
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 58 6e-09
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 46 3e-05
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 46 3e-05
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 46 3e-05
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 42 5e-04
06_03_1255 + 28780181-28781172,28782065-28782932 41 8e-04
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 39 0.003
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 39 0.004
02_01_0381 - 2764331-2764342,2768966-2769907 38 0.006
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 37 0.017
08_01_0397 - 3509186-3510291,3510322-3512335 36 0.030
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 35 0.052
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 35 0.052
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 35 0.069
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 33 0.16
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 32 0.37
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 32 0.49
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 32 0.49
03_05_0865 - 28365430-28367640 31 0.64
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 31 0.85
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 31 0.85
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 31 0.85
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 29 2.6
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 29 2.6
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 29 2.6
01_06_0886 + 32725504-32725824,32725905-32726658,32727911-327280... 29 3.4
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 29 3.4
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 28 6.0
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 28 6.0
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 70.1 bits (164), Expect = 1e-12
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Frame = +1
Query: 532 VAVEXHN---PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
+ VE H+ P++YF+EANFPDY Q + G+ EPTPIQ+QGWP+A+ GR
Sbjct: 144 ITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGR 194
Score = 34.7 bits (76), Expect = 0.069
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 408 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVPV 530
P D SL PF KNFY P V S +V +YR + ++ V
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITV 146
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 58.0 bits (134), Expect = 6e-09
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +1
Query: 490 MKSKSIEINTRYL*VAVEXHN---PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 660
M + +E R + VE + P++ F + FP+YV Q + G+ EPTPIQ+QGWP+
Sbjct: 65 MTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPM 124
Query: 661 AMSGR 675
A+ GR
Sbjct: 125 ALRGR 129
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 417 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVPV 530
D L F KNFY P+V + EVE YR + E+ V
Sbjct: 44 DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITV 81
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P FE FP + Q + G+ PTPIQAQ WP+A+ R
Sbjct: 602 PFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNR 642
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 666
PI FE FP + + ++ G+ PTPIQAQ WPIA+
Sbjct: 148 PITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 532 VAVEXHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
V E P F+ FP + + V+ G+ PTPIQAQ WPIA+ R
Sbjct: 171 VGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNR 218
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
PI+ F + FP + + GY++PT IQ Q PI +SGR
Sbjct: 217 PIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGR 257
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 411 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEY 506
D ++ +PFNK+FY+ P+V S EV +Y
Sbjct: 170 DHSTIEYEPFNKDFYEEKPSVSGMSEQEVADY 201
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P + F + P+ + + ++ G ++PTPIQ QG P+A+SGR
Sbjct: 171 PSRSFGDLRLPEPILRALRGKGIEKPTPIQVQGLPVALSGR 211
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +1
Query: 409 QIGILFHSNLSTKTFMIHILQFSKDHHMKSKSIEINTRYL*VAVEXHN-----PIQYFEE 573
++ I+ HS + + F ++ KD M + E+ T + ++ H PI+ + +
Sbjct: 231 KLAIVDHSKIEYQPFRKNLYIEVKDITMMTGE-EVATYRKNLELKVHGKDVPKPIKTWVQ 289
Query: 574 ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
+ + +K +G+++P PIQAQ PI MSGR
Sbjct: 290 SGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGR 323
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P FE A + V + V GY+ PTP+Q PIA++GR
Sbjct: 82 PADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGR 122
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P + F + P+ + + ++ G +PTPIQ QG P+ +SGR
Sbjct: 180 PARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGR 220
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +1
Query: 553 PIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P++ FEE Y+ + +G++EPTPIQ Q PI +SGR
Sbjct: 140 PLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 35.9 bits (79), Expect = 0.030
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 394 RTCDAQIGILFHSNLSTKTFMIHILQFSKD-HHMKSKSIEINTRYL*VAVEXHN---PIQ 561
+T ++ I+ HS + + F + KD M ++ + + L + V + PI+
Sbjct: 365 KTKAEKLAIVDHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIK 424
Query: 562 YFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
+ ++ + +K +G+++P IQAQ PI MSGR
Sbjct: 425 TWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGR 462
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 565 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 672
FE + V +GV+ GY+ PTPIQ + P+ ++G
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAG 63
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 35.1 bits (77), Expect = 0.052
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P+ F E + D + + ++ Y +PTP+Q PI+++GR
Sbjct: 235 PVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGR 275
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 34.7 bits (76), Expect = 0.069
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 565 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
F E N + + + +GY++PTPIQA P+A++GR
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGR 232
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P F E + D + + ++ Y +PTP+Q PI+++GR
Sbjct: 321 PANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGR 361
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P+ F P V K G++ P+PIQA WP + GR
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGR 130
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 613 MGYKEPTPIQAQGWPIAMSGR 675
MG++ PT IQAQ P+AMSG+
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQ 62
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 583 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P++V Q + +GY PT +Q Q P+ +SG+
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQ 79
>03_05_0865 - 28365430-28367640
Length = 736
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P++ + E+ + + V+ GYKEP+PIQ P+ + R
Sbjct: 313 PMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQR 353
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P+ F E + + ++ Y PTP+Q PI+++GR
Sbjct: 153 PVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGR 193
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 553 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
P + E P+ V MG+KEPT IQA+ P A+ GR
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGR 79
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 550 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 675
+PI F + P+ + ++ GY PTP+Q Q P ++ R
Sbjct: 179 DPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNR 220
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 565 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 672
FE+ + G+ G++ P+PIQ + PIA++G
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG 184
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 565 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 672
FE+ + G+ G++ P+PIQ + PIA++G
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG 161
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 565 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 672
FE+ + G+ G++ P+PIQ + PIA++G
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG 171
>01_06_0886 +
32725504-32725824,32725905-32726658,32727911-32728033,
32729477-32729535,32731427-32731732,32732006-32732236,
32732332-32732484,32732567-32732836
Length = 738
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +1
Query: 322 GLATVAIDLEDLEALVGKKNSLEGRTCDAQIGILFHSNLSTKTFMIHILQFSKDHHMKSK 501
G + + D L + + SLE D + H ++ + H+ Q ++DHH K
Sbjct: 622 GTFSPSYDYFSLVSFLDASPSLETLNLDVTNDPMKHESILGHSSKSHLRQMAEDHHCHLK 681
Query: 502 SIEI 513
++EI
Sbjct: 682 NVEI 685
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 556 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 672
+ FEE + V + MG +PT IQ G P ++G
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAG 147
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 613 MGYKEPTPIQAQGWPIAMSGR 675
MG+K PT IQA+ P A+ GR
Sbjct: 1 MGWKAPTRIQAEVIPFALQGR 21
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 604 VKTMGYKEPTPIQAQGWPIA 663
V+ +G+KEPTPIQ +P A
Sbjct: 157 VRRLGFKEPTPIQKACFPAA 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,953,411
Number of Sequences: 37544
Number of extensions: 291536
Number of successful extensions: 697
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -