Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2124
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   3.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 172 FLFATHLASVFVTVLYTSLMRIFNNNNIS*IY 267
           FLF     S+ +T  Y      FN++N++ +Y
Sbjct: 237 FLFVLSTFSICITQFYYCYDSGFNSDNLTDVY 268


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 162 LTWSRXSDDVCXLAGPMEP 106
           +TW+   DD   L GP  P
Sbjct: 367 MTWAIDMDDFHGLCGPKNP 385


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 587 LVYNSVFTSSYLYYNY 634
           L+  SVF ++YL ++Y
Sbjct: 492 LIVRSVFVTTYLMFDY 507


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 110 NPEVSGSCATTPPARALVRW 51
           +P++    A  PPAR+   W
Sbjct: 107 SPQIQTQVARPPPARSPYEW 126


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 110 NPEVSGSCATTPPARALVRW 51
           +P++    A  PPAR+   W
Sbjct: 107 SPQIQTQVARPPPARSPYEW 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,957
Number of Sequences: 336
Number of extensions: 3151
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)